BAC Information

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BAC

Clone NameB6Ng01-035F13
Chromosome7 (Build37)
Map Location 9,766,838 - 9,900,091
singlet/doubletdoublet
Overlap geneEG665577, LOC665571, LOC100042083, Gm1961
Upstream geneLOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113
Downstream geneV2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139, LOC100042894, Vmn2r47, 2810047C21Rik, LOC665625, LOC545911, EG625580, LOC100042163, LOC625605, EG434117, EG628152, LOC100042921, Vmn2r52, LOC665663, V1re11, LOC628521, LOC628525
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035F13.bB6Ng01-035F13.g
ACCDH863837DH863838
length108935
definitionDH863837|Mus musculus domesticus DNA, BAC clone: B6Ng01-035F13, 5' end.DH863838|Mus musculus domesticus DNA, BAC clone: B6Ng01-035F13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,899,984 - 9,900,091)(9,766,838 - 9,767,787)
sequence
gaattcagacctggtggggtttagttttttgacatttgattagaattgtg
tgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgta
gaattcaatgctaacctggtctacagacagagttccatggacagccaggg
agggctacatggagagatcctgcctcaaacaacaacaaaaacaacacaac
ttcaaacaaaaatacaatgacagtaagaagacataacactctagcacgtt
ggttctcaacatgtggatcatgatcttttaggggatatgtaagaccatca
ggaaacacagatatttaaaggaagattcatgacagtagtgaaactacagt
tatgaggtagaaatgataatttatggctgggggtcaccataacaagagga
actgtgataaagggtcttaggattagaaagagtgagcaccactgctcttg
cacatggttgcctaaagtggaaatacagcatgactgatatgataagtggg
aaagcagctacataaatttaatcatctgaatcgacatggtaggtgaaaaa
aagtgacttttccaaattgtactctgacttgcataagtgtagggacatac
acacacacaccccttttttaggtgagtaagaactcatgaatttattgtct
tcattacaaaatcagcatagaactagatcactgtgcattggtgtttgcta
catctctgtctgcatctgtcctctttgtctctctctgtctctcagtccct
ctggttgggttggtttttgtttgctttttgagacagggttttccttgtta
gcttctggctgtctgaaacctcaccctgtagtccaggctgactttgaact
ccatcatctgcctgacatggtgtgccactgccacatggctgccaccccat
tcttttaagagtaaattaataaataatgggactgtaagactgatactttc
aggacatcgccctctgccttggctagacccacaacagggtgctccacaac
cagttagctagatctcgccactccatccagcatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_9899984_9900091
seq2: B6Ng01-035F13.b_44_151 (reverse)

seq1  TACACACACACACACACACACACACACACACACACACACACACACACAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACACACACACACACACACACACACACACACACACACACACACAGA  50

seq1  CACACACACACAATTCTAATCAAATGTCAAAAAACTAAACCCCACCAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACAATTCTAATCAAATGTCAAAAAACTAAACCCCACCAGGT  100

seq1  CTGAATTC  108
      ||||||||
seq2  CTGAATTC  108

seq1: chr7_9766838_9767787
seq2: B6Ng01-035F13.g_69_1003

seq1  GAATTCAATGCTAACCTGGTCTACAGACAGAGTTCCATGGACAGCCAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCTAACCTGGTCTACAGACAGAGTTCCATGGACAGCCAGGG  50

seq1  AGGGCTACATGGAGAGATCCTGCCTCAAACAACAACAAAAACAACACAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTACATGGAGAGATCCTGCCTCAAACAACAACAAAAACAACACAAC  100

seq1  TTCAAACAAAAATACAATGACAGTAAGAAGACATAACACTCTAGCACGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACAAAAATACAATGACAGTAAGAAGACATAACACTCTAGCACGTT  150

seq1  GGTTCTCAACATGTGGATCATGATCTTTTAGGGGATATGTAAGACCATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTCAACATGTGGATCATGATCTTTTAGGGGATATGTAAGACCATCA  200

