BAC Information

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BAC

Clone NameB6Ng01-050D22
Chromosome7 (Build37)
Map Location 121,680,442 - 121,866,122
singlet/doubletdoublet
Overlap genePde3b, Cyp2r1, Calca, LOC100043295, Calcb
Upstream geneMlstd2, EG434228, Spon1, Rras2, LOC668451, Copb1, Psma1, 4933406I18Rik
Downstream geneInsc, EG627967, LOC668472, Sox6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050D22.bB6Ng01-050D22.g
ACCDH874250DH874251
length1,069957
definitionDH874250|Mus musculus domesticus DNA, BAC clone: B6Ng01-050D22, 5' end.DH874251|Mus musculus domesticus DNA, BAC clone: B6Ng01-050D22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,865,033 - 121,866,122)(121,680,442 - 121,681,401)
sequence
gaattcaaagctagctctatgtacttagaaggaagccagcctgggctact
tgagactgtctcagaagcagaaaagataataaagatcttggtagtgactt
gcttatagccctgtggtctgagctggggaatgccaaccaagagtagagcc
ctgtcgaagctgggcccatgtgtgaggtgtggcactgggtaagattggca
ggtccttccctgtccaaatccaggcagcatttttctctcttctcagcaac
aaggcactgcttctatgcagtctctcctgcctttctgatttcattttcaa
actcagttcgagaaggaacttactacctcaggaagagaactagtattaaa
tatataggaccccaaggtcctacaacagtcggtgggcttcatgatgtgga
tcttagctccccagtccttcctctcccaatcctgagtacaaaatcacctt
cttcctggagctgctagtgactcaggcctgcaggtccctgcggcggcggc
ggccgaaggcttcagagcccacatcggtgggcacaaagttgtccttcagc
acacctcctgatctgctcagcaggtctgccagccgatgggtcacacaggt
ggcagtgttgcaggatctcttctgagcagtgacactgatattcaggatgg
aagagaagaagagaagtcttgtcagtgaggtctggggagttcctaccccc
tgggaactgcagtcctccaacctgccacttaaccgtaagtgtttctccta
agtgcatttatcgaagccattcagggaaatgacctgagagtctttgctag
aaactctttctcaaaccatcaccaaatagaaacaaacaaacaaacaaaca
aaacaacccaaaaaaaaaaaaataaccctttacttgctgaagtaagaaca
gcatttgtagcatcagctcagaagtgcttatctgatcctagcatgcttga
tgtcatgctgtgtcacagagacaagccctgtgcctagctcccctgaaact
aaggctctttcttagccctgggcactcataagcttcagagttgacaagca
atgatcactgcaactctga
gaattctgttcttactgattttgttccatggttgaatttaaaagtatata
ataatgaaggagctttattctttattcaaatctgttcttattcttattct
ttctcaggataagtaattttaaacaattattataaatattgcatagattt
gccagagaaaaaaacattgtcctgatattgatgttatcttttatgaaatg
agcaccattttattttaattagagtcaagaaaaaggagctggccatcttt
tgccttaatggaaaatcaatgaaaccaatcccatcgaagatattgcctaa
atatttagttatctttagatatatgtcttaggtgtctagtaaaattgaca
ttttttattgttaatatctttctgcttcaagagtacatggcagagatgac
acatcactatttagtaatattacagccccacagacagaattttgaagtaa
agtacataatgggaatgcatattaatttttaataaagtgctataaaataa
atatgctatgaatagttcaataaataattccataaatgcttataaataaa
taatttactaagaaaacaggacacatttatgtttatataatctcattaga
gtgtggctatgtgccccagttgtgaaaaattattgaagttatacaaagca
accaaaataataccaaaatggtaaactggtttcttcttatcctttataca
ttattttgaagccattgaactttgtgcacagttaactgtcagtttccaca
gtatttcctatatagtgtgatgctggaatttcttacctacctaagatatt
tgggttgtctacaaggccacagttaaagattgattggagtactggtattt
ttgatcctgtaggtaccatattaatgaatcactacactttatttataaac
atgtgagtgctgagttccttctgtcacttttgctaccacaactacatcat
ttgtaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_121865033_121866122
seq2: B6Ng01-050D22.b_43_1111 (reverse)

seq1  TCAGAGTTGCAGTGATCATTGCTCTGGTCAACCTCTGAAGCTTATGAGTG  50
      |||||||||||||||||||||  || ||||| ||||||||||||||||||
seq2  TCAGAGTTGCAGTGATCATTG--CTTGTCAA-CTCTGAAGCTTATGAGTG  47

seq1  GCCAGGGCCTAGGAAAGAGCCTTAGTTTCAGGGGAGCTAGGCACAGGGCT  100
       |||||| ||| ||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGG-CTAAGAAAGAGCCTTAGTTTCAGGGGAGCTAGGCACAGGGCT  96

