BAC Information

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BAC

Clone NameB6Ng01-045P07
Chromosome7 (Build37)
Map Location 58,011,901 - 58,152,909
singlet/doubletdoublet
Overlap geneNell1
Upstream geneHtatip2, Prmt3, Slc6a5, 4933405O20Rik
Downstream geneEG668766, EG668767, EG668768, EG638046, EG668770, EG668774, LOC668776, LOC434186, LOC546971, LOC668779, Tmem16e, Slc17a6, EG620599, LOC654473, LOC100040608, Gas2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045P07.bB6Ng01-045P07.g
ACCDH871258DH871259
length1,2021,098
definitionDH871258|Mus musculus domesticus DNA, BAC clone: B6Ng01-045P07, 5' end.DH871259|Mus musculus domesticus DNA, BAC clone: B6Ng01-045P07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,151,641 - 58,152,909)(58,011,901 - 58,013,022)
sequence
gaattcaagattactgagtaattataaaaacaaatggaacattttatggt
gataactgattaggaagcagatcccttgattgacgtgggaaacaaaggca
aaggagtggccttattgaagcttggaggaaagaatagtttgagctaaagc
actaaactctgagaagggacaattataggtctgaggctggtttctctaaa
taaaagggacttcagtgaacctggattcaggcttgtaagtatctgctatg
tgacagaatttgcctgtgagtcctgtatcctacaggatataaaatctaca
tctattcatcccagaaagtgagcacaggacaagccaaggtaccaactgta
ccaaagactaccttggtagttcagtgagtttttatcattggttactggca
agagcagggtcaggaagtcactttcaggagcatgcctaggaagaatggat
gaaaacttacttagtaaaaccagagaagcgtcaaaagcagtcatgtcacc
agaaatcctccccagcactggtagtgactcacgggaaggctgtgggctct
cagcacagtttgcaggcagctcaacagtccaatatatcttctcactggtg
ttcaactggccagagtctccttccccagcagttgacttatacctttttgt
actgctggggagggttcctcaagaatcttttgagttcctgtcctcccaga
catgtaagtaactgattacctcctgaggcttgtcttactctcactggaag
cactgttaactagaaacaaactgtccttcaactgggtctgaggcttggtc
tgaatctgcttgcactagtgagggcatactgagactatttagctaagaat
tggtaagtgcagcccagattccaactgcttctatagagttgcaggtgtaa
gagtgagaggcagtaatgggatgaaggtcatgagacagcttgaaaagggg
caatgatgggataacaggtattagcattctattcttttcagtctgtgata
tctagcaaatcccattgcactgtcataaattacagacgtattgactgcta
ttgagcatgcatgacagcagtaagctctacttgcctaccagtatgtgact
actgtcttttgcctatcattgaagactagattgagggtgaacctatatca
tgatccagctgcgtttatgcgttagtttcttcatggggctatgaaaccag
gc
gaattcaccctcctccttcttattccctttcaatttttcttagctttttc
aacagatgccaaacagaatttccatttgcgttcttggcagctctgcaatc
actaatgcaagcagccagttctgtaccgacggcattacattggaaagtca
aagaaataggaattcgctttaccattttattggtcatttaattattataa
aataaaatattcatctcaaaactgaataatctatttaatgtaagagcaca
gctctaaaggagcggcaccatctgggcccttcctgttctcattatagttt
cattgttatcattctggggatgtgtctgggggatttccagggaatttact
acaaagccttaaagaagagaaaaacagaacgaaatagattgttaactcat
gaagaattttggctgggatctggtgttatacgttctctagatgcatgcat
tatttccctgacagtgatatttatgctgtagattaaatgtgatttatgcc
attgaggcgtaacttctcatactcaacatgtctcacgagaatgttaattc
tctagatgataataataaatgatgggtcttaaaagtctaagactttacaa
caactttgaatttgcagttaaaagctagcaagcactgttgcttcgcaaag
atactggaggcatagatttcctcaatgcactactgtgcatttaaagtctg
gaggatgactttagagtaagggctctatgggaagtaccccccaacacgca
cacacacacacacacacacacacacacacacacacacacacacacacata
cacacacacaccctgtgcatgcacgtatagttgcaaagatggtacatctg
ctgcactaccccagaagcacctggtgtgggtcagctctcatttgttgtgg
gtaaatcctttgagtttctttcttgccatttgtgttagaatgatgtcccg
attttataaattgctcactgaaatgcattcatactatatcctgtttaggg
aagtgatgagaaagacggaggaaagcgtgcagtaccacactgagtatttc
attgatctctgattatccctgtccatagtgagactgatcagttatttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_58151641_58152909
seq2: B6Ng01-045P07.b_47_1248 (reverse)

seq1  GCCTGGTTTCCATAGCACCAGGGAGAGAAAACCAAACAGCATAAACAAGC  50
      ||||||||| |||||| ||| | ||   |||| ||   ||||||||    
seq2  GCCTGGTTT-CATAGCCCCATGAAG---AAACTAA--CGCATAAAC----  40

seq1  AAGCACTTGAGAATCATATGAATTATAAATGTTCATCACTTTCTAATTCT  100
        |||  |  | |||      || ||| | ||||| |     || | |||
seq2  --GCAGCT--GGATC------ATGATATAGGTTCACC-----CTCAATCT  75

seq1  TATGACTCTTCAAATGGATAAAGCATAAAAGGACAGTAGTCACATAACCC  150
          | |||||||   ||| | ||   ||| |||||||||||||||   |
seq2  ----AGTCTTCAA--TGAT-AGGC---AAAAGACAGTAGTCACATA---C  112

seq1  TTGTGTAGGGCCAGAGTAGAGCCTGTACTGCCTTGTCATGCATTGCCCTC  200
      |   |||||  || ||||||||   ||||||  ||||||||||    |||
seq2  T--GGTAGG--CA-AGTAGAGC--TTACTGC--TGTCATGCAT---GCTC  150

seq1  AATAGCAGTCAATACGTTTCTGTAATTTATGACAGTGCAAATGGGATTTT  250
      ||||||||||||||||  |||||||||||||||||||| ||||||| |||
seq2  AATAGCAGTCAATACG--TCTGTAATTTATGACAGTGC-AATGGGA-TTT  196

seq1  GCCTTAAGGATATCACAAGACTTGAAAAGAATAGAATTGCTAATACCTGT  300
      ||  ||  |||||||| |||| |||||||||||||| |||||||||||| 
seq2  GC--TA--GATATCAC-AGAC-TGAAAAGAATAGAA-TGCTAATACCTG-  238

seq1  TTATCCCATCATTGCCCCTTTTCAAGGCTTGTTCTCATGACCTTCATCCC  350
      ||||||||||||||||||||||||| |||   ||||||||||||||||||
seq2  TTATCCCATCATTGCCCCTTTTCAA-GCT--GTCTCATGACCTTCATCCC  285

seq1  ATTACTGCCTCTTCACTCTTACACCTGCAACTCTTATAGAAGCAGTTGGA  400
      ||||||||||| ||||||||||||||||||||| ||||||||||||||||
seq2  ATTACTGCCTC-TCACTCTTACACCTGCAACTC-TATAGAAGCAGTTGGA  333

seq1  ATCTGGGCTGCACTTACCAATTCTTAGCTAAATAGTCTCAGTATGCCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGGCTGCACTTACCAATTCTTAGCTAAATAGTCTCAGTATGCCCTC  383

seq1  ACTAGTGCAAGCAGATTCAGACCAAGCCTCAGACCCAGTTGAAGGACAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTGCAAGCAGATTCAGACCAAGCCTCAGACCCAGTTGAAGGACAGT  433

seq1  TTGTTTCTAGTTAACAGTGCTTCCAGTGAGAGTAAGACAAGCCTCAGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCTAGTTAACAGTGCTTCCAGTGAGAGTAAGACAAGCCTCAGGAG  483

seq1  GTAATCAGTTACTTACATGTCTGGGAGGACAGGAACTCAAAAGATTCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCAGTTACTTACATGTCTGGGAGGACAGGAACTCAAAAGATTCTTG  533

seq1  AGGAACCCTCCCCAGCAGTACAAAAAGGTATAAGTCAACTGCTGGGGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCCTCCCCAGCAGTACAAAAAGGTATAAGTCAACTGCTGGGGAAG  583

