BAC Information

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BAC

Clone NameB6Ng01-034H22
Chromosome7 (Build37)
Map Location 7,368,945 - 7,370,011
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1, Peg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31
Downstream geneVmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034H22.bB6Ng01-034H22.g
ACCDH863230DH863231
length1,0691,069
definitionDH863230|Mus musculus domesticus DNA, BAC clone: B6Ng01-034H22, 5' end.DH863231|Mus musculus domesticus DNA, BAC clone: B6Ng01-034H22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttacctctgagccccattttttaatgggcttatttgatt
ttctggagtccaccttcttgacttttttgtatatattggatattagtccc
ctattggatttaggattagtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgacttgcagaagctttgcaatttta
tgaggtcccatttgtctcgatcttacagcacaagccattgcggttctatt
cagggatttttctcctgtgcccatacctttgaggcttttccccactttct
cctctataagtttcagtgtccctggttttatgtggagttccttaatccac
ttcgattttactctagtacaagtagataggaatggatcaattcaaattct
tctacatgataactgccagttgtgccagcaccatttgttgaaaatactgt
cttttttccagtggatggttttagctcccttgtcaatgatcaagtgacca
tagctgtgtgggttcttttctggggtcttcagttctattcccattgggtc
tactaatctatcaatataccagtacccattcagggtttatcacaattgct
ctctagtacagctttaggtcaggcagggtgattccaccaaaggttctttt
atccttgaaaggagtttttgctaatctagagttttttgtttttccagatg
aaatttgcaaattgcttctttctaattcgttgaaaaattgaattggaatt
ttgatgaggattggattgatttgtaaattggcttttggcaaaaaaccctt
tttacttaattgatcctgcatacccggaaacagggaaaacttttccatct
cgaatctccctttaattccttccccgaagactgaattcttttcaacaaat
cttttccttcctaattagcatcacacccagggattttaattatttgtgac
tattggaaagggtgtgtgtcctaaattttttttccagccctgtttacctt
ttgagaaaaagccatggctctgttgggattatttagtacccataatctct
aaacctgattaacggataa
gaattccattaaaccgtagtttaaatatcaaatctttcttttcaacgatg
ccatcttccatgaattttcaatgagtaaaatgtggatgttaatgaagaat
gtgttccttaaagggacagtgctaatgattatatttctatgaagactgac
ttagggaagtgattgtttttgtcaatgcattttagatccatttggctccc
tttatgagaagagaattgataaatgtgaaatatttactgtagctgcaaac
actcaattgtccttttgaaaagtcgttttctagaaagcagcgtaattaaa
gcatctgcctctcattctgttttccagaattttctgagtccaggacctca
atcagaactgcacacaaagggcaatctccgaaagaaattaggttcatgca
aatgtcagtagttttacctttcccttccataactacaatataaatagcat
gttgacatagctacaagcttatttcatttcattttttatttattattact
caattttttttacagtctagtggttatccccctcctggttttcccctcct
gactcttcctcatctaacaactcctccgccatctccaagatgatatacct
acctccccaacgcccagcccttcctaatccctggggacttaagtctctct
ggggttaggtgtgtctctcccactgatgctagaccaggcagtcttatgct
gcatatttgatgggggcttcacatcagctagtgtatgatctctggttaga
ggctcaatgtctgagagatcttgcttgtccaggtttgttgagaatgctgg
tctttctatgggtcaccctcctcagcttcttacaactattcccaatttca
tccagagagtccctgggcttctgatcattgtttgattataattatatttg
tatttgacagcagaaaatgaacattttccttcatagactatcgccaataa
cttgaagaacagatgaaaaaaagtcagtaatttttatgtggtgtcctcct
aattgaaatcaaaaaaatttgtctgattcatcttgcctgattatttagtt
atctgtggttctcactaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7368945_7370011
seq2: B6Ng01-034H22.g_67_1135

seq1  GAATTCCATTAAACCGTAGTTTAAATATCAAATCTTTCTTTTCAACGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTAAACCGTAGTTTAAATATCAAATCTTTCTTTTCAACGATG  50

seq1  CCATCTTCCATGAATTTTCAATGAGTAAAATGTGGATGTTAATGAAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTCCATGAATTTTCAATGAGTAAAATGTGGATGTTAATGAAGAAT  100

seq1  GTGTTCCTTAAAGGGACAGTGCTAATGATTATATTTCTATGAAGACTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCCTTAAAGGGACAGTGCTAATGATTATATTTCTATGAAGACTGAC  150

