BAC Information

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BAC

Clone NameB6Ng01-043G11
Chromosome7 (Build37)
Map Location 110,669,332 - 110,793,881
singlet/doubletdoublet
Overlap geneEG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622
Upstream geneLOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555, Olfr556, Trim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611
Downstream geneOlfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043G11.bB6Ng01-043G11.g
ACCDH869478DH869479
length1,1481,069
definitionDH869478|Mus musculus domesticus DNA, BAC clone: B6Ng01-043G11, 5' end.DH869479|Mus musculus domesticus DNA, BAC clone: B6Ng01-043G11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,792,730 - 110,793,881)(110,669,332 - 110,670,406)
sequence
gaattcctgcatgacattccctctcgagaagatatttaagggtagaaaga
gactcagaacatcttgagacctccgagttttagaaacagaatgattatcc
caggatcccaggaaagttgtctgtcatcaatgaagcatctcaagaactct
ccaagcctgaactcctgtaagtgaacagacagttttctaaatcaaatgct
gcttgtcttcaggcagctcaccatatgtaaaacaataaaacaggtcctga
atgccgcaggccctctggtcccctgtgcctgcgtaggaaagagtctctag
agtagatgagcaaagattaggatgtattgacaagcagtcaaacacacaag
agaggtgttgaatctgaatgtaatgttctggttgagcttcagacttatat
tacaacgaattatcagaggatacaaatcacaaaaagacaagatacactga
gattcaccagttacagcagaaaggaatttgcagggactaattaaatgttt
acattagggataacaagccctgcctaggatcaacctaaaagcatcagggg
gttgttaactcttgataggccttaagagtagtgtgttatcaggagctcta
aattcttaggtctagtaaaacttatcctgtctggagagttcccccttatc
agggtagtatatcaacttatacttgtcatggaatgtagcctgtagtaaaa
gatttctatatcagtgagacttttagtctctatctacagacagctgagta
aatgacagatgttttattgttttatggtagagcttaattagttactgaat
aggttaagctccttgctgctatctggaatctaagaacactgggaaaaggc
tttagctatgttagaatacaatcttaaaagacatttactataagtaatac
tatatagagtgcacgtggatccatacactagactaatgtggatttggaaa
attaattttatgggttagggaatagccaaagatccaggagtaagttcctt
gaaacgctttcctcatgagaaagctttcagaatttcatttgacaagctga
ctccaccggagtcctgtgacacctgaaccatacatctatacaaaatggag
catattctatgctgttctctattcctggaaatgcaagtttctgaaact
gaattctgtaatcacagtttcccctttctgttaaagaccatgagtagtca
tgacctacattcagctacgttgttatatgtgaagctctcccctgagaatt
aaaatctccctaaacactctttttcttaatgtgaggatcaacactggcct
tccctagatgcaatgcaagaatgcccaggttctgaatatgtgattgcatc
agaagaagtgttagtagacatcaagtttgtattaattcaagtctgttaga
tgtcagtttaccaatgaatgacatagtttagcaccatgaaaattctacat
atatgtaaactataaataagaaagctagcaagttcatataattggaggtt
ttccattcaagtctttattgctctttaattaatttgatccattccaaaca
aaacactatttggcatttctagaaattttagcagtgttcagaagcaaatg
actccttttgcactgtcatcatccttctttagtccgtatactccatacaa
acatcaatgaataatattttaagcaccactaaggatattttgtgttattt
cttacaactgcatgtgaacctagacctctaccaatataagcttttaaaca
acttttaacattttaaacatgtattggaaggaagaaagggaaatggaaaa
gcatgaaattatattgtaattttttaaaataaaagcattataaaatataa
tatcattgtagttagcctattatgcaacagcacatttgaacttctatcta
aacatagtaggtctccttctatcacatgttatggtaaaaaggattcctga
aaggtgaatagactctcagactgtaagacctccaaagctgggcctctgct
caagtcccaggatgagttggccagcactccaatgactcgagaggaaacca
tacctgatgcaaactgcaagaggttttattatcagctagctgaggacgat
gtccctctgccatgcagacaggggattttgatcctgagtggtgacagtag
ggggcttttacagctaactgagattgggaggagttgggaggagtctttcc
tgctggtgtccttggtgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_110792730_110793881
seq2: B6Ng01-043G11.b_47_1194 (reverse)

seq1  AGTTTCAG-AACTTGCATTTCCAGGAATAGAGAACAGCATAGAATTATGC  49
      |||||||| ||||||||||||||||||||||||||||||||||| |||||
seq2  AGTTTCAGAAACTTGCATTTCCAGGAATAGAGAACAGCATAGAA-TATGC  49

seq1  TCCATTTTGTGTATGATGTATGGTTCAGGTGTCACGGGACTCCGGTGGAG  99
      |||||||||| || ||||||||||||||||||||| ||||||||||||||
seq2  TCCATTTTGTATA-GATGTATGGTTCAGGTGTCACAGGACTCCGGTGGAG  98