seq1  GGAAACACAGATATTTAAAGGAAGATTCATGACAGTAGTGAAACTACAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACACAGATATTTAAAGGAAGATTCATGACAGTAGTGAAACTACAGT  250

seq1  TATGAGGTAGAAATGATAATTTATGGCTGGGGGTCACCATAACAAGAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGTAGAAATGATAATTTATGGCTGGGGGTCACCATAACAAGAGGA  300

seq1  ACTGTGATAAAGGGTCTTAGGATTAGAAAGAGTGAGCACCACTGCTCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGATAAAGGGTCTTAGGATTAGAAAGAGTGAGCACCACTGCTCTTG  350

seq1  CACATGGTTGCCTAAAGTGGAAATACAGCATGACTGATATGATAAGTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGTTGCCTAAAGTGGAAATACAGCATGACTGATATGATAAGTGGG  400

seq1  AAAGCAGCTACATAAATTTAATCATCTGAATCGACATGGTAGGTGAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGCTACATAAATTTAATCATCTGAATCGACATGGTAGGTGAAAAA  450

seq1  AAGTGACTTTTCCAAATTGTACTCTGACTTGCATAAGTGTAGGGACATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGACTTTTCCAAATTGTACTCTGACTTGCATAAGTGTAGGGACATAC  500

seq1  ACACACACACCCCTTTTTTAGGTGAGTAAGAACTCATGAATTTATTGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACCCCTTTTTTAGGTGAGTAAGAACTCATGAATTTATTGTCT  550

seq1  TCATTACAAAATCAGCATAGAACTAGATCACTGTGCATTGGTGTTTGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTACAAAATCAGCATAGAACTAGATCACTGTGCATTGGTGTTTGCTA  600

seq1  CATCTCTGTCTGCATCTGT-CTCTTTGTCTCTCTCTGTCTCTCAGTCACT  649
      ||||||||||||||||||| ||||||||||||||||||||||||||| ||
seq2  CATCTCTGTCTGCATCTGTCCTCTTTGTCTCTCTCTGTCTCTCAGTCCCT  650

seq1  CTGGTTGGTTTGTTTTTTGTTTGCTTTTTGAGACAGGGTTTCTCTGTGTA  699
      |||||||| ||| ||||||||||||||||||||||||||||  ||   ||
seq2  CTGGTTGGGTTGGTTTTTGTTTGCTTTTTGAGACAGGGTTTTCCTTGTTA  700

seq1  GC-TCTGGCTGTCCTGAAA-CTCACTCTGTAGTCCAGGCTGACCTTGAAC  747
      || ||||||||| |||||| ||||| ||||||||||||||||| ||||||
seq2  GCTTCTGGCTGT-CTGAAACCTCACCCTGTAGTCCAGGCTGACTTTGAAC  749

seq1  TCCATCATCTGCCTGACAT-GTGTGCCACTGCCACATGGCTGCAAACACC  796
      ||||||||||||||||||| |||||||||||||||||||||||  || ||
seq2  TCCATCATCTGCCTGACATGGTGTGCCACTGCCACATGGCTGC-CACCCC  798

seq1  ATCTTTATAAGAGTAAAATTAATAAATAAAATGGGACTGTAAGACTGGAT  846
      ||  || ||||||| ||||||||||||  ||||||||||||||||| |||
seq2  ATTCTTTTAAGAGT-AAATTAATAAAT--AATGGGACTGTAAGACT-GAT  844

seq1  CACTATCAGGGACATCAGCCCTCTGCCTGGGCTTAGGACCCACACACCAG  896
       ||| ||| ||||||| ||||||||||| ||||   ||||  |||| |||
seq2  -ACTTTCA-GGACATC-GCCCTCTGCCTTGGCT--AGACC--CACAACAG  887

seq1  GGTGCTGCAACAACCAGGTAAGCTAAGGATTCTCTGCCACCCCATCCAGC  946
      |||||| | ||||||| || |||||  || |||| ||||| |||||||||
seq2  GGTGCT-CCACAACCA-GTTAGCTA--GA-TCTC-GCCACTCCATCCAGC  931

seq1  ATCA  950
      ||||
seq2  ATCA  935