seq1  GAGACTCTGGCCAGTTGAACACCAGTGAGAAGATATATTGGACTGTTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTCTGGCCAGTTGAACACCAGTGAGAAGATATATTGGACTGTTGAG  633

seq1  CTGCCTGCAAACTGTGCTGAGAGCCCACAGCCTTCCCGTGAGTCACTACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGCAAACTGTGCTGAGAGCCCACAGCCTTCCCGTGAGTCACTACC  683

seq1  AGTGCTGGGGAGGATTTCTGGTGACATGACTGCTTTTGACGCTTCTCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGGGGAGGATTTCTGGTGACATGACTGCTTTTGACGCTTCTCTGG  733

seq1  TTTTACTAAGTAAGTTTTCATCCATTCTTCCTAGGCATGCTCCTGAAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTAAGTAAGTTTTCATCCATTCTTCCTAGGCATGCTCCTGAAAGT  783

seq1  GACTTCCTGACCCTGCTCTTGCCAGTAACCAATGATAAAAACTCACTGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCTGACCCTGCTCTTGCCAGTAACCAATGATAAAAACTCACTGAA  833

seq1  CTACCAAGGTAGTCTTTGGTACAGTTGGTACCTTGGCTTGTCCTGTGCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAAGGTAGTCTTTGGTACAGTTGGTACCTTGGCTTGTCCTGTGCTC  883

seq1  ACTTTCTGGGATGAATAGATGTAGATTTTATATCCTGTAGGATACAGGAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTGGGATGAATAGATGTAGATTTTATATCCTGTAGGATACAGGAC  933

seq1  TCACAGGCAAATTCTGTCACATAGCAGATACTTACAAGCCTGAATCCAGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGCAAATTCTGTCACATAGCAGATACTTACAAGCCTGAATCCAGG  983

seq1  TTCACTGAAGTCCCTTTTATTTAGAGAAACCAGCCTCAGACCTATAATTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGAAGTCCCTTTTATTTAGAGAAACCAGCCTCAGACCTATAATTG  1033

seq1  TCCCTTCTCAGAGTTTAGTGCTTTAGCTCAAACTATTCTTTCCTCCAAGC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCTCAGAGTTTAGTGCTTTAGCTCAAACTATTCTTTCCTCCAAGC  1083

seq1  TTCAATAAGGCCACTCCTTTGCCTTTGTTTCCCACGTCAATCAAGGGATC  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAAGGCCACTCCTTTGCCTTTGTTTCCCACGTCAATCAAGGGATC  1133

seq1  TGCTTCCTAATCAGTTATCACCATAAAATGTTCCATTTGTTTTTATAATT  1250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCTAATCAGTTATCACCATAAAATGTTCCATTTGTTTTTATAATT  1183

seq1  ACTCAGTAATCTTGAATTC  1269
      |||||||||||||||||||
seq2  ACTCAGTAATCTTGAATTC  1202

seq1: chr7_58011901_58013022
seq2: B6Ng01-045P07.g_67_1164

seq1  GAATTCACCCTCCTCCTTCTTATTCCCTTTCAATTTTTCTTAGCTTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCTCCTCCTTCTTATTCCCTTTCAATTTTTCTTAGCTTTTTC  50

seq1  AACAGATGCCAAACAGAATTTCCATTTGCGTTCTTGGCAGCTCTGCAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATGCCAAACAGAATTTCCATTTGCGTTCTTGGCAGCTCTGCAATC  100

seq1  ACTAATGCAAGCAGCCAGTTCTGTACCGACGGCATTACATTGGAAAGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATGCAAGCAGCCAGTTCTGTACCGACGGCATTACATTGGAAAGTCA  150

seq1  AAGAAATAGGAATTCGCTTTACCATTTTATTGGTCATTTAATTATTATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATAGGAATTCGCTTTACCATTTTATTGGTCATTTAATTATTATAA  200

seq1  AATAAAATATTCATCTCAAAACTGAATAATCTATTTAATGTAAGAGCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATATTCATCTCAAAACTGAATAATCTATTTAATGTAAGAGCACA  250

seq1  GCTCTAAAGGAGCGGCACCATCTGGGCCCTTCCTGTTCTCATTATAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAAAGGAGCGGCACCATCTGGGCCCTTCCTGTTCTCATTATAGTTT  300

