BAC Information

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BAC

Clone NameB6Ng01-048A19
Chromosome7 (Build37)
Map Location 136,766,074 - 136,911,490
singlet/doubletdoublet
Overlap geneBrwd2
Upstream geneInpp5f, LOC100043651, 1110007A13Rik, Sec23ip, LOC210714, LOC100043144, Ppapdc1a
Downstream geneLOC100043150, Fgfr2, LOC546005, Ate1, LOC100043163, Nsmce4a, Tacc2, LOC619876
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048A19.bB6Ng01-048A19.g
ACCDH872727DH872728
length1,119813
definitionDH872727|Mus musculus domesticus DNA, BAC clone: B6Ng01-048A19, 5' end.DH872728|Mus musculus domesticus DNA, BAC clone: B6Ng01-048A19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(136,910,357 - 136,911,490)(136,766,074 - 136,766,886)
sequence
gaattctctaaaaagggcatccaggtggaacagagttggatcccacttaa
aggtgaacagaaaaaactgagtccacaaagccaccccaataataaattat
tttttaaagaccctaaagaacattgtcacgtgaatcaaagctcattacaa
actcctgttttctctctggatggaatcctggctgggtcatggagctgagg
gcccctacttgtgaatttctcctattcttggatgacggatctgggaaact
ggaagtaccactctctgtggcagtagaactcctcctggctctatgggact
taagcttttccttcatggttgcctctggcctttgccctcaagattcactt
tccttgatctctggggaagccaggccagggctctgctttctttctaccca
gtcacattcctatgtgtggacctagggtcatctgccttcaaaactgctgg
aaaacccccaatgtggccactcctggctgcagttgccatagtgacagaca
cttgcaaaaatttttttctctacttttatcccaaatcctcagaagatgct
aggggaatgtctgcttatggtctggggtttggcccagtttattatcatcc
ttcttttttgagggtgtcttatggaggaccagcaagattccacatggata
ttatcaagacaccagttctgtacgtctttctccttcactgctgtcctccc
tccttcctttcctccttccttcttctttctctcttcatcttttctcctca
ttcttctcttcttcttcttccccctcttcctcctcttcttgtctatgccc
tgttttcagtacacccccaaataaccctcgattttcaaaagccaacccaa
gcatgtgcatgtgccacaaaaatctttaaaatgagaaacaaaagaaccct
gtggagaaaagagcatttgattgtgggataaaatcctggaggattcccaa
acctaaaccacctcaatcatggaggcaggggatggttgtgctacttgaaa
ctctgtcttttctgtaggcattgtattccaatattcaccccagaatgtca
ggggcctaggaatctggtttgaaaactttagcccagaagaaagctattag
gccaaggggcatgatctta
gaattcttttgtttcaaatgaatccaagtctttaagaaatgactattagt
aagcaggccgcctccagtggaactggtttatgattagggatgggattgac
atctgtgtacgctgtgagaattggttttggcttggtattctttctgaagc
tgacatttttccagtggctgtaatatagtatgtagaaaaaagggttttgt
ttgtttcaatttgattttgagctgaagctttcactctggaagttggtccc
cagactgtgaaagtggtatataaagtggtaaaaggagagagagttttaaa
ctgtgtgtatgtgtgatccgaagtggctgccgtcatcctggaaatggaaa
gagtgagacagtgagtgtctgctgtttgtacagcctgcctggcatgtggg
cagcactgcagctgcagtggggagcacggagcaccacagagggaacagag
agagccacaggggatgcgcagcagccctccagaagcacctcgccatcccc
acttccctccgccctgcacgagggcgtctgcatgtccacatgttgaatta
acacaacagcactaatttgtagattaatttaacatcgtgttttcattttt
aaatgtgaaaagtaaactaagatctaaaatgtgaaagtattcaagacaaa
gtaaacttaaaggcaaactcttcttaaacatcccattcaaatttcagaaa
aatggaaataagatctgagagcattgcacagaatttcatgtgcttaatgt
aagttgttgttgttgttgttaagttcattgcagtattgatttttaatttt
ggtggggttgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_136910357_136911490
seq2: B6Ng01-048A19.b_44_1162 (reverse)

seq1  TAAGATCATGCCACCTTTGCCTCATTGAGCCTTTCTTTCTTGGCTAAATG  50
      |||||||||||| |||| |||| || |   ||||| |||| ||||||| |
seq2  TAAGATCATGCC-CCTTGGCCTAATAG---CTTTC-TTCTGGGCTAAA-G  44

seq1  TCTTCAAAACCAGA-TCCTAGGCCCCCTGACATTTCTGGCGTGGATATTG  99
      | ||| |||||||| ||||||| ||||||||| |||||| ||| ||||||
seq2  TTTTC-AAACCAGATTCCTAGG-CCCCTGACA-TTCTGGGGTGAATATTG  91

seq1  GAATAC-ATGCCTACAGAAAGGACAGAGTCTTCAAGTAGCACAAACCATC  148
      |||||| ||||||||||||| |||||||| |||||||||||| |||||| 
seq2  GAATACAATGCCTACAGAAAAGACAGAGT-TTCAAGTAGCAC-AACCAT-  138

seq1  CCCCTGCCTCCATGATTGGGGTGGTTTTAGGTTTGGGAATCCTCCAGGAT  198
      |||||||||||||||||| ||||| |||||||||||||||||||||||||
seq2  CCCCTGCCTCCATGATTGAGGTGG-TTTAGGTTTGGGAATCCTCCAGGAT  187

seq1  TTTATCCCACAATCAAATGCTTCTTTTCCTCCACAGGGTTCTTTTTGTTT  248
      |||||||||||||||||||| |||||| |||||||||||||||||   ||
seq2  TTTATCCCACAATCAAATGC-TCTTTT-CTCCACAGGGTTCTTTT--GTT  233

seq1  TCTCATTTTAAAGATTTTTGTGGCACATGCACATGCTTGGGTTGGCTTTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTTTAAAGATTTTTGTGGCACATGCACATGCTTGGGTTGGCTTTT  283

seq1  GAAAATCGAGGGTTATTTGGGGGTGTACTGAAAACAGGGCATAGACAAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCGAGGGTTATTTGGGGGTGTACTGAAAACAGGGCATAGACAAGA  333

seq1  AGAGGAGGAAGAGGGGGAAGAAGAAGAAGAGAAGAATGAGGAGAAAAGAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGGAAGAGGGGGAAGAAGAAGAAGAGAAGAATGAGGAGAAAAGAT  383

seq1  GAAGAGAGAAAGAAGAAGGAAGGAGGAAAGGAAGGAGGGAGGACAGCAGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAGAAAGAAGAAGGAAGGAGGAAAGGAAGGAGGGAGGACAGCAGT  433

seq1  GAAGGAGAAAGACGTACAGAACTGGTGTCTTGATAATATCCATGTGGAAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGAAAGACGTACAGAACTGGTGTCTTGATAATATCCATGTGGAAT  483

seq1  CTTGCTGGTCCTCCATAAGACACCCTCAAAAAAGAAGGATGATAATAAAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGGTCCTCCATAAGACACCCTCAAAAAAGAAGGATGATAATAAAC  533

seq1  TGGGCCAAACCCCAGACCATAAGCAGACATTCCCCTAGCATCTTCTGAGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCAAACCCCAGACCATAAGCAGACATTCCCCTAGCATCTTCTGAGG  583

seq1  ATTTGGGATAAAAGTAGAGAAAAAAATTTTTGCAAGTGTCTGTCACTATG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGATAAAAGTAGAGAAAAAAATTTTTGCAAGTGTCTGTCACTATG  633

seq1  GCAACTGCAGCCAGGAGTGGCCACATTGGGGGTTTTCCAGCAGTTTTGAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGCAGCCAGGAGTGGCCACATTGGGGGTTTTCCAGCAGTTTTGAA  683

seq1  GGCAGATGACCCTAGGTCCACACATAGGAATGTGACTGGGTAGAAAGAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGATGACCCTAGGTCCACACATAGGAATGTGACTGGGTAGAAAGAAA  733

seq1  GCAGAGCCCTGGCCTGGCTTCCCCAGAGATCAAGGAAAGTGAATCTTGAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCCCTGGCCTGGCTTCCCCAGAGATCAAGGAAAGTGAATCTTGAG  783

seq1  GGCAAAGGCCAGAGGCAACCATGAAGGAAAAGCTTAAGTCCCATAGAGCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGGCCAGAGGCAACCATGAAGGAAAAGCTTAAGTCCCATAGAGCC  833

seq1  AGGAGGAGTTCTACTGCCACAGAGAGTGGTACTTCCAGTTTCCCAGATCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAGTTCTACTGCCACAGAGAGTGGTACTTCCAGTTTCCCAGATCC  883

seq1  GTCATCCAAGAATAGGAGAAATTCACAAGTAGGGGCCCTCAGCTCCATGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCCAAGAATAGGAGAAATTCACAAGTAGGGGCCCTCAGCTCCATGA  933

seq1  CCCAGCCAGGATTCCATCCAGAGAGAAAACAGGAGTTTGTAATGAGCTTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCAGGATTCCATCCAGAGAGAAAACAGGAGTTTGTAATGAGCTTT  983

seq1  GATTCACGTGACAATGTTCTTTAGGGTCTTTAAAAAATAATTTATTATTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCACGTGACAATGTTCTTTAGGGTCTTTAAAAAATAATTTATTATTG  1033

seq1  GGGTGGCTTTGTGGACTCAGTTTTTTCTGTTCACCTTTAAGTGGGATCCA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGCTTTGTGGACTCAGTTTTTTCTGTTCACCTTTAAGTGGGATCCA  1083

seq1  ACTCTGTTCCACCTGGATGCCCTTTTTAGAGAATTC  1134
      ||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTTCCACCTGGATGCCCTTTTTAGAGAATTC  1119

seq1: chr7_136766074_136766886
seq2: B6Ng01-048A19.g_64_876

seq1  GAATTCTTTTGTTTCAAATGAATCCAAGTCTTTAAGAAATGACTATTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGTTTCAAATGAATCCAAGTCTTTAAGAAATGACTATTAGT  50

seq1  AAGCAGGCCGCCTCCAGTGGAACTGGTTTATGATTAGGGATGGGATTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGCCGCCTCCAGTGGAACTGGTTTATGATTAGGGATGGGATTGAC  100

seq1  ATCTGTGTACGCTGTGAGAATTGGTTTTGGCTTGGTATTCTTTCTGAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGTACGCTGTGAGAATTGGTTTTGGCTTGGTATTCTTTCTGAAGC  150

seq1  TGACATTTTTCCAGTGGCTGTAATATAGTATGTAGAAAAAAGGGTTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTTTTCCAGTGGCTGTAATATAGTATGTAGAAAAAAGGGTTTTGT  200

seq1  TTGTTTCAATTTGATTTTGAGCTGAAGCTTTCACTCTGGAAGTTGGTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCAATTTGATTTTGAGCTGAAGCTTTCACTCTGGAAGTTGGTCCC  250

seq1  CAGACTGTGAAAGTGGTATATAAAGTGGTAAAAGGAGAGAGAGTTTTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGTGAAAGTGGTATATAAAGTGGTAAAAGGAGAGAGAGTTTTAAA  300

seq1  CTGTGTGTATGTGTGATCCGAAGTGGCTGCCGTCATCCTGGAAATGGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGTATGTGTGATCCGAAGTGGCTGCCGTCATCCTGGAAATGGAAA  350

seq1  GAGTGAGACAGTGAGTGTCTGCTGTTTGTACAGCCTGCCTGGCATGTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGACAGTGAGTGTCTGCTGTTTGTACAGCCTGCCTGGCATGTGGG  400

seq1  CAGCACTGCAGCTGCAGTGGGGAGCACGGAGCACCACAGAGGGAACAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTGCAGCTGCAGTGGGGAGCACGGAGCACCACAGAGGGAACAGAG  450

seq1  AGAGCCACAGGGGATGCGCAGCAGCCCTCCAGAAGCACCTCGCCATCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCACAGGGGATGCGCAGCAGCCCTCCAGAAGCACCTCGCCATCCCC  500

seq1  ACTTCCCTCCGCCCTGCACGAGGGCGTCTGCATGTCCACATGTTGAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCTCCGCCCTGCACGAGGGCGTCTGCATGTCCACATGTTGAATTA  550

seq1  ACACAACAGCACTAATTTGTAGATTAATTTAACATCGTGTTTTCATTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAACAGCACTAATTTGTAGATTAATTTAACATCGTGTTTTCATTTTT  600

seq1  AAATGTGAAAAGTAAACTAAGATCTAAAATGTGAAAGTATTCAAGACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGAAAAGTAAACTAAGATCTAAAATGTGAAAGTATTCAAGACAAA  650

seq1  GTAAACTTAAAGGCAAACTCTTCTTAAACATCCCATTCAAATTTCAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACTTAAAGGCAAACTCTTCTTAAACATCCCATTCAAATTTCAGAAA  700

seq1  AATGGAAATAAGATCTGAGAGCATTGCACAGAATTTCATGTGCTTAATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAATAAGATCTGAGAGCATTGCACAGAATTTCATGTGCTTAATGT  750

seq1  AAGTTGTTGTTGTTGTTGTTAAGTTCATTGCAGTATTGATTTTTAATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGTTGTTGTTGTTGTTAAGTTCATTGCAGTATTGATTTTTAATTTT  800

seq1  GGTGGGGTTGTTT  813
      |||||||||||||
seq2  GGTGGGGTTGTTT  813