BAC Information

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BAC

Clone NameB6Ng01-036L03
Chromosome7 (Build37)
Map Location 110,926,764 - 111,060,031
singlet/doubletdoublet
Overlap geneOlfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65
Upstream geneOlfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69
Downstream geneOlfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036L03.bB6Ng01-036L03.g
ACCDH864784DH864785
length945792
definitionDH864784|Mus musculus domesticus DNA, BAC clone: B6Ng01-036L03, 5' end.DH864785|Mus musculus domesticus DNA, BAC clone: B6Ng01-036L03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,926,764 - 110,927,879)(111,059,135 - 111,060,031)
sequence
gaattccaatccagcactgcactgactccaggccagggatccccactagt
gttaacacagaaggcatgaagactgagccattgaacttgatcatggtgag
ctcagaaacgtgtagcagtattgctgcttcaacttctgctacatgctaag
actagatgcattgaatttaagagaaattaattcattagcaaaacataatc
taagtaggttagaagtaaaccaccctctctttattatctcaggttctctt
aattttgtcatttccaactgggtttaaaaattagccagtaaattttaaac
ttataattattttaatcatttcgagttagtgaagacaaaattgctctgtg
gcctatttctgccacaagaaaacgtctccccaaaattctcattttttact
tattatctgtttttgtgcatcattatggatttctaagtgaaatttatagc
atgaagatattatatgatttcacctatactaaacacagacaatacactag
agtgcaagaattctcagtcttctcaaaagaaggctagaattttttggttt
tgtttttgttttttctggattatctttcaggtctatagctcactgctggg
catctgaaggtggtctctattaaaagtctctctagagttgcactcatatt
aatcttttcaaaatttggtgttcggggttcccaatggaggagttagagaa
aggactaaaggagctgaagggtttgcaaccccataggaagaacaacaata
tcaaacaaccagacttcttagagctcccaggatgaaaccaccaaccaaag
agtacacaatgaggaacccatggctcagttacatttgtagctgaggatgg
cattggctggcatcaataagagagaaaccctggtctttgatgcttgatgc
ccagtgtataggaaaggatacatttgagatgcatcacataataga
gaattccatcatattagcaactgctcacaattctttctcagacataaacc
cctgattttctagcaatctcactagaaaccccatttatagggaaaaggca
tgtgtcaaaccttttgtgcaaccttagtgttatttctgtatcagagaaca
tctttagagagatcttacataactcccatatttaaaaggtttatttttct
aagtaatgttttgagatgcaactgtagagtcaaaatgatacacatggcta
agacaattaattgcttactcttttggagaaaccagtacttacagttgaat
gcgtttaatttttgatctccctaccttgggatgccccttccctgacttgg
ttttgaagcacttttttctgaatgcctccttttatctcatccttcataca
caagcctatattaaaataccttgaaagatgaacatctctgattcactgaa
ctgtaaagtcctggaaattctcttcagagttgaagctacaaactctaatt
cggctagaatctaagtttctaaaagtctcaaggatatctccctttactga
gggcagtagtgtgcagctgtgctctgtcctgtgtgcagctgtgctcctgt
cctgtgtgcagctgtgctctgtcctgtgtgcagctgtgctcctgtcctgt
gtgcagctgtgctctgccctgtgtgcagctgtgttcctgttcttatgtgc
agctgtctctgtctgtggtgcagctgtgctcctgtctgtgtgcagctggc
tctgtctgggcactgtgctcctgtctgtatgcagctggctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_110926764_110927879
seq2: B6Ng01-036L03.b_48_992

seq1  GAATTCCAATCCAGCACTGCACTGACTCCAGGCCAGGGATCCCCACTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATCCAGCACTGCACTGACTCCAGGCCAGGGATCCCCACTAGT  50

seq1  GTTAACACAGAAGGCATGAAGACTGAGCCATTGAACTTGATCATGGTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACACAGAAGGCATGAAGACTGAGCCATTGAACTTGATCATGGTGAG  100

seq1  CTCAGAAACGTGTAGCAGTATTGCTGCTTCAACTTCTGCTACATGCTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAACGTGTAGCAGTATTGCTGCTTCAACTTCTGCTACATGCTAAG  150

seq1  ACTAGATGCATTGAATTTAAGAGAAATTAATTCATTAGCAAAACATAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGATGCATTGAATTTAAGAGAAATTAATTCATTAGCAAAACATAATC  200

seq1  TAAGTAGGTTAGAAGTAAACCACCCTCTCTTTATTATCTCAGGTTCTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAGGTTAGAAGTAAACCACCCTCTCTTTATTATCTCAGGTTCTCTT  250

seq1  AATTTTGTCATTTCCAACTGGGTTTAAAAATTAGCCAGTAAATTTTAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGTCATTTCCAACTGGGTTTAAAAATTAGCCAGTAAATTTTAAAC  300

seq1  TTATAATTATTTTAATCATTTCGAGTTAGTGAAGACAAAATTGCTCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATTATTTTAATCATTTCGAGTTAGTGAAGACAAAATTGCTCTGTG  350

seq1  GCCTATTTCTGCCACAAGAAAACGTCTCCCCAAAATTCTCATTTTTTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATTTCTGCCACAAGAAAACGTCTCCCCAAAATTCTCATTTTTTACT  400

seq1  TATTATCTGTTTTTGTGCATCATTATGGATTTCTAAGTGAAATTTATAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCTGTTTTTGTGCATCATTATGGATTTCTAAGTGAAATTTATAGC  450

seq1  ATGAAGATATTATATGATTTCACCTATACTAAACACAGACAATACACTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGATATTATATGATTTCACCTATACTAAACACAGACAATACACTAG  500

seq1  AGTGCAAGAATTCTCAGTCTTCTCAAAAGAAGGCTAGAATTTTTTGGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAAGAATTCTCAGTCTTCTCAAAAGAAGGCTAGAATTTTTTGGTTT  550

seq1  TGTTTTTGTTTTTTCTGGATTATCTTTCAGGTCTATAGCTCAACTGCT-G  599
      ||||||||||||||||||||||||||||||||||||||||| |||||| |
seq2  TGTTTTTGTTTTTTCTGGATTATCTTTCAGGTCTATAGCTC-ACTGCTGG  599

seq1  GCATCTG-AGGTGGTCTCTATTAAAAGTCTCTCTAGAGTTGCACTCATAT  648
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTGAAGGTGGTCTCTATTAAAAGTCTCTCTAGAGTTGCACTCATAT  649

seq1  TAATCTTTTCAAAATTTGGTGTTCGGGGTTCCCAATGAAGGAGTTAGAGA  698
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TAATCTTTTCAAAATTTGGTGTTCGGGGTTCCCAATGGAGGAGTTAGAGA  699

seq1  AAGGACTAAAGGAGCTGAAGGGGTTTGCAACCCCATAGGAAGAACAACAA  748
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAGGACTAAAGGAGCTGAA-GGGTTTGCAACCCCATAGGAAGAACAACAA  748

seq1  TATCAAACAACCAGACCTCTTAGAGCTCCCAGGGATGAAACCACCAACCA  798
      |||||||||||||||| |||||||||||||| ||||||||||||||||||
seq2  TATCAAACAACCAGACTTCTTAGAGCTCCCA-GGATGAAACCACCAACCA  797

seq1  AAGAGTACACAATGAGGAACCCATGGCTCCAGTTACATATGTAGCTGAGG  848
      |||||||||||||||||||||||||||| ||||||||| |||||||||||
seq2  AAGAGTACACAATGAGGAACCCATGGCT-CAGTTACATTTGTAGCTGAGG  846

seq1  ATGGCATTGGCTGGCATCAATAAGAGGAGAAACCCTTGGTCCTTTGAATG  898
      ||||||||||||||||||||||||| ||||||||| |||| ||||| |||
seq2  ATGGCATTGGCTGGCATCAATAAGA-GAGAAACCC-TGGT-CTTTG-ATG  892

seq1  CTTGATGCCCCAGTGTATAGGAAAAGGGATAACATTTGAGATGCAATCAC  948
      ||||||| ||||||||||||||||  |||| ||||||||||||| |||||
seq2  CTTGATG-CCCAGTGTATAGGAAA--GGAT-ACATTTGAGATGC-ATCAC  937

seq1  ATAAAATAAGAATACATAAAAAAGAATAAGCAAAAAAATTGGTGCTTTCC  998
      |||| | |                                          
seq2  ATAATAGA------------------------------------------  945

seq1  TGAAACTAATCATTTATTTTATACATTCTGCCAATCCTATGAGAACTTTT  1048
                                                        
seq2  --------------------------------------------------  945

seq1  AACAATAAATAGTTAATAGTTCAAGGAAGAACGAACACATTTACATGATA  1098
                                                        
seq2  --------------------------------------------------  945

seq1  TGAGAAAAACATAATAGA  1116
                        
seq2  ------------------  945

seq1: chr7_111059135_111060031
seq2: B6Ng01-036L03.g_67_858 (reverse)

seq1  AGAGCACAGCTGCATACAGGACAGGAGCACAGCTGCACACAGGACAGGAG  50
                                                        
seq2  --------------------------------------------------  0

seq1  CACAGCTGCACACAGGACAGGAGCACAGCTGCACACAGGACAGGAGCACA  100
                                                 |||| ||
seq2  ------------------------------------------AGAGC-CA  7

seq1  GCTGCATACAGGACAGGAGCACAGCTGCACACAGGACAGGAGCACAGCTG  150
      |||||||||| ||||||||||||| ||| ||   |||| |||| ||||||
seq2  GCTGCATACA-GACAGGAGCACAG-TGCCCA---GACA-GAGC-CAGCTG  50

seq1  CACACAGGACAGGAGCACAGCTGCA-CACAGGACAGGAGCACAGCTGCAC  199
      |||||| |||||||||||||||||| |||| |||| ||| ||||||||||
seq2  CACACA-GACAGGAGCACAGCTGCACCACA-GACA-GAG-ACAGCTGCAC  96

seq1  AT-AGGACAGGAACACAGCTGCACACAGGGCAGGAGCACAGCTGCACACA  248
      || || |||||||||||||||||||||||||| |||||||||||||||||
seq2  ATAAGAACAGGAACACAGCTGCACACAGGGCA-GAGCACAGCTGCACACA  145

seq1  GGACAGGAGCACAGCTGCACACAGGACAAGAGCACAGCTGCACACAGGAC  298
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGACAGGAGCACAGCTGCACACAGGAC-AGAGCACAGCTGCACACAGGAC  194

seq1  AGGAGCACAGCTGCACACAGGACAAGAGCACAGCTGCACACTACTGCCCT  348
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGGAGCACAGCTGCACACAGGAC-AGAGCACAGCTGCACACTACTGCCCT  243

seq1  CAGTAAAGGGAGATATCCTTGAGACTTTTAGAAACTTAGATTCTAGCCGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAGGGAGATATCCTTGAGACTTTTAGAAACTTAGATTCTAGCCGA  293

seq1  ATTAGAGTTTGTAGCTTCAACTCTGAAGAGAATTTCCAGGACTTTACAGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGTTTGTAGCTTCAACTCTGAAGAGAATTTCCAGGACTTTACAGT  343

seq1  TCAGTGAATCAGAGATGTTCATCTTTCAAGGTATTTTAATATAGGCTTGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGAATCAGAGATGTTCATCTTTCAAGGTATTTTAATATAGGCTTGT  393

seq1  GTATGAAGGATGAGATAAAAGGAGGCATTCAGAAAAAAGTGCTTCAAAAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAAGGATGAGATAAAAGGAGGCATTCAGAAAAAAGTGCTTCAAAAC  443

seq1  CAAGTCAGGGAAGGGGCATCCCAAGGTAGGGAGATCAAAAATTAAACGCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCAGGGAAGGGGCATCCCAAGGTAGGGAGATCAAAAATTAAACGCA  493

seq1  TTCAACTGTAAGTACTGGTTTCTCCAAAAGAGTAAGCAATTAATTGTCTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTGTAAGTACTGGTTTCTCCAAAAGAGTAAGCAATTAATTGTCTT  543

seq1  AGCCATGTGTATCATTTTGACTCTACAGTTGCATCTCAAAACATTACTTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGTGTATCATTTTGACTCTACAGTTGCATCTCAAAACATTACTTA  593

seq1  GAAAAATAAACCTTTTAAATATGGGAGTTATGTAAGATCTCTCTAAAGAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATAAACCTTTTAAATATGGGAGTTATGTAAGATCTCTCTAAAGAT  643

seq1  GTTCTCTGATACAGAAATAACACTAAGGTTGCACAAAAGGTTTGACACAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTGATACAGAAATAACACTAAGGTTGCACAAAAGGTTTGACACAT  693

seq1  GCCTTTTCCCTATAAATGGGGTTTCTAGTGAGATTGCTAGAAAATCAGGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTCCCTATAAATGGGGTTTCTAGTGAGATTGCTAGAAAATCAGGG  743

seq1  GTTTATGTCTGAGAAAGAATTGTGAGCAGTTGCTAATATGATGGAATTC  897
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGTCTGAGAAAGAATTGTGAGCAGTTGCTAATATGATGGAATTC  792