BAC Information

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BAC

Clone NameB6Ng01-051N09
Chromosome7 (Build37)
Map Location 22,092,650 - 22,093,686
singlet/doubletsinglet
Overlap genenone
Upstream geneEG667129, EG667135, EG435946, LOC100042976, LOC100043550, LOC667156, LOC673977, LOC667166, LOC100042980, EG381936, LOC100043559, LOC667311, LOC100043561, LOC667302, EG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953, LOC673902, EG667240, EG435951, Gm1446, LOC381937, LOC100043588, LOC670764, EG667215, LOC100043013
Downstream geneLOC621561, EG667199, EG621510, LOC667186, EG628475, LOC100043595, LOC100043596, LOC667358, LOC100043016, LOC100043602, LOC100043604, EG667378, LOC100043607, LOC100043019, LOC100043025, EG667404, EG435940, LOC100043026, EG545929, LOC667421, LOC100043614, LOC667431, LOC100043029, EG620736, EG667444, LOC100043033, LOC100043037, EG667464, EG667469, EG667472, EG667094, LOC100043625, LOC100043626
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051N09.bB6Ng01-051N09.g
ACCDH875362DH875363
length1,039783
definitionDH875362|Mus musculus domesticus DNA, BAC clone: B6Ng01-051N09, 5' end.DH875363|Mus musculus domesticus DNA, BAC clone: B6Ng01-051N09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaatggagaaattttgagtagcttagaaatactgtaggtagag
caggggagagataagtgatatcagtgattgagtaggtcagtctctaggat
gtgccagagaccggggatggcgagagactcgagagcatctatgggtgact
ctagctgagactccaatagtcagaaatgtgaatcctgaagtgcccatttc
ctgtagccaagcaaagctcccactggaaggataaggacaacaaactactc
aaaaaacttttgccccaaattgtaccctgaatactatatgtatagtgaca
aataaagagcatagattgagggaatgaccaaccaatgactgacccaaatt
gagacccattccatgggcaagaaccaatccctaacattattgataatgct
ctgttattctggcagagaggaacctgacataactgtcttctgagaggttc
cacccagcaagccagtggaaagagatgcagaaacttatacccaaaaatta
gatgaaggttttggagtcttatgaatgagttgggagaatgattgaaggcc
atgaagaggacagggactctacagaaacccaacagagtcaacaaacctag
acctttgggagatatcatagactgaattagctgtcaaaattgagcgcagc
ctggaccctgtaggtatgtagcagatgagcggcttgctcttcatgaggtt
ccccccaaaactggaccctcacggtcttttcctgagcctattgccttttt
gtttgttgacacatcttcccacccctgttgctcctaaatggaccaacttg
cctggtctcaatgggagagaatgtgtgaaattcagcagagattgatgtgt
gactagtttggggttcagttggttaatcagggattatgaggcatgaggaa
agtggtttgactgtgcttcagaaaggtaatacccagaagagggcttcccc
ttctcagaaacgagaagaagtggaatggtggggagaatttgataaaggag
gtactgagaaggaggaggatgggactgatatttttgttg
gaattcatttccaatttgtattcctttatctccttttgttgtcgaattgc
tