BAC Information

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BAC

Clone NameB6Ng01-035O21
Chromosome7 (Build37)
Map Location 144,862,924 - 144,976,215
singlet/doubletdoublet
Overlap genenone
Upstream geneEG621677, EG668771, Mgmt, EG621804, Ebf3, 9430038I01Rik, Txnl2
Downstream geneLOC435235, Tcerg1l, LOC100043290
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035O21.bB6Ng01-035O21.g
ACCDH864267DH864268
length853920
definitionDH864267|Mus musculus domesticus DNA, BAC clone: B6Ng01-035O21, 5' end.DH864268|Mus musculus domesticus DNA, BAC clone: B6Ng01-035O21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(144,862,924 - 144,863,790)(144,975,293 - 144,976,215)
sequence
gaattcaatagaacatatacctttagtacacaagactgttcaatattggt
tgagatatgagccttaggccagtggagctgggcaggcttctagacctggg
gctgagtgaactgtccgtggtcctgccctgggaaaggactcggtggctcc
atggctcgagctcatagatctgcttggtgcatatggtgctcattggcaat
cttcacccaaacaaagatctcagtcatcctgaaagaaagtgccttctacc
atcccttgtccctggaaaggatttcactggagaagagtggcagccatacg
acctcagttggggtgcttgcttcaggcagcaggggaagaaagattgtgcc
cagagaccaggagtggcttggagcctgcgattttgtccttttgttaaggt
gctaggagctgtggctcatatactctggatctcccaggtatacctaagag
gtatgtccttctccagagtccaataattccaaaggctgtcttctaattat
caacagttttaaaagaagggtgggggccactctataaaccataccccact
ttctagagtcttttaggatcataggaaatttcagttatgcttgttggaag
attcagtacctaatctcaccaaccatgctgggtagctactcgctcagact
actaagatatgcaaagacattggaggggggagggcttttgttatgtttgc
attgacttttcttagcccaatttgtagatggcaggacattgagaggatta
tctgctctgtgaaacatttctccacgaggacaagcaggtctaggggtccc
tagtacctagcatgaaccagttcatggttgctttcatatgtgttgtgctc
aca
gaattccatagagagatgttgttcttttgagagaatctttttacattaga
aatttaggtgagacatcctgccaactaaacgagatgcctccctcatataa
attcattgataaaagcagaggatgtatagacatttgatgaaacaagggat
gccttagagtagacccgaatcctcttagatgtgtcacagaggcacagaga
tggaggcagtggacaggaacatctcagtgtcccaccatctatctgcacat
gggacactgaggcccactgtaagttgacacagttctgggaatacctggca
agatggttgccaaagtccagcctgatgaccctgtactcctggttcaagag
cagagtctgtagggaccagaaaggccaccagagggcagcagatgtatcac
aaggagctggctcagatataccttgacttggggaggggtatccctagaag
ttcccccaattgagtctcttactgtttttcttttccctgcagaaactaca
tattgaactttttttgaaaaggaaaagaaaggaggtcttagaagaaatgg
acagaaagtctagcacatcccaggaaagggacgcttgccttcccctacat
gaaaacctctgaacccaacctttctacaaacttttattttctcagctcac
ttgtgtgataaaacaataaattacaggcaatggtctcaaaatctttcctg
ccttaaatatctccccacactatgctgctccataattaaaaaacaacata
gctggtatgggacatgttcatggttttctccggggtagctacggttcctc
atccctttggcacagggactcatggccaaaagccaggctttgtcccaaca
gaccctctatggctccatcaggcgaacagggtgagtacccactgattcca
gcaatctgtgagctggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_144862924_144863790
seq2: B6Ng01-035O21.b_46_898

seq1  GAATTCAATAGAACATATACCTTTAGTACACAAGACTGTTCAATATTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAGAACATATACCTTTAGTACACAAGACTGTTCAATATTGGT  50

seq1  TGAGATATGAGCCTTAGGCCAGTGGAGCTGGGCAGGCTTCTAGACCTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATATGAGCCTTAGGCCAGTGGAGCTGGGCAGGCTTCTAGACCTGGG  100

seq1  GCTGAGTGAACTGTCCGTGGTCCTGCCCTGGGAAAGGACTCGGTGGCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTGAACTGTCCGTGGTCCTGCCCTGGGAAAGGACTCGGTGGCTCC  150