seq1  TGTCTCTGTGACACAGCAATGACATCAAGCATGCTAAGGATCAGATAAGC  150
      ||||||||||||||||| ||||||||||||||||| ||||||||||||||
seq2  TGTCTCTGTGACACAGC-ATGACATCAAGCATGCT-AGGATCAGATAAGC  144

seq1  ACTTCTGAGCTGATGCTACAAATGCTGTTCTTAACTTCAGCAAGGTAAAA  200
      |||||||||||||||||||||||||||||||| |||||||||||   |||
seq2  ACTTCTGAGCTGATGCTACAAATGCTGTTCTT-ACTTCAGCAAG--TAAA  191

seq1  GGGTTTTTTTTTTTTTTTTTTTTTTTGGTTTGTTTTTGTTTTGTTTTGTT  250
      |||       || ||||||||||||||| ||| ||||||||   ||||||
seq2  GGG-------TTATTTTTTTTTTTTTGGGTTG-TTTTGTTT--GTTTGTT  231

seq1  TTGTTTTGTTTCTATTTGGTGATGGTTTGAGAAAGAGTTTCTAGCAAAGA  300
      |   ||||||||||||||||||||||||||||||||||||||||||||||
seq2  T--GTTTGTTTCTATTTGGTGATGGTTTGAGAAAGAGTTTCTAGCAAAGA  279

seq1  CTCTCAGGTCATTTCCCTGAATGGCTTCGATAAATGCACTTAGGAGAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGGTCATTTCCCTGAATGGCTTCGATAAATGCACTTAGGAGAAAC  329

seq1  ACTTACGGTTAAGTGGCAGGTTGGAGGACTGCAGTTCCCAGGGGGTAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACGGTTAAGTGGCAGGTTGGAGGACTGCAGTTCCCAGGGGGTAGGA  379

seq1  ACTCCCCAGACCTCACTGACAAGACTTCTCTTCTTCTCTTCCATCCTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCAGACCTCACTGACAAGACTTCTCTTCTTCTCTTCCATCCTGAA  429

seq1  TATCAGTGTCACTGCTCAGAAGAGATCCTGCAACACTGCCACCTGTGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTGTCACTGCTCAGAAGAGATCCTGCAACACTGCCACCTGTGTGA  479

seq1  CCCATCGGCTGGCAGACCTGCTGAGCAGATCAGGAGGTGTGCTGAAGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCGGCTGGCAGACCTGCTGAGCAGATCAGGAGGTGTGCTGAAGGAC  529

seq1  AACTTTGTGCCCACCGATGTGGGCTCTGAAGCCTTCGGCCGCCGCCGCCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGTGCCCACCGATGTGGGCTCTGAAGCCTTCGGCCGCCGCCGCCG  579

seq1  CAGGGACCTGCAGGCCTGAGTCACTAGCAGCTCCAGGAAGAAGGTGATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACCTGCAGGCCTGAGTCACTAGCAGCTCCAGGAAGAAGGTGATTT  629

seq1  TGTACTCAGGATTGGGAGAGGAAGGACTGGGGAGCTAAGATCCACATCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTCAGGATTGGGAGAGGAAGGACTGGGGAGCTAAGATCCACATCAT  679

seq1  GAAGCCCACCGACTGTTGTAGGACCTTGGGGTCCTATATATTTAATACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCCACCGACTGTTGTAGGACCTTGGGGTCCTATATATTTAATACTA  729

seq1  GTTCTCTTCCTGAGGTAGTAAGTTCCTTCTCGAACTGAGTTTGAAAATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTTCCTGAGGTAGTAAGTTCCTTCTCGAACTGAGTTTGAAAATGA  779

seq1  AATCAGAAAGGCAGGAGAGACTGCATAGAAGCAGTGCCTTGTTGCTGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGAAAGGCAGGAGAGACTGCATAGAAGCAGTGCCTTGTTGCTGAGA  829

seq1  AGAGAGAAAAATGCTGCCTGGATTTGGACAGGGAAGGACCTGCCAATCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAAAAATGCTGCCTGGATTTGGACAGGGAAGGACCTGCCAATCTT  879

seq1  ACCCAGTGCCACACCTCACACATGGGCCCAGCTTCGACAGGGCTCTACTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGTGCCACACCTCACACATGGGCCCAGCTTCGACAGGGCTCTACTC  929

seq1  TTGGTTGGCATTCCCCAGCTCAGACCACAGGGCTATAAGCAAGTCACTAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTGGCATTCCCCAGCTCAGACCACAGGGCTATAAGCAAGTCACTAC  979

seq1  CAAGATCTTTATTATCTTTTCTGCTTCTGAGACAGTCTCAAGTAGCCCAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCTTTATTATCTTTTCTGCTTCTGAGACAGTCTCAAGTAGCCCAG  1029

seq1  GCTGGCTTCCTTCTAAGTACATAGAGCTAGCTTTGAATTC  1090
      ||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTTCCTTCTAAGTACATAGAGCTAGCTTTGAATTC  1069

seq1: chr7_121680442_121681401
seq2: B6Ng01-050D22.g_68_1023

seq1  GAATTCTGTTCTTACTGATTTTGTTCCATGGTTGAATTTAAAAGTATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTCTTACTGATTTTGTTCCATGGTTGAATTTAAAAGTATATA  50

seq1  ATAATGAAGGAGCTTTATTCTTTATTCAAATCTGTTCTTATTCTTATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGAAGGAGCTTTATTCTTTATTCAAATCTGTTCTTATTCTTATTCT  100

seq1  TTCTCAGGATAAGTAATTTTAAACAATTATTATAAATATTGCATAGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGGATAAGTAATTTTAAACAATTATTATAAATATTGCATAGATTT  150

seq1  GCCAGAGAAAAAAACATTGTCCTGATATTGATGTTATCTTTTATGAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGAAAAAAACATTGTCCTGATATTGATGTTATCTTTTATGAAATG  200

seq1  AGCACCATTTTATTTTAATTAGAGTCAAGAAAAAGGAGCTGGCCATCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCATTTTATTTTAATTAGAGTCAAGAAAAAGGAGCTGGCCATCTTT  250

seq1  TGCCTTAATGGAAAATCAATGAAACCAATCCCATCGAAGATATTGCCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTAATGGAAAATCAATGAAACCAATCCCATCGAAGATATTGCCTAA  300

seq1  ATATTTAGTTATCTTTAGATATATGTCTTAGGTGTCTAGTAAAATTGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAGTTATCTTTAGATATATGTCTTAGGTGTCTAGTAAAATTGACA  350

seq1  TTTTTTATTGTTAATATCTTTCTGCTTCAAGAGTACATGGCAGAGATGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTATTGTTAATATCTTTCTGCTTCAAGAGTACATGGCAGAGATGAC  400

seq1  ACATCACTATTTAGTAATATTACAGCCCCACAGACAGAATTTTGAAGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCACTATTTAGTAATATTACAGCCCCACAGACAGAATTTTGAAGTAA  450

seq1  AGTACATAATGGGAATGCATATTAATTTTTAATAAAGTGCTATAAAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACATAATGGGAATGCATATTAATTTTTAATAAAGTGCTATAAAATAA  500

seq1  ATATGCTATGAATAGTTCAATAAATAATTCCATAAATGCTTATAAATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTATGAATAGTTCAATAAATAATTCCATAAATGCTTATAAATAAA  550

seq1  TAATTTACTAAGAAAACAGGACACATTTATGTTTATATAATCTCATTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTACTAAGAAAACAGGACACATTTATGTTTATATAATCTCATTAGA  600

seq1  GTGTGGCTATGTGCCCCAGTTGTGAAAAATTATTGAAGTTATACAAAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGCTATGTGCCCCAGTTGTGAAAAATTATTGAAGTTATACAAAGCA  650

seq1  ACCAAAATAATACCAAAATGGTAAACTGGTTTCTTCTTATCCTTTATACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAATAATACCAAAATGGTAAACTGGTTTCTTCTTATCCTTTATACA  700

seq1  TTATTTTGAAGCCATTGAACTTTGTGCACAGTTAACTGTCAGTTTCCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGAAGCCATTGAACTTTGTGCACAGTTAACTGTCAGTTTCCACA  750

seq1  GTATTTCCTATATAGTGTGATGCTGGAATTTCTTACCTACCTAAGATATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCCTATATAGTGTGATGCTGGAATTTCTTACCTACCTAAGATATT  800

seq1  TGGGTTGTCTACAAGGCCACAGTTAAAGATTGATTGGAGTACTGGTATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTGTCTACAAGGCCACAGTTAAAGATTGATTGGAGTACTGGTATTT  850

seq1  TTGATCCTGTAGGTACCATATTTAATGAATCACTACACTTTATTTATTAA  900
      |||||||||||||||||||| ||||||||||||||||||||||||| |||
seq2  TTGATCCTGTAGGTACCATA-TTAATGAATCACTACACTTTATTTA-TAA  898

seq1  ACATGTTGAGTGCTGAGTTCCTTCCTGTCACTTTTGCTACCACAACTACA  950
      ||||| ||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACATG-TGAGTGCTGAGTTCCTT-CTGTCACTTTTGCTACCACAACTACA  946

seq1  TCATTTGTAA  960
      ||||||||||
seq2  TCATTTGTAA  956