seq1  CATTGTTATCATTCTGGGGATGTGTCTGGGGGATTTCCAGGGAATTTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTATCATTCTGGGGATGTGTCTGGGGGATTTCCAGGGAATTTACT  350

seq1  ACAAAGCCTTAAAGAAGAGAAAAACAGAACGAAATAGATTGTTAACTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCCTTAAAGAAGAGAAAAACAGAACGAAATAGATTGTTAACTCAT  400

seq1  GAAGAATTTTGGCTGGGATCTGGTGTTATACGTTCTCTAGATGCATGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATTTTGGCTGGGATCTGGTGTTATACGTTCTCTAGATGCATGCAT  450

seq1  TATTTCCCTGACAGTGATATTTATGCTGTAGATTAAATGTGATTTATGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCCTGACAGTGATATTTATGCTGTAGATTAAATGTGATTTATGCC  500

seq1  ATTGAGGCGTAACTTCTCATACTCAACATGTCTCACGAGAATGTTAATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGGCGTAACTTCTCATACTCAACATGTCTCACGAGAATGTTAATTC  550

seq1  TCTAGATGATAATAATAAATGATGGGTCTTAAAAGTCTAAGACTTTACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGATGATAATAATAAATGATGGGTCTTAAAAGTCTAAGACTTTACAA  600

seq1  CAACTTTGAATTTGCAGTTAAAAGCTAGCAAGCACTGTTGCTTCGCAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTTGAATTTGCAGTTAAAAGCTAGCAAGCACTGTTGCTTCGCAAAG  650

seq1  ATACTGGAGGCATAGATTTCCTCAATGCACTACTGTGCATTTAAAGTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGGAGGCATAGATTTCCTCAATGCACTACTGTGCATTTAAAGTCTG  700

seq1  GAGGATGACTTTAGAGTAAGGGCTCTATGGGAAGTACCCCCCAACACGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGACTTTAGAGTAAGGGCTCTATGGGAAGTACCCCCCAACACGCA  750

seq1  CACACACACACACACACACACACACACACACACACACACACACACACATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACACACACACATA  800

seq1  CACACACACACCCTGTGCATGCACGTATAGTTGCAAAGATGTCACATCTG  850
      |||||||||||||||||||||||||||||||||||||||||  |||||||
seq2  CACACACACACCCTGTGCATGCACGTATAGTTGCAAAGATGGTACATCTG  850

seq1  CTGCACTACCCAAGAGGCACCTGGTGTGGGTCAGCTCTCAATTTGTTGTG  900
      ||||||||||| ||| ||||||||||||||||||||||| ||||||||||
seq2  CTGCACTACCCCAGAAGCACCTGGTGTGGGTCAGCTCTC-ATTTGTTGTG  899

seq1  GGTAAAATCCTTTGGAGTTTCTTTCTTGCCATTTGTGTTAGAATGATGTT  950
      ||| ||||||||| ||||||||||||||||||||||||||||||||||| 
seq2  GGT-AAATCCTTT-GAGTTTCTTTCTTGCCATTTGTGTTAGAATGATGT-  946

seq1  CCCCGATTTTTAATAGAATTGCTCACTGAAATGCATTCAATAACTATATC  1000
       |||||||||  ||| |||||||||||||||||||||||   ||||||| 
seq2  -CCCGATTTT--ATA-AATTGCTCACTGAAATGCATTCA--TACTATAT-  989

seq1  CCTGTCTAGGGGAAGTGATGAGAAAGACAGAGGAGAGTCTGTGCCAGGTA  1050
      ||||| || ||||||||||||||||||| ||||| ||   ||||   |||
seq2  CCTGTTTA-GGGAAGTGATGAGAAAGACGGAGGAAAG--CGTGC--AGTA  1034

seq1  CCACACTGAGTATTTCATTTGAATCTTCTGATTTAATCCCTGTTCCACAT  1100
      |||||||||||||||||||   ||| |||||||  ||||||||    |||
seq2  CCACACTGAGTATTTCATT--GATC-TCTGATT--ATCCCTGT---CCAT  1076

seq1  AGTGAGACTGATCAGTTATTTG  1122
      ||||||||||||||||||||||
seq2  AGTGAGACTGATCAGTTATTTG  1098