seq1  ATGGCTCGAGCTCATAGATCTGCTTGGTGCATATGGTGCTCATTGGCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCGAGCTCATAGATCTGCTTGGTGCATATGGTGCTCATTGGCAAT  200

seq1  CTTCACCCAAACAAAGATCTCAGTCATCCTGAAAGAAAGTGCCTTCTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACCCAAACAAAGATCTCAGTCATCCTGAAAGAAAGTGCCTTCTACC  250

seq1  ATCCCTTGTCCCTGGAAAGGATTTCACTGGAGAAGAGTGGCAGCCATACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTTGTCCCTGGAAAGGATTTCACTGGAGAAGAGTGGCAGCCATACG  300

seq1  ACCTCAGTTGGGGTGCTTGCTTCAGGCAGCAGGGGAAGAAAGATTGTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGTTGGGGTGCTTGCTTCAGGCAGCAGGGGAAGAAAGATTGTGCC  350

seq1  CAGAGACCAGGAGTGGCTTGGAGCCTGCGATTTTGTCCTTTTGTTAAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACCAGGAGTGGCTTGGAGCCTGCGATTTTGTCCTTTTGTTAAGGT  400

seq1  GCTAGGAGCTGTGGCTCATATACTCTGGATCTCCCAGGTATACCTAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGAGCTGTGGCTCATATACTCTGGATCTCCCAGGTATACCTAAGAG  450

seq1  GTATGTCCTTCTCCAGAGTCCAATAATTCCAAAGGCTGTCTTCTAATTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTCCTTCTCCAGAGTCCAATAATTCCAAAGGCTGTCTTCTAATTAT  500

seq1  CAACAGTTTTAAAAGAAGGGTGGGGGCCACTCTATAAACCATACCCCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTTTTAAAAGAAGGGTGGGGGCCACTCTATAAACCATACCCCACT  550

seq1  TTCTAGAGTCTTTTAGGATCATAGGAAATTTCAGTTATGCTTGTTGGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAGTCTTTTAGGATCATAGGAAATTTCAGTTATGCTTGTTGGAAG  600

seq1  ATTCAGTACCTAATCTCACCAACCATGCTGGGTAGCTACTCGCTCAGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTACCTAATCTCACCAACCATGCTGGGTAGCTACTCGCTCAGACT  650

seq1  ACTAAGATATGCAAAGACATTGGAGGGGGGAGGGCTTTTGTTATGTTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGATATGCAAAGACATTGGAGGGGGGAGGGCTTTTGTTATGTTTGC  700

seq1  ATTGACTTTTCTTAGCCAAATTTGTAGGATGGCAAGGACATTGAAGAGGA  750
      ||||||||||||||||| |||||||| |||||| ||||||||| ||||||
seq2  ATTGACTTTTCTTAGCCCAATTTGTA-GATGGC-AGGACATTG-AGAGGA  747

seq1  TTTATCTGCTCTGTGAAACAATTTCTCCACGAGGGACAAAGCAGGGTCTA  800
       |||||||||||||||||| |||||||||||| |||| ||||| ||||||
seq2  -TTATCTGCTCTGTGAAAC-ATTTCTCCACGA-GGAC-AAGCA-GGTCTA  792

seq1  TGGGGTCCCTAGTACCTAGCATGAAACCAGGTGCATGGTTTGCTTTCATA  850
       |||||||||||||||||||||| ||||| || ||||| |||||||||||
seq2  -GGGGTCCCTAGTACCTAGCATG-AACCA-GTTCATGG-TTGCTTTCATA  838

seq1  TGTTGTTGTTGCTCACA  867
      || ||||| ||||||||
seq2  TG-TGTTG-TGCTCACA  853

seq1: chr7_144975293_144976215
seq2: B6Ng01-035O21.g_66_985 (reverse)

seq1  CCCA-CAGCTCACTGGGTTGCTGGGATCAGTGGGTACTCA-CCTGTGTCG  48
      |||| ||||||||  | ||||||| ||||||||||||||| ||||| |||
seq2  CCCACCAGCTCAC-AGATTGCTGGAATCAGTGGGTACTCACCCTGT-TCG  48

seq1  CCTGATGGAGGCATAGAGGGTCTGTTGGGACAAAGCCTGGCTCTTGGCCA  98
      |||||||||| ||||||||||||||||||||||||||||||| |||||||
seq2  CCTGATGGAGCCATAGAGGGTCTGTTGGGACAAAGCCTGGCTTTTGGCCA  98

