BAC Information

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BAC

Clone NameB6Ng01-040M05
Chromosome7 (Build37)
Map Location 9,433,264 - 9,434,016
singlet/doubletsinglet
Overlap geneLOC100042790
Upstream geneLOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552
Downstream geneLOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083, Gm1961, V2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139, LOC100042894, Vmn2r47
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-040M05.bB6Ng01-040M05.g
ACCDH867629DH867630
length9951,059
definitionDH867629|Mus musculus domesticus DNA, BAC clone: B6Ng01-040M05, 5' end.DH867630|Mus musculus domesticus DNA, BAC clone: B6Ng01-040M05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactctgtagatcatgctggccataaactatgaaatctgcctgcc
tcttcttcccaaatgcctcggttaaaggcatgaaccatcactgcccagct
gcctttagcttaatacaagtgtgacaagtaaagccttactaattaaaact
gcttttatattacagttgtttgttatattattagggttgaagattgaaat
atactcccatttttatggtgattttgtatttgtggattttttcaatttta
taaattggagatttcacttatttacatttcaaattttgtcccctttcact
atttcccttctgcaaatccactatgccatccccccttaccctgcttctat
gagggtgctcccctacccacatacccactcttgcttcagcacccaagcat
tcatctacactggggaatcaagccttcacaggaccaaaggactcccctcc
cattgatgacagatagggagctttaactacttcagtccttcccctaacac
ctccattggagtctctgtgcacagtccaatggttgactgtgagcatccac
atctgtattggtcaggatctggcagagcctcctaggagacagctgtatca
gtctcctgtccacaagcacttcttgccatccacaatagtgtctgagtttg
gtatctgcatttgtgatcgatcttcaggtggggcaggctgtgtatggcct
ttaattcagtctctgatcttctctttgtcccattatttccaatagatagg
aacaattctgagttaaaattttgtagatgtgtgggtggtcctatccctca
actgggagccatgcctaacctctggctattgtctcgacagattctccttc
ctgattctgggatatttcatctaatatcatcgctgtacatcctgggatgc
tcttgatttcctggcatctgggactttctggttgctacaacagttcccgt
ccctagttgctacacaactctgttcaatttctgacctctgtacag
gaattctttgtttagatctgagccccatttttaatgcggttatttgattt
tctggagtccaccctcttgatttctttatatatatattggataatagtcc
cctaactgatttaggacaggtaaagttcctttcccaatctgttggtagcc
tttttgtcttattgacggtgtcttttgccttgtagaagtttgtagtttca
tgaggtcccatttctcaattctcgatcatatagcacaagccattgctgtt
ctattcaggaatttttcctctgtgcccttatcttcgaggcttttccccac
ttaatcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataggaatggatagattcgc
attcttctaaatgttaacaaccagttgtgccagcactatttgttgaaaag
ctgtctttcttccactcgatggttttagctcccttgtcgaagatcaagtg
accataggtgtgtgggttcatttttgggtcttcaattctattccattttt
ctacttgtctgtcactataccagtaccatgcatttttatcacaattgctc
tgtagtaaagctttaggttaggcatgctgattccaccagaggttctttta
tccttgtgaagagtttttgctatcgtaggttttttgttatttcagatgaa
tttgcagattgctctttttaattcgttgaagatttgagatggaattttaa
tggggattgcattgaatctgtagattgcttttggcaagaaagccattttt
acaatgttgatcctgccaatccatgagcatttggagatctttccatcttc
tcagagattctttaatttctttcttcagagacttgaagttcttatcatac
agattattcacttttcatagttaaatacacgccaagatattttttatatt
gtgactattagacggagtgttgcctaatttcttttcagcccttatcttgt
gtaaagaaagaccttggcttgatgagtaattttattcagctcttcccgag
ctgtctcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_9433264_9434016
seq2: B6Ng01-040M05.b_42_794

seq1  GAATTCACTCTGTAGATCATGCTGGCCATAAACTATGAAATCTGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGATCATGCTGGCCATAAACTATGAAATCTGCCTGCC  50

seq1  TCTTCTTCCCAAATGCCTCGGTTAAAGGCATGAACCATCACTGCCCAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCCCAAATGCCTCGGTTAAAGGCATGAACCATCACTGCCCAGCT  100

seq1  GCCTTTAGCTTAATACAAGTGTGACAAGTAAAGCCTTACTAATTAAAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTAGCTTAATACAAGTGTGACAAGTAAAGCCTTACTAATTAAAACT  150

seq1  GCTTTTATATTACAGTTGTTTGTTATATTATTAGGGTTGAAGATTGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTATATTACAGTTGTTTGTTATATTATTAGGGTTGAAGATTGAAAT  200

seq1  ATACTCCCATTTTTATGGTGATTTTGTATTTGTGGATTTTTTCAATTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCCCATTTTTATGGTGATTTTGTATTTGTGGATTTTTTCAATTTTA  250

seq1  TAAATTGGAGATTTCACTTATTTACATTTCAAATTTTGTCCCCTTTCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGGAGATTTCACTTATTTACATTTCAAATTTTGTCCCCTTTCACT  300

seq1  ATTTCCCTTCTGCAAATCCACTATGCCATCCCCCCTTACCCTGCTTCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCTTCTGCAAATCCACTATGCCATCCCCCCTTACCCTGCTTCTAT  350

seq1  GAGGGTGCTCCCCTACCCACATACCCACTCTTGCTTCAGCACCCAAGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTGCTCCCCTACCCACATACCCACTCTTGCTTCAGCACCCAAGCAT  400

seq1  TCATCTACACTGGGGAATCAAGCCTTCACAGGACCAAAGGACTCCCCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTACACTGGGGAATCAAGCCTTCACAGGACCAAAGGACTCCCCTCC  450

seq1  CATTGATGACAGATAGGGAGCTTTAACTACTTCAGTCCTTCCCCTAACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATGACAGATAGGGAGCTTTAACTACTTCAGTCCTTCCCCTAACAC  500

seq1  CTCCATTGGAGTCTCTGTGCACAGTCCAATGGTTGACTGTGAGCATCCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTGGAGTCTCTGTGCACAGTCCAATGGTTGACTGTGAGCATCCAC  550

seq1  ATCTGTATTGGTCAGGATCTGGCAGAGCCTCCTAGGAGACAGCTGTATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTATTGGTCAGGATCTGGCAGAGCCTCCTAGGAGACAGCTGTATCA  600

seq1  GTCTCCTGTCCACAAGCACTTCTTGCCATCCACAATAGTGTCTGAGTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTGTCCACAAGCACTTCTTGCCATCCACAATAGTGTCTGAGTTTG  650

seq1  GTATCTGCATTTGTGATCGATCTTCAGGTGGGGCAGGCTGTGTATGGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTGCATTTGTGATCGATCTTCAGGTGGGGCAGGCTGTGTATGGCCT  700

seq1  TTAATTCAGTCTCTGATCTTCTCTTTGTCCCATTATTTCCAATAGATAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCAGTCTCTGATCTTCTCTTTGTCCCATTATTTCCAATAGATAGG  750

seq1  AAC  753
      |||
seq2  AAC  753