BAC Information

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BAC

Clone NameB6Ng01-051H16
Chromosome7 (Build37)
Map Location 90,338,103 - 90,463,010
singlet/doubletdoublet
Overlap genenone
Upstream geneSh3gl3, Adamtsl3, 1700129I04Rik, Eftud1, LOC100038986, LOC619808, Rkhd3, LOC619909, A530021J07Rik
Downstream geneEG666160, Tmc3, Stard5, Il16, Phgdh-ps1, LOC666170, 1700026D08Rik, Mesdc1, Mesdc2, 9930013L23Rik, 2210412D01Rik, Arnt2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051H16.bB6Ng01-051H16.g
ACCDH875109DH875110
length1,182943
definitionDH875109|Mus musculus domesticus DNA, BAC clone: B6Ng01-051H16, 5' end.DH875110|Mus musculus domesticus DNA, BAC clone: B6Ng01-051H16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,338,103 - 90,339,296)(90,462,064 - 90,463,010)
sequence
gaattctctgaacagtgtctatctgcaatgtgccattgatgacttctgtt
tgtgacaactgaggtataagcgcctgtcacaaaacagtgtttcctactgt
tttctgttcctgctgtgtctcttaattttaggttctgggaatcgacagcc
ttcattggattgatggatacaccataggctgaactgagagatcttggata
ataaaaggttggggaatttaaggttttgtgtcccaggagagatcccagaa
agttgctaccacatggaaggtgaggtcagagaaagcagcagaacaactta
gcagggcacacgtgatgcctggccagtatggtactttcagacagaacggg
ctgactcaatgcaggattcggagtggcttctaggaggacgtgggcttgaa
aactgcttcctgtgtcccttctataaacacagagtgaaacatacttgtct
tttgtagtaatagaaaaatataaaaatgaaactaatgattaagaatgtgg
tatcttaaaagcaaaataaatagcgtgttgagagcaaaagtaccttgctt
gtatttgggtcaccctgggtagcctgtctatattaaactcataatccaca
tactccattgaactctaaacttatttatgaaaacccatcagaaggagata
attaaggagataaaggtttctgcaacttgttggatgttggttaaagaata
aattttgactaagaaaaaaataagacaaaatattagttttaaatgatttt
agttttacttatgtgcatatatgtgagtcagagacggagtatgtgcacat
gcaggcagttgcctgtggatgccagaggaaggtgtcagatcatgagtagc
tttcaattacaggttgttgtgaaccactggatatgtggacagggaagaaa
ttcagattttctgcaagtgcagcctttctcctaaccactgagataattct
gtagctgagaaaccaaatcttatgaaagtagtttagtacacgttttatac
cactttataagaggcatagtagtcattaaaataggacttttagcaattga
agcacttaagatatgatagttactggaaagtgaggtacacagttaatttt
atattaattagtatgcaagcctcttttcccgaaaacggaattagtggact
agaaaaaaagtttatcatgtattcaagggatg
gaattcttgatcctccaagagtttggagtctggataacaaggtacttttg
tgtacccattcagataacagcatcccatccaggtctcactccactcctca
ggcctagactttgttttgagcccctcctagttcctccagtcattgaggct
gaggatttcagctctgggatagtttatttctgtccactcatcagcctggt
gagatgttggctggaatccccagtaggtgacaaatgagtagtgagtgcct
gatagaaatgcccagtactatctgccttccaaatacccagcccacccacc
caccccaccctgggcttcacctgcatgagaaatccctttgtagggacagt
accctttgaagttgttcttaattttttctcagagtttatagccattaact
ttgtcaatggggtcatattctgcaggttttttgggtggattgtatttctt
gagtggaaaacatactttacatttaaaaatcatccagtttcaaaagctag
gttaggaggggaaaggcaaggagaaggcggtggagatgggagggtcattt
tgaacaaatgtttcagtttctttgcaattcgttgatactgattttttgaa
tctcaagttctaaggagttatgtatttttgccatagatatttaactagat
ttctccctcttttggaaatgcaaagtgtctcctttgggttccgtatttgc
tcacctctgtagctttgggtggtcacgtccctgtgacagggagactgagg
tgatcggtacactctccataattgttctttccctagcacttgacagtgaa
tactcaagggtaaggccatgcttcggggtttttgaacctatggattcaaa
ttattttattttaacacaagggttatccaccaattactattaagatatgt
ccttattaatgtgacataaaacttcatgctgcattggttttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_90338103_90339296
seq2: B6Ng01-051H16.b_44_1225

seq1  GAATTCTCTGAACAGTGTCTATCTGCAATGTGCCATTGATGACTTCTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGAACAGTGTCTATCTGCAATGTGCCATTGATGACTTCTGTT  50

seq1  TGTGACAACTGAGGTATAAGCGCCTGTCACAAAACAGTGTTTCCTACTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACAACTGAGGTATAAGCGCCTGTCACAAAACAGTGTTTCCTACTGT  100

seq1  TTTCTGTTCCTGCTGTGTCTCTTAATTTTAGGTTCTGGGAATCGACAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTCCTGCTGTGTCTCTTAATTTTAGGTTCTGGGAATCGACAGCC  150