seq1  TGAGGTCCTGTGCCAAAGGGATGAGGAACCGGTAGCTACCCCGGAAGAAA  148
      ||||  |||||||||||||||||||||||| ||||||||||||| |||||
seq2  TGAGTCCCTGTGCCAAAGGGATGAGGAACC-GTAGCTACCCCGG-AGAAA  146

seq1  ACCATGAACATGTCACAGTACCAGCTATGTTGTATTTTTAATTTATGGAG  198
      |||||||||||||| || ||||||||||||||| ||||||| ||||||||
seq2  ACCATGAACATGTCCCA-TACCAGCTATGTTGT-TTTTTAA-TTATGGAG  193

seq1  CAGCATAGTTGTGGGGAGATATTTTAAGGCAGGAAAGATTTTGAGACCAT  248
      |||||||| |||||||||||| ||||||||||||||||||||||||||||
seq2  CAGCATAG-TGTGGGGAGATA-TTTAAGGCAGGAAAGATTTTGAGACCAT  241

seq1  TGCCTGTAATTTATTG-TTTATCACACAAGTGAGCTGAG-AAATTAAAGT  296
      |||||||||||||||| |||||||||||||||||||||| |||| |||||
seq2  TGCCTGTAATTTATTGTTTTATCACACAAGTGAGCTGAGAAAATAAAAGT  291

seq1  TTGTAGAAAGGTT-GGTTCAGAGGTTTTCATGTAGGGG-AGGCAAGCGTC  344
      ||||||||||||| |||||||||||||||||||||||| |||||||||||
seq2  TTGTAGAAAGGTTGGGTTCAGAGGTTTTCATGTAGGGGAAGGCAAGCGTC  341

seq1  CCTTTCCTGGGATGTGCTAGACTTTCTGTCCATTTCTTCTAAGACCTCCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCTGGGATGTGCTAGACTTTCTGTCCATTTCTTCTAAGACCTCCT  391

seq1  TTCTTTTCCTTTTCAAAAAAAGTTCAATATGTAGTTTCTGCAGGGAAAAG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCCTTTTCAAAAAAAGTTCAATATGTAGTTTCTGCAGGGAAAAG  441

seq1  AAAAACAGTAAGAGACTCAATTGGGGGAACTTCTAGGGATACCCCTCCCC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGTAAGAGACTCAATTGGGGGAACTTCTAGGGATACCCCTCCCC  491

seq1  AAGTCAAGGTATATCTGAGCCAGCTCCTTGTGATACATCTGCTGCCCTCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAAGGTATATCTGAGCCAGCTCCTTGTGATACATCTGCTGCCCTCT  541

seq1  GGTGGCCTTTCTGGTCCCTACAGACTCTGCTCTTGAACCAGGAGTACAGG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCCTTTCTGGTCCCTACAGACTCTGCTCTTGAACCAGGAGTACAGG  591

seq1  GTCATCAGGCTGGACTTTGGCAACCATCTTGCCAGGTATTCCCAGAACTG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCAGGCTGGACTTTGGCAACCATCTTGCCAGGTATTCCCAGAACTG  641

seq1  TGTCAACTTACAGTGGGCCTCAGTGTCCCATGTGCAGATAGATGGTGGGA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAACTTACAGTGGGCCTCAGTGTCCCATGTGCAGATAGATGGTGGGA  691

seq1  CACTGAGATGTTCCTGTCCACTGCCTCCATCTCTGTGCCTCTGTGACACA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGATGTTCCTGTCCACTGCCTCCATCTCTGTGCCTCTGTGACACA  741

seq1  TCTAAGAGGATTCGGGTCTACTCTAAGGCATCCCTTGTTTCATCAAATGT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGAGGATTCGGGTCTACTCTAAGGCATCCCTTGTTTCATCAAATGT  791

seq1  CTATACATCCTCTGCTTTTATCAATGAATTTATATGAGGGAGGCATCTCG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACATCCTCTGCTTTTATCAATGAATTTATATGAGGGAGGCATCTCG  841

seq1  TTTAGTTGGCAGGATGTCTCACCTAAATTTCTAATGTAAAAAGATTCTCT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTGGCAGGATGTCTCACCTAAATTTCTAATGTAAAAAGATTCTCT  891

seq1  CAAAAGAACAACATCTCTCTATGGAATTC  923
      |||||||||||||||||||||||||||||
seq2  CAAAAGAACAACATCTCTCTATGGAATTC  920