seq1  TCAGCTTGTCAAATGAAATTCTGAAAGCTTTCTCATGAGGAAAGCGTTTC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTGTCAAATGAAATTCTGAAAGCTTTCTCATGAGGAAAGCGTTTC  148

seq1  AAGGAAACTTACTCCTGGATCTTTGGCTATTCCCCTAACCCATAAAATTA  199
      |||| |||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAGG-AACTTACTCCTGGATCTTTGGCTATT-CCCTAACCCATAAAATTA  196

seq1  ATTTTCCAAATCCACATTAGTCTAGTGTATGGATCCACGTGCACTCTATA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCAAATCCACATTAGTCTAGTGTATGGATCCACGTGCACTCTATA  246

seq1  TAGTATTACCTTATAGTAAATGTCTTTTAAGATTGTATTCTAACATAGCT  299
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTA-CTTATAGTAAATGTCTTTTAAGATTGTATTCTAACATAGCT  295

seq1  AAAGCCTTTTCCCAGTGTTCTTAGATTCCAGATAGCAGCAAGGAGCTTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTTTTCCCAGTGTTCTTAGATTCCAGATAGCAGCAAGGAGCTTAA  345

seq1  CCTATTCAGTAACTAATTAAGCTCTACCATAAAACAATAAAACATCTGTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTCAGTAACTAATTAAGCTCTACCATAAAACAATAAAACATCTGTC  395

seq1  ATTTACTCAGCTGTCTGTAGATAGAGACTAAAAGTCTCACTGATATAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTCAGCTGTCTGTAGATAGAGACTAAAAGTCTCACTGATATAGAA  445

seq1  ATCTTTTACTACAGGCTACATTCCATGACAAGTATAAGTTGATATACTAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTACTACAGGCTACATTCCATGACAAGTATAAGTTGATATACTAC  495

seq1  CCTGATAAGGGGGAACTCTCCAGACAGGATAAGTTTTACTAGACCTAAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATAAGGGGGAACTCTCCAGACAGGATAAGTTTTACTAGACCTAAGA  545

seq1  ATTTAGAGCTCCTGATAACACACTACTCTTAAGGCCTATCAAGAGTTAAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAGCTCCTGATAACACACTACTCTTAAGGCCTATCAAGAGTTAAC  595

seq1  AACCCCCTGATGCTTTTAGGTTGATCCTAGGCAGGGCTTGTTATCCCTAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCCTGATGCTTTTAGGTTGATCCTAGGCAGGGCTTGTTATCCCTAA  645

seq1  TGTAAACATTTAATTAGTCCCTGCAAATTCCTTTCTGCTGTAACTGGTGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACATTTAATTAGTCCCTGCAAATTCCTTTCTGCTGTAACTGGTGA  695

seq1  ATCTCAGTGTATCTTGTCTTTTTGTGATTTGTATCCTCTGATAATTCGTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGTGTATCTTGTCTTTTTGTGATTTGTATCCTCTGATAATTCGTT  745

seq1  GTAATATAAGTCTGAAGCTCAACCAGAACATTACATTCAGATTCAACACC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATATAAGTCTGAAGCTCAACCAGAACATTACATTCAGATTCAACACC  795

seq1  TCTCTTGTGTGTTTGACTGCTTGTCAATACATCCTAATCTTTGCTCATCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGTGTGTTTGACTGCTTGTCAATACATCCTAATCTTTGCTCATCT  845

seq1  ACTCTAGAGACTCTTTCCTACGCAGGCACAGGGGACCAGAGGGCCTGCGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAGAGACTCTTTCCTACGCAGGCACAGGGGACCAGAGGGCCTGCGG  895

seq1  CATTCAGGACCTGTTTTATTGTTTTACATATGGTGAGCTGCCTGAAGACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGGACCTGTTTTATTGTTTTACATATGGTGAGCTGCCTGAAGACA  945

seq1  AGCAGCATTTGATTTAGAAAACTGTCTGTTCACTTACAGGAGTTCAGGCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCATTTGATTTAGAAAACTGTCTGTTCACTTACAGGAGTTCAGGCT  995

seq1  TGGAGAGTTCTTGAGATGCTTCATTGATGACAGACAACTTTCCTGGGATC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGTTCTTGAGATGCTTCATTGATGACAGACAACTTTCCTGGGATC  1045

seq1  CTGGGATAATCATTCTGTTTCTAAAACTCGGAGGTCTCAAGATGTTCTGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATAATCATTCTGTTTCTAAAACTCGGAGGTCTCAAGATGTTCTGA  1095

seq1  GTCTCTTTCTACCCTTAAATATCTTCTCGAGAGGGAATGTCATGCAGGAA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTTCTACCCTTAAATATCTTCTCGAGAGGGAATGTCATGCAGGAA  1145