seq1  TTCATTGGATTGATGGATACACCATAGGCTGAACTGAGAGATCTTGGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGGATTGATGGATACACCATAGGCTGAACTGAGAGATCTTGGATA  200

seq1  ATAAAAGGTTGGGGAATTTAAGGTTTTGTGTCCCAGGAGAGATCCCAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGGTTGGGGAATTTAAGGTTTTGTGTCCCAGGAGAGATCCCAGAA  250

seq1  AGTTGCTACCACATGGAAGGTGAGGTCAGAGAAAGCAGCAGAACAACTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCTACCACATGGAAGGTGAGGTCAGAGAAAGCAGCAGAACAACTTA  300

seq1  GCAGGGCACACGTGATGCCTGGCCAGTATGGTACTTTCAGACAGAACGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGCACACGTGATGCCTGGCCAGTATGGTACTTTCAGACAGAACGGG  350

seq1  CTGACTCAATGCAGGATTCGGAGTGGCTTCTAGGAGGACGTGGGCTTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCAATGCAGGATTCGGAGTGGCTTCTAGGAGGACGTGGGCTTGAA  400

seq1  AACTGCTTCCTGTGTCCCTTCTATAAACACAGAGTGAAACATACTTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTTCCTGTGTCCCTTCTATAAACACAGAGTGAAACATACTTGTCT  450

seq1  TTTGTAGTAATAGAAAAATATAAAAATGAAACTAATGATTAAGAATGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGTAATAGAAAAATATAAAAATGAAACTAATGATTAAGAATGTGG  500

seq1  TATCTTAAAAGCAAAATAAATAGCGTGTTGAGAGCAAAAGTACCTTGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTAAAAGCAAAATAAATAGCGTGTTGAGAGCAAAAGTACCTTGCTT  550

seq1  GTATTTGGGTCACCCTGGGTAGCCTGTCTATATTAAACTCATAATCCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGGGTCACCCTGGGTAGCCTGTCTATATTAAACTCATAATCCACA  600

seq1  TACTCCATTGAACTCTAAACTTATTTATGAAAACCCATCAGAAGGAGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCATTGAACTCTAAACTTATTTATGAAAACCCATCAGAAGGAGATA  650

seq1  ATTAAGGAGATAAAGGTTTCTGCAACTTGTTGGATGTTGGTTAAAGAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGGAGATAAAGGTTTCTGCAACTTGTTGGATGTTGGTTAAAGAATA  700

seq1  AATTTTGACTAAGAAAAAAATAAGACAAAATATTAGTTTTAAATGATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGACTAAGAAAAAAATAAGACAAAATATTAGTTTTAAATGATTTT  750

seq1  AGTTTTACTTATGTGCATATATGTGAGTCAGAGACGGAGTATGTGCACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTACTTATGTGCATATATGTGAGTCAGAGACGGAGTATGTGCACAT  800

seq1  GCAGGCAGTTGCCTGTGGATGCCAGAGGAAGGTGTCAGATCATGAGTAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCAGTTGCCTGTGGATGCCAGAGGAAGGTGTCAGATCATGAGTAGC  850

seq1  -TTCAATTACAGGTTGTTGTGAACCACTGGATATGTGGACAGGGAAGAAA  899
       |||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTTCAATTACAGGTTGTTGTGAACCACTGGATATGTGGACAGGGAAG-AA  899

seq1  ATTCAGATTTTCTGCAAGTGCAGCCTTTCTCCTAACCACTGAGATAATTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGATTTTCTGCAAGTGCAGCCTTTCTCCTAACCACTGAGATAATTC  949

seq1  TGTAGCTGAGAAACCAAATCTTATGAAAGTAGTTAAGTACACGTTTTATA  999
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  TGTAGCTGAGAAACCAAATCTTATGAAAGTAGTTTAGTACACGTTTTAT-  998

seq1  ACCACTTTAATAGAGGCATAGGTAGTCATTAAAATAGAACTTTTAAGGCA  1049
      |||||||||  ||||||||| |||||||||||||||| |||||||  || 
seq2  ACCACTTTATAAGAGGCATA-GTAGTCATTAAAATAGGACTTTTA--GC-  1044

seq1  AAATTGAAAGCACTTAAGATATGATAGTAACTGAAAAGTGAGGTACACAG  1099
       ||||| ||||||||||||||||||||| |||| ||||||||||||||||
seq2  -AATTG-AAGCACTTAAGATATGATAGTTACTGGAAAGTGAGGTACACAG  1092

seq1  TTATATTTATACATTAATAAGTATGCAAGCTCTTTTTACACAGAAACAGA  1149
      |||  |||||  |||||| ||||||||||| || ||| | |  |||| ||
seq2  TTAATTTTAT--ATTAATTAGTATGCAAGC-CTCTTTTCCCGAAAACGGA  1139

seq1  ATTAGATGGGACTAGAAAAAAAAGTTATCAATGTA-TCAAGGGATG  1194
      |||||   ||||||||||||||  ||||| ||||| ||||||||||
seq2  ATTAG--TGGACTAGAAAAAAAGTTTATC-ATGTATTCAAGGGATG  1182