seq1  TTAGGGAAGTGATTGTTTTTGTCAATGCATTTTAGATCCATTTGGCTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGAAGTGATTGTTTTTGTCAATGCATTTTAGATCCATTTGGCTCCC  200

seq1  TTTATGAGAAGAGAATTGATAAATGTGAAATATTTACTGTAGCTGCAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAGAAGAGAATTGATAAATGTGAAATATTTACTGTAGCTGCAAAC  250

seq1  ACTCAATTGTCCTTTTGAAAAGTCGTTTTCTAGAAAGCAGCGTAATTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAATTGTCCTTTTGAAAAGTCGTTTTCTAGAAAGCAGCGTAATTAAA  300

seq1  GCATCTGCCTCTCATTCTGTTTTCCAGAATTTTCTGAGTCCAGGACCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTGCCTCTCATTCTGTTTTCCAGAATTTTCTGAGTCCAGGACCTCA  350

seq1  ATCAGAACTGCACACAAAGGGCAATCTCCGAAAGAAATTAGGTTCATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAACTGCACACAAAGGGCAATCTCCGAAAGAAATTAGGTTCATGCA  400

seq1  AATGTCAGTAGTTTTACCTTTCCCTTCCATAACTACAATATAAATAGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCAGTAGTTTTACCTTTCCCTTCCATAACTACAATATAAATAGCAT  450

seq1  GTTGACATAGCTACAAGCTTATTTCATTTCATTTTTTATTTATTATTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACATAGCTACAAGCTTATTTCATTTCATTTTTTATTTATTATTACT  500

seq1  CAATTTTTTTTACAGTCTAGTGGTTATCCCCCTCCTGGTTTTCCCCTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTTTTTACAGTCTAGTGGTTATCCCCCTCCTGGTTTTCCCCTCCT  550

seq1  GACTCTTCCTCATCTAACAACTCCTCCGCCATCTCCAAGATGATATACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTTCCTCATCTAACAACTCCTCCGCCATCTCCAAGATGATATACCT  600

seq1  ACCTCCCCAACGCCCAGCCCTTCCTAATCCCTGGGGACTTAAGTCTCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCCCAACGCCCAGCCCTTCCTAATCCCTGGGGACTTAAGTCTCTCT  650

seq1  GGGGTTAGGTGTGTCTCTCCCACTGATGCTAGACCAGGCAGTCTTATGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTAGGTGTGTCTCTCCCACTGATGCTAGACCAGGCAGTCTTATGCT  700

seq1  GCATATTTGATGGGGGCTTCACATCAGCTAGTGTATGATCTCTGGTTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTTGATGGGGGCTTCACATCAGCTAGTGTATGATCTCTGGTTAGA  750

seq1  GGCTCAATGTCTGAGAGATCTTGCTTGTCCAGGTTTGTTGAGAATGCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAATGTCTGAGAGATCTTGCTTGTCCAGGTTTGTTGAGAATGCTGG  800

seq1  TCTTTCTATGGGTCACCCTCCTCAGCTTCTTACAACTATTCCCAA-TTCA  849
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCTTTCTATGGGTCACCCTCCTCAGCTTCTTACAACTATTCCCAATTTCA  850

seq1  TCCAGAGAGTCCCTGGGCTTCTGATCATTGTTGGA-TATAA-TATATTTG  897
      |||||||||||||||||||||||||||||||| || ||||| ||||||||
seq2  TCCAGAGAGTCCCTGGGCTTCTGATCATTGTTTGATTATAATTATATTTG  900

seq1  TATTTGACAGCAGAAAAGGAACA-TTTCCTTCATAGACTATCGGCCAATA  946
      ||||||||||||||||| ||||| |||||||||||||||||| |||||||
seq2  TATTTGACAGCAGAAAATGAACATTTTCCTTCATAGACTATC-GCCAATA  949

seq1  ACTTGAAGAACAGATGAAAAAAAGTCAGT-ATTTTTATGT-GTGTGCTCT  994
      ||||||||||||||||||||||||||||| |||||||||| |||| ||| 
seq2  ACTTGAAGAACAGATGAAAAAAAGTCAGTAATTTTTATGTGGTGTCCTCC  999

seq1  TACTTGAAATCAAAAAAATATGTTCTGATTTCATCTTTGCTGATTATTTA  1044
      || |||||||||||||||| || ||||| ||||||||  |||||||||||
seq2  TAATTGAAATCAAAAAAATTTG-TCTGA-TTCATCTTGCCTGATTATTTA  1047

seq1  GTTAGTCTGTGTTTCTCACTAAT  1067
      |||| |||||| |||||||||||
seq2  GTTA-TCTGTGGTTCTCACTAAT  1069