BAC Information

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BAC

Clone NameB6Ng01-042F16
Chromosome7 (Build37)
Map Location 111,752,366 - 111,823,094
singlet/doubletdoublet
Overlap geneOlfr656, Olfr657, Olfr658, LOC667882, Olfr659
Upstream geneOlfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655
Downstream geneGA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn, Trim3, Arfip2, Fxc1, Dnhd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042F16.bB6Ng01-042F16.g
ACCDH868757DH868758
length6101,139
definitionDH868757|Mus musculus domesticus DNA, BAC clone: B6Ng01-042F16, 5' end.DH868758|Mus musculus domesticus DNA, BAC clone: B6Ng01-042F16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,822,485 - 111,823,094)(111,752,366 - 111,753,515)
sequence
gaattccacttctacatgctgtactgacttccttatttcattcagctgtt
tgtgtgtattctcttggaattcaaccaagggattttttcttctgtatgag
ttctttaaatgtattcattaattattctttagaattgtgttggtttcatt
taattcactcttgttggaagacatcattgtgaaaccagtagtttatgtct
tcatttattttcatgtttcttatgttgttgtattgggcagtgtgtaggat
attgattgcatttttaaagcatattcaatcaaagaaagagcttgccacat
caagagggtgtaagttgtactgggcttaagatgtcattttcatactaagc
aggaattcatggcagtagaattagtctcctgaaagtagaatactgcctat
aataatgatcagtatcaaaattcatgtccactagaaatatatagtgacta
agaaataacaagtaatcactctttaagccccaatctatttaggctattta
ctaaagtaacactcatagtatagcttacatttaggtatttgttactgtgg
ctatgagtggaaagcaagattaggaggatgaatggtagaaggaagaggag
gaggaggagc
gaattctctgggaagatatagcaggtcagatacatggtaactgaacacag
gtgaccagccacatgacagaatataggtcagaataaatgggatattttaa
gttatatctagttagagaatagcctagctatatggccaaggtttttgtaa
atatattttgagtctcaatcatatttctgggagcatggggttgggaggaa
gaatcaaggactaacttctacaaaaatatattgtctgaaaaaacattttt
ttttaaataaaaaccaaaaccccaaacaaacaaaaaagagcacttcctgg
tctctagaggacatgggaggggtccctgctccccttcagtaggctcgaaa
cagtctgtagctacatttccactcaattttatgctttcttccggtttctg
taggcacccctgcttctacccacatgaggtaggcactctctgtggtggtg
taaatgaaagtggcctctacaagttcacgtacttgaatgcttgctcctca
gttgctagaactgtttgggaaacattaggaaaagttgcctcgttggaaaa
ggtgtgtcactggtggtagactttgaggtttcaaaaaggattgaaattat
agaatagtttcgtaattttcactctatctgaagctcgaggactacctgta
ttatttaactggtttaaagtacactaattctgtcagttaactctgttata
atctcacaaatgcctattgtagaatttagtggttgaaaaccttattctat
agtataatattgtttagaacatgacattgtctcttgtcaaataaagtaat
taaattttgtgggtttaaaaaagtgaagaaagaaacaactattcttagat
aagttttttatataactttcattatttgtcaaattctgtggaattcttgg
tatttactgaaatcataatcattttataaatgtaaaatgtgagattatct
tgtgagacagaatctcactgtgtagcccaagatgaccttgaacccttggt
aagtttactgtctaggcctgttgatgccgggtacatgtgttactctctac
ttccacacttttggtcccctatattctaccacattggcttcttatatttc
tcaaagtatacaatgaccttgctccacacattttcacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_111822485_111823094
seq2: B6Ng01-042F16.b_46_655 (reverse)

seq1  GCTCCTCCTCCTCCTCTTCCTTCTACCATTCATCCTCCTAATCTTGCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTCCTCCTCCTCTTCCTTCTACCATTCATCCTCCTAATCTTGCTTT  50

seq1  CCACTCATAGCCACAGTAACAAATACCTAAATGTAAGCTATACTATGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCATAGCCACAGTAACAAATACCTAAATGTAAGCTATACTATGAGT  100