seq1: chr7_90462064_90463010
seq2: B6Ng01-051H16.g_67_1008 (reverse)

seq1  CAAAAACAATGACAGCATGTAAGTTTTATGTCACATTCATAAGGACATAT  50
      ||||| ||||| ||||||| ||||||||||||||||| ||||||||||||
seq2  CAAAACCAATG-CAGCATG-AAGTTTTATGTCACATTAATAAGGACATAT  48

seq1  ACTTATATAGTAATTTGTTGGATAAACCTTTGTGTTATAATAAAAATAAT  100
       |||| ||||||| ||| ||||| |||| |||||||| ||| ||||||||
seq2  -CTTA-ATAGTAA-TTGGTGGAT-AACCCTTGTGTTAAAAT-AAAATAAT  93

seq1  TTGAATCCATAGGTTCAAAGACGCACGAAGCATGGCCTTACCCTTGAGTA  150
      ||||||||||||||||||| || | |||||||||||||||||||||||| 
seq2  TTGAATCCATAGGTTCAAAAAC-CCCGAAGCATGGCCTTACCCTTGAGT-  141

seq1  ATTCACTGTCAAGTGCTAGGGAAAAGAACAATTATGGAGAGTGTACCGAT  200
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATTCACTGTCAAGTGCTAGGG-AAAGAACAATTATGGAGAGTGTACCGAT  190

seq1  CACCTCAGTCTCCCTGTCACAGGGACGTGACCACCC-AAGCTACAGAGGT  249
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CACCTCAGTCTCCCTGTCACAGGGACGTGACCACCCAAAGCTACAGAGGT  240

seq1  GAGC-AATACGGAACCCAAAGGAGACACTTTGCATTTCC-AAAGAGGGAG  297
      |||| |||||||||||||||||||||||||||||||||| ||||||||||
seq2  GAGCAAATACGGAACCCAAAGGAGACACTTTGCATTTCCAAAAGAGGGAG  290

seq1  -AATCTAGTTAAATATCTATGGCAAAAATACATAACTCCTTAGAACTTGA  346
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTAGTTAAATATCTATGGCAAAAATACATAACTCCTTAGAACTTGA  340

seq1  GATTC-AAAAATCAGTATCAACGAATTGCAAAGAAACTGAAACATTTGTT  395
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAAAAAATCAGTATCAACGAATTGCAAAGAAACTGAAACATTTGTT  390

seq1  CAAAATGACCCTCCCATCTCCACCGCCTTCTCCTTGCCTTTCCCCTCCTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGACCCTCCCATCTCCACCGCCTTCTCCTTGCCTTTCCCCTCCTA  440

seq1  ACCTAGCTTTTGAAACTGGATGATTTTTAAATGTAAAGTATGTTTTCCAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGCTTTTGAAACTGGATGATTTTTAAATGTAAAGTATGTTTTCCAC  490

seq1  TCAAGAAATACAATCCACCCAAAAAACCTGCAGAATATGACCCCATTGAC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAAATACAATCCACCCAAAAAACCTGCAGAATATGACCCCATTGAC  540

seq1  AAAGTTAATGGCTATAAACTCTGAGAAAAAATTAAGAACAACTTCAAAGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTAATGGCTATAAACTCTGAGAAAAAATTAAGAACAACTTCAAAGG  590

seq1  GTACTGTCCCTACAAAGGGATTTCTCATGCAGGTGAAGCCCAGGGTGGGG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGTCCCTACAAAGGGATTTCTCATGCAGGTGAAGCCCAGGGTGGGG  640

seq1  TGGGTGGGTGGGCTGGGTATTTGGAAGGCAGATAGTACTGGGCATTTCTA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGGTGGGCTGGGTATTTGGAAGGCAGATAGTACTGGGCATTTCTA  690

seq1  TCAGGCACTCACTACTCATTTGTCACCTACTGGGGATTCCAGCCAACATC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCACTCACTACTCATTTGTCACCTACTGGGGATTCCAGCCAACATC  740

seq1  TCACCAGGCTGATGAGTGGACAGAAATAAACTATCCCAGAGCTGAAATCC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAGGCTGATGAGTGGACAGAAATAAACTATCCCAGAGCTGAAATCC  790

seq1  TCAGCCTCAATGACTGGAGGAACTAGGAGGGGCTCAAAACAAAGTCTAGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTCAATGACTGGAGGAACTAGGAGGGGCTCAAAACAAAGTCTAGG  840

seq1  CCTGAGGAGTGGAGTGAGACCTGGATGGGATGCTGTTATCTGAATGGGTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGAGTGGAGTGAGACCTGGATGGGATGCTGTTATCTGAATGGGTA  890

seq1  CACAAAAGTACCTTGTTATCCAGACTCCAAACTCTTGGAGGATCAAGAAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAAGTACCTTGTTATCCAGACTCCAAACTCTTGGAGGATCAAGAAT  940

seq1  TC  947
      ||
seq2  TC  942