BAC Information

Click to search

BAC

Clone NameB6Ng01-035F14
Chromosome7 (Build37)10 (Build37)
Map Location 21,922,805 - 21,922,892104,053,903 - 104,054,363
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100042966, LOC100043533, EG435949, LOC100043536, LOC100042968, LOC100042971, EG667129, EG667135, EG435946, LOC100042976, LOC100043550, LOC667156, LOC673977, LOC667166, LOC100042980, EG381936, LOC100043559, LOC667311, LOC100043561, LOC667302, EG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953, LOC673902, EG667240, EG435951
Downstream geneGm1446, LOC381937, LOC100043588, LOC670764, EG667215, LOC100043013, LOC621561, EG667199, EG621510, LOC667186, EG628475, LOC100043595, LOC100043596, LOC667358, LOC100043016, LOC100043602, LOC100043604, EG667378, LOC100043607, LOC100043019, LOC100043025, EG667404, EG435940, LOC100043026, EG545929, LOC667421, LOC100043614, LOC667431, LOC100043029, EG620736, EG667444, LOC100043033, LOC100043037, EG667464
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035F14.bB6Ng01-035F14.g
ACCDH863839DH863840
length88473
definitionDH863839|Mus musculus domesticus DNA, BAC clone: B6Ng01-035F14, 5' end.DH863840|Mus musculus domesticus DNA, BAC clone: B6Ng01-035F14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(21,922,805 - 21,922,892)(104,053,903 - 104,054,363)
sequence
gaattcatcacttttatttatttatttatttatttatttatttatttata
ttagatattttcatttttttggggggggggaggaaagg
gaattctcacctgagtaatgccgaaaggctgagaaatacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcaaaccagtcagaatggctaagatcaaaaattcaggtgacaga
agatgctggcgttgatgtggagaaagaggaacactcctccattgttcgtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctcc
gaaaattggacatagtactactggaggatcccccaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccaatat
gttcatagcagccttatttataatagccagaagctgtaagaacctagatg
tccctcaacagaggaacgggatacaaaaagaggtgggtacatttacacaa
tggagtactactcagatattaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_21922805_21922892
seq2: B6Ng01-035F14.b_44_131

seq1  GAATTCATCACTTTTATTTATTTATTTATTTATTTATTTATTTATTTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCACTTTTATTTATTTATTTATTTATTTATTTATTTATTTATA  50

seq1  TTAGATATTTTCATTTTTTTGGGGGGGGGGAGGAAAGG  88
      ||||||||||||||||||||||||||||||||||||||
seq2  TTAGATATTTTCATTTTTTTGGGGGGGGGGAGGAAAGG  88

seq1: chr10_104053903_104054363
seq2: B6Ng01-035F14.g_67_539 (reverse)

seq1  TTTAATA----------GCTCCATTGTGTAAATGTA-CCACAT-TTTCTG  38
      |||||||           |||||||||||||||||| |||| | ||| ||
seq2  TTTAATATCTGAGTAGTACTCCATTGTGTAAATGTACCCACCTCTTTTTG  50

seq1  TAT-CTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCT  87
      ||| |  ||||||||||||||| ||||| ||||| || ||||| ||||||
seq2  TATCCCGTTCCTCTGTTGAGGGACATCTAGGTTC-TTACAGCTTCTGGCT  99

seq1  ATTATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACC  137
      ||||||||||||||||||||||| ||| ||||||||||||||||||||||
seq2  ATTATAAATAAGGCTGCTATGAACATATTGGAGCATGTGTCCTTCTTACC  149

seq1  GGTTGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCT  187
      ||||||| |||||||||||||||||||||| ||||||||||  |||||||
seq2  GGTTGGGACATCTTCTGGATATATGCCCAGGAGAGGTATTGGGGGATCCT  199

seq1  CCGGTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAG  237
      || ||||||||||||||||||||| || ||||| |||||| |||||||||
seq2  CCAGTAGTACTATGTCCAATTTTCGGAGGAACCACCAGACTGATTTCCAG  249

seq1  AGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCT  287
      ||||||||||||||| ||||||||||| ||||||||||||||||||||||
seq2  AGTGGTTGTACAAGCTTGCAATCCCACGAACAATGGAGGAGTGTTCCTCT  299

seq1  TTCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAG  337
      |||||||||||  ||||||||||| |||||||||||||||||||||||||
seq2  TTCTCCACATCAACGCCAGCATCTTCTGTCACCTGAATTTTTGATCTTAG  349

seq1  CCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATT  387
      |||||||||||||| |||| ||||||||||||||||||||||||||||||
seq2  CCATTCTGACTGGTTTGAGATGGAATCTCAGGGTTGTTTTGATTTGCATT  399

seq1  TCCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCAT  437
      || ||||||||||||||||||||||||||||||||||  ||||| ||| |
seq2  TCTCTGATGATTAAGGATGTTGAACATTTTTTCAGGTATTTCTCAGCCTT  449

seq1  TCGGTATTCCTCAGGTGAGAATTC  461
      |||| ||| |||||||||||||||
seq2  TCGGCATTACTCAGGTGAGAATTC  473