BAC Information

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BAC

Clone NameB6Ng01-051M06
Chromosome7 (Build37)
Map Location 127,516,459 - 127,517,566
singlet/doubletsinglet
Overlap geneAbca15
Upstream geneGp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1, BC048390, Thumpd1, EG434233, Acsm3, Exod1, 2610020H08Rik, Dcun1d3, LOC100043399, LOC100043396, Lyrm1, Dnahc3, Tmem159, Zp2, Anks4b, Crym, Abca14
Downstream geneAbca16, LOC668429, LOC546994, LOC100042914, E130201H02Rik, LOC637957, Uqcrc2, 4930408O21Rik, BC030336, E030013G06Rik, EG436008, LOC100043426, Eef2k, Polr3e, Cdr2, 4933427G17Rik, EG668548, Mettl9, LOC668456, Igsf6, Otoa, LOC668556
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051M06.bB6Ng01-051M06.g
ACCDH875311DH875312
length8521,095
definitionDH875311|Mus musculus domesticus DNA, BAC clone: B6Ng01-051M06, 5' end.DH875312|Mus musculus domesticus DNA, BAC clone: B6Ng01-051M06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttactctatagcacattgagttgccatgaggttcagctttttgc
cagaaaggcataactatcctcccctaaccttcctcttccctcttctttct
ccctccctctctcattttgtttgtctttttctgatgctggccagagctaa
atgtgttctttgctgttgttgctgtttatactttgggcttccttactctc
tctctaagatgctccttccagccatgcagctgctgtccaccatacaggac
tcaaagggagggaccttagatgaaatgcctggcagtagggagaggggact
tctagagcccacctgcagcaggaagacagggcagcgaggttgccatccca
gagtcacatctctgactcataattacagggatggaaatggagaggagcct
gaggaaaggaaggtccagcgacaggcccaaagtggttctagctcaagggg
aggtctcaaggcctgacactattactgagactatggaatgctcacaaaaa
gggaccaatcatgactgctctccaaaagacccaacaagcagctgaaagag
tcagatgcagatatttgcacccaatcaatggacagaagcagctgactcgt
gctgttgaattaaggaaggctgaaagaagctaaggagaagggcaatcctg
taagaagaccagcagtctcaattaatctggacctccaagatctctcaaac
actggacctccaaacaaacagcatacaccagctgatatgagggccacaat
acacatacagcagaggacttccaggttctgtgttaattcagagatgatgc
acccaaccctcaagagactggaggagaggtcaggtgggttggggggggtg
gg
gaattcaaatgaatatgttgggagtcattttgtttcgataaatctcctcc
caaataagccccagcaaatgaaaacacaacacagttaatatgattacatg
ttgtgtgcctagattggacagatctaccactacactaccatcttccacat
ctatgagaccccttagaactcatggtttctccaggccatgtgcttctgct
cagcttttctttttctcccattttctccttttctcccccaccttctactc
caccttcccttttatgtacccaaacatcagctctcctttattttaaaaat
taaggtgggaagcaggtttacaggaaatcacctgagtgctgactcattcc
tcctttgaaacccctcagaggagaacagatttaacatcaaatataattag
tcccagggctatccacaacagaggtgggttggtgcttgggaactaaatca
gatgtcactaaacaatgaataacctgcaggatgtggtggcacacatcttt
aatcccagcactcaggaggcagaggcaggtgtatttctgagttcgaggcc
agcctggtctacaaagtgagttccaggacatccagggctgcacagagaga
ccctgtctcaaaaaagaaaaacaaaacaaaacaaaaacaatgaataaccc
aaagtgcctttggagtcaggggttgccactcacattcttcaagcaaggga
tagtgggataaagttgaaatgacaagttttgtttatttttttaatatagg
gtcagtaacctggaagactcaaaaacagatatcgaagctacccagtcgcc
ctcggtaggaagcaaagggaacaagaatggggatgttgaaagcagcggga
gagtaggctttcccacccagagtgaagatcagaacattgtgtttaacact
ggggtagaaattttgctaagaaacaggtgtctctcagtcagtacgcatag
ttttgtcttgtattatacataaccaaaagatatagaagtattagccacta
tagattcagtgtggtgtgaaaagttgggacccagctgatcaatgataaat
gtacaaagatggttctaaaaacctatcaactgttaccgctgatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_127516459_127517566
seq2: B6Ng01-051M06.g_65_1159

seq1  GAATTCAAATGAATATGTTGGGAGTCATTTTGTTTCGATAAATCTCCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATGAATATGTTGGGAGTCATTTTGTTTCGATAAATCTCCTCC  50

seq1  CAAATAAGCCCCAGCAAATGAAAACACAACACAGTTAATATGATTACATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAGCCCCAGCAAATGAAAACACAACACAGTTAATATGATTACATG  100

seq1  TTGTGTGCCTAGATTGGACAGATCTACCACTACACTACCATCTTCCACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGCCTAGATTGGACAGATCTACCACTACACTACCATCTTCCACAT  150

seq1  CTATGAGACCCCTTAGAACTCATGGTTTCTCCAGGCCATGTGCTTCTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAGACCCCTTAGAACTCATGGTTTCTCCAGGCCATGTGCTTCTGCT  200

seq1  CAGCTTTTCTTTTTCTCCCATTTTCTCCTTTTCTCCCCCACCTTCTACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTTCTTTTTCTCCCATTTTCTCCTTTTCTCCCCCACCTTCTACTC  250

seq1  CACCTTCCCTTTTATGTACCCAAACATCAGCTCTCCTTTATTTTAAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCCCTTTTATGTACCCAAACATCAGCTCTCCTTTATTTTAAAAAT  300

seq1  TAAGGTGGGAAGCAGGTTTACAGGAAATCACCTGAGTGCTGACTCATTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTGGGAAGCAGGTTTACAGGAAATCACCTGAGTGCTGACTCATTCC  350

seq1  TCCTTTGAAACCCCTCAGAGGAGAACAGATTTAACATCAAATATAATTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGAAACCCCTCAGAGGAGAACAGATTTAACATCAAATATAATTAG  400

seq1  TCCCAGGGCTATCCACAACAGAGGTGGGTTGGTGCTTGGGAACTAAATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGGCTATCCACAACAGAGGTGGGTTGGTGCTTGGGAACTAAATCA  450

seq1  GATGTCACTAAACAATGAATAACCTGCAGGATGTGGTGGCACACATCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCACTAAACAATGAATAACCTGCAGGATGTGGTGGCACACATCTTT  500

seq1  AATCCCAGCACTCAGGAGGCAGAGGCAGGTGTATTTCTGAGTTCGAGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAGCACTCAGGAGGCAGAGGCAGGTGTATTTCTGAGTTCGAGGCC  550

seq1  AGCCTGGTCTACAAAGTGAGTTCCAGGACATCCAGGGCTGCACAGAGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGTCTACAAAGTGAGTTCCAGGACATCCAGGGCTGCACAGAGAGA  600

seq1  CCCTGTCTCAAAAAAGAAAAACAAAACAAAACAAAAACAATGAATAACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTCAAAAAAGAAAAACAAAACAAAACAAAAACAATGAATAACCC  650

seq1  AAAGTGCCTTTGGAGTCAGGGGTTGCCACTCACATTCTTCAAGCAAGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCCTTTGGAGTCAGGGGTTGCCACTCACATTCTTCAAGCAAGGGA  700

seq1  TAGTGGGATAAAGTTGAAATGACAAGTTTTGTTTATTTTTTTAATATAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGGATAAAGTTGAAATGACAAGTTTTGTTTATTTTTTTAATATAGG  750

seq1  GTCAGTAACCTGGAAGACTCAAAAACAGATATCGAAGCTACCCAGTCGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTAACCTGGAAGACTCAAAAACAGATATCGAAGCTACCCAGTCGCC  800

seq1  CTCGGTAGGAAGCAAAGGGAACAAGAATGGGGATGTTGAAAGCAGCGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGTAGGAAGCAAAGGGAACAAGAATGGGGATGTTGAAAGCAGCGGGA  850

seq1  GAGTAGGCTTTCCCACCCAGAGTGAAGATCAGAACATTGTGTTTAACACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGGCTTTCCCACCCAGAGTGAAGATCAGAACATTGTGTTTAACACT  900

seq1  GGGGTAAGAAATTTTGCTAAGAAACAGGTGTCTCTCAGTCAGTACGCAAT  950
      ||||| ||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGGGT-AGAAATTTTGCTAAGAAACAGGTGTCTCTCAGTCAGTACGC-AT  948

seq1  AGTTTTGTCTTGTATTAATACATAAACCAAAAGAATATAGAAGTATTAGC  1000
      |||||||||||||||| |||||| ||||||||| ||||||||||||||||
seq2  AGTTTTGTCTTGTATT-ATACAT-AACCAAAAG-ATATAGAAGTATTAGC  995

seq1  CACTATAGAATCAGTGTGGTGTGGAAAAGTTGGGACCCCAGCCTGATCAA  1050
      ||||||||| |||||||||||| |||||||||||| ||||| ||||||||
seq2  CACTATAGATTCAGTGTGGTGT-GAAAAGTTGGGA-CCCAG-CTGATCAA  1042

seq1  TGATTAAATGTACAGAGATTGGTTCTAGAAAAACCTATCAACTGTTTACT  1100
      ||| |||||||||| ||| |||||||  |||||||||||||||| |||| 
seq2  TGA-TAAATGTACAAAGA-TGGTTCT--AAAAACCTATCAACTG-TTACC  1087

seq1  GCTGATGC  1108
      ||||||||
seq2  GCTGATGC  1095