seq1  GTTACTTTAGTAAATAGCCTAAATAGATTGGGGCTTAAAGAGTGATTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTTTAGTAAATAGCCTAAATAGATTGGGGCTTAAAGAGTGATTACT  150

seq1  TGTTATTTCTTAGTCACTATATATTTCTAGTGGACATGAATTTTGATACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTTCTTAGTCACTATATATTTCTAGTGGACATGAATTTTGATACT  200

seq1  GATCATTATTATAGGCAGTATTCTACTTTCAGGAGACTAATTCTACTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTATTATAGGCAGTATTCTACTTTCAGGAGACTAATTCTACTGCC  250

seq1  ATGAATTCCTGCTTAGTATGAAAATGACATCTTAAGCCCAGTACAACTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTCCTGCTTAGTATGAAAATGACATCTTAAGCCCAGTACAACTTA  300

seq1  CACCCTCTTGATGTGGCAAGCTCTTTCTTTGATTGAATATGCTTTAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCTTGATGTGGCAAGCTCTTTCTTTGATTGAATATGCTTTAAAAA  350

seq1  TGCAATCAATATCCTACACACTGCCCAATACAACAACATAAGAAACATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATCAATATCCTACACACTGCCCAATACAACAACATAAGAAACATGA  400

seq1  AAATAAATGAAGACATAAACTACTGGTTTCACAATGATGTCTTCCAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATGAAGACATAAACTACTGGTTTCACAATGATGTCTTCCAACAA  450

seq1  GAGTGAATTAAATGAAACCAACACAATTCTAAAGAATAATTAATGAATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAATTAAATGAAACCAACACAATTCTAAAGAATAATTAATGAATAC  500

seq1  ATTTAAAGAACTCATACAGAAGAAAAAATCCCTTGGTTGAATTCCAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAGAACTCATACAGAAGAAAAAATCCCTTGGTTGAATTCCAAGAG  550

seq1  AATACACACAAACAGCTGAATGAAATAAGGAAGTCAGTACAGCATGTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACACAAACAGCTGAATGAAATAAGGAAGTCAGTACAGCATGTAGA  600

seq1  AGTGGAATTC  610
      ||||||||||
seq2  AGTGGAATTC  610

seq1: chr7_111752366_111753515
seq2: B6Ng01-042F16.g_67_1205

seq1  GAATTCTCTGGGAAGATATAGCAGGTCAGATACATGGTAACTGAACACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGGAAGATATAGCAGGTCAGATACATGGTAACTGAACACAG  50

seq1  GTGACCAGCCACATGACAGAATATAGGTCAGAATAAATGGGATATTTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCAGCCACATGACAGAATATAGGTCAGAATAAATGGGATATTTTAA  100

seq1  GTTATATCTAGTTAGAGAATAGCCTAGCTATATGGCCAAGGTTTTTGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATATCTAGTTAGAGAATAGCCTAGCTATATGGCCAAGGTTTTTGTAA  150

seq1  ATATATTTTGAGTCTCAATCATATTTCTGGGAGCATGGGGTTGGGAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTTGAGTCTCAATCATATTTCTGGGAGCATGGGGTTGGGAGGAA  200

seq1  GAATCAAGGACTAACTTCTACAAAAATATATTGTCTGAAAAAACATTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCAAGGACTAACTTCTACAAAAATATATTGTCTGAAAAAACATTTTT  250

seq1  TTTTAAATAAAAACCAAAACCCCAAACAAACAAAAAAGAGCACTTCCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATAAAAACCAAAACCCCAAACAAACAAAAAAGAGCACTTCCTGG  300

seq1  TCTCTAGAGGACATGGGAGGGGTCCCTGCTCCCCTTCAGTAGGCTCGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGAGGACATGGGAGGGGTCCCTGCTCCCCTTCAGTAGGCTCGAAA  350