seq1  TTC  1152
      |||
seq2  TTC  1148

seq1: chr7_110669332_110670406
seq2: B6Ng01-043G11.g_65_1133

seq1  GAATTCTGTAATCACAGTTTCCCCTTTCTGTTAAAGACCATGAGTAGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAATCACAGTTTCCCCTTTCTGTTAAAGACCATGAGTAGTCA  50

seq1  TGACCTACATTCAGCTACGTTGTTATATGTGAAGCTCTCCCCTGAGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTACATTCAGCTACGTTGTTATATGTGAAGCTCTCCCCTGAGAATT  100

seq1  AAAATCTCCCTAAACACTCTTTTTCTTAATGTGAGGATCAACACTGGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTCCCTAAACACTCTTTTTCTTAATGTGAGGATCAACACTGGCCT  150

seq1  TCCCTAGATGCAATGCAAGAATGCCCAGGTTCTGAATATGTGATTGCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAGATGCAATGCAAGAATGCCCAGGTTCTGAATATGTGATTGCATC  200

seq1  AGAAGAAGTGTTAGTAGACATCAAGTTTGTATTAATTCAAGTCTGTTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAGTGTTAGTAGACATCAAGTTTGTATTAATTCAAGTCTGTTAGA  250

seq1  TGTCAGTTTACCAATGAATGACATAGTTTAGCACCATGAAAATTCTACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGTTTACCAATGAATGACATAGTTTAGCACCATGAAAATTCTACAT  300

seq1  ATATGTAAACTATAAATAAGAAAGCTAGCAAGTTCATATAATTGGAGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAAACTATAAATAAGAAAGCTAGCAAGTTCATATAATTGGAGGTT  350

seq1  TTCCATTCAAGTCTTTATTGCTCTTTAATTAATTTGATCCATTCCAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTCAAGTCTTTATTGCTCTTTAATTAATTTGATCCATTCCAAACA  400

seq1  AAACACTATTTGGCATTTCTAGAAATTTTAGCAGTGTTCAGAAGCAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTATTTGGCATTTCTAGAAATTTTAGCAGTGTTCAGAAGCAAATG  450

seq1  ACTCCTTTTGCACTGTCATCATCCTTCTTTAGTCCGTATACTCCATACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTTTGCACTGTCATCATCCTTCTTTAGTCCGTATACTCCATACAA  500

seq1  ACATCAATGAATAATATTTTAAGCACCACTAAGGATATTTTGTGTTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAATGAATAATATTTTAAGCACCACTAAGGATATTTTGTGTTATTT  550

seq1  CTTACAACTGCATGTGAACCTAGACCTCTACCAATATAAGCTTTTAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAACTGCATGTGAACCTAGACCTCTACCAATATAAGCTTTTAAACA  600

seq1  ACTTTTAACATTTTAAACATGTATTGGAAGGAAGAAAGGGAAATGGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTAACATTTTAAACATGTATTGGAAGGAAGAAAGGGAAATGGAAAA  650

seq1  GCATGAAATTATATTGTAATTTTTTAAAATAAAAGCATTATAAAATATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAAATTATATTGTAATTTTTTAAAATAAAAGCATTATAAAATATAA  700

seq1  TATCATTGTAGTTAGCCTATTATGCAACAGCACATTTGAACTTCTATCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTGTAGTTAGCCTATTATGCAACAGCACATTTGAACTTCTATCTA  750

seq1  AACATAGTAGGTCTCCTTCTATCACATGTTATGGTAAAAAGGATTCCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGTAGGTCTCCTTCTATCACATGTTATGGTAAAAAGGATTCCTGA  800

seq1  AAGGTGAATAGACTCTCAGACTGTAAGACCTCCAAAGCTGGGCCTCTGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGAATAGACTCTCAGACTGTAAGACCTCCAAAGCTGGGCCTCTGCT  850

seq1  CAAGTCCCAGGATGAGTTGGCCAGCACTCCAATGACTCGAGAGGAAACCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCCCAGGATGAGTTGGCCAGCACTCCAATGACTCGAGAGGAAACCA  900

seq1  TACCTGATGCAAACTGCAAGAGGTTTTATTATCAGCTAGCTGAGGACGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGATGCAAACTGCAAGAGGTTTTATTATCAGCTAGCTGAGGACGAT  950

seq1  GTCCCTCTGCCATGCAGGACAGGGGATTTTGATCCTGAGTGGTGACAGTA  1000
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTCCCTCTGCCATGCA-GACAGGGGATTTTGATCCTGAGTGGTGACAGTA  999

seq1  GGGGGCTTTTAACAGCTAACTGAGGAATTGGGAGGAGTTGGGAGGAGTTC  1050
      |||||||||| |||||||||||||  ||||||||||||||||||||| ||
seq2  GGGGGCTTTT-ACAGCTAACTGAG--ATTGGGAGGAGTTGGGAGGAG-TC  1045

seq1  TTCTCTGCTGGGTGTCCTTGGTGAA  1075
      ||  ||||| |||||||||||||||
seq2  TTTCCTGCT-GGTGTCCTTGGTGAA  1069