seq1  CAGTCTGTAGCTACATTTCCACTCAATTTTATGCTTTCTTCCGGTTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTGTAGCTACATTTCCACTCAATTTTATGCTTTCTTCCGGTTTCTG  400

seq1  TAGGCACCCCTGCTTCTACCCACATGAGGTAGGCACTCTCTGTGGTGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCACCCCTGCTTCTACCCACATGAGGTAGGCACTCTCTGTGGTGGTG  450

seq1  TAAATGAAAGTGGCCTCTACAAGTTCACGTACTTGAATGCTTGCTCCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAAAGTGGCCTCTACAAGTTCACGTACTTGAATGCTTGCTCCTCA  500

seq1  GTTGCTAGAACTGTTTGGGAAACATTAGGAAAAGTTGCCTCGTTGGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTAGAACTGTTTGGGAAACATTAGGAAAAGTTGCCTCGTTGGAAAA  550

seq1  GGTGTGTCACTGGTGGTAGACTTTGAGGTTTCAAAAAGGATTGAAATTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGTCACTGGTGGTAGACTTTGAGGTTTCAAAAAGGATTGAAATTAT  600

seq1  AGAATAGTTTCGTAATTTTCACTCTATCTGAAGCTCGAGGACTACCTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGTTTCGTAATTTTCACTCTATCTGAAGCTCGAGGACTACCTGTA  650

seq1  TTATTTAACTGGTTTAAAGTACACTAATTCTGTCAGTTAACTCTGTTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAACTGGTTTAAAGTACACTAATTCTGTCAGTTAACTCTGTTATA  700

seq1  ATCTCACAAATGCCTATTGTAGAATTTAGTGGTTGAAAACCTTATTCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCACAAATGCCTATTGTAGAATTTAGTGGTTGAAAACCTTATTCTAT  750

seq1  AGTATAATATTG-TTAGAACATGACATTGTCTCTTGTCAAATAAAGTAAT  799
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGTATAATATTGTTTAGAACATGACATTGTCTCTTGTCAAATAAAGTAAT  800

seq1  TAAATTTTGTGGGTTTAAAAAAGTGAAGAAAGAAACAACTATTCTTAGAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTGTGGGTTTAAAAAAGTGAAGAAAGAAACAACTATTCTTAGAT  850

seq1  AAGTTTTTTATATAACTTTCATTATTTGTCAAATTCTGTGGAATTCTTGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTTTATATAACTTTCATTATTTGTCAAATTCTGTGGAATTCTTGG  900

seq1  TATTTAACTGAAATCATAATCAATTTTATAAATGTAAAATGTGAGATTAT  949
      ||||| ||||||||||||||| ||||||||||||||||||||||||||||
seq2  TATTT-ACTGAAATCATAATC-ATTTTATAAATGTAAAATGTGAGATTAT  948

seq1  CTTTGTGAGACAGAATCTCACTGTGTAGCCCAAGATGACCTTGAACCCTT  999
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-TTGTGAGACAGAATCTCACTGTGTAGCCCAAGATGACCTTGAACCCTT  997

seq1  GGTAAGTTTACTGTCTAGGCCTTGTGAATGCTGGGTTACATGTGTACTTC  1049
      ||||||||||||||||||||| |||  |||| ||| |||||||||   ||
seq2  GGTAAGTTTACTGTCTAGGCC-TGTTGATGCCGGG-TACATGTGTTACTC  1045

seq1  TTCTACTT-CTCACTTTTGGTTCCTCTATATCTAACCACATGTGCTTCTT  1098
       ||||||| | ||||||||| ||| ||||||   |||||||  |||||||
seq2  -TCTACTTCCACACTTTTGG-TCCCCTATATTCTACCACATTGGCTTCTT  1093

seq1  ATATTTTCTTTAAAAGTATACAATGACCTATGCTTCTACCAATTTTTCAC  1148
      |||||   | | ||||||||||||||||| |||| |   ||  |||||||
seq2  ATATT---TCTCAAAGTATACAATGACCT-TGCTCC--ACACATTTTCAC  1137

seq1  TA  1150
      ||
seq2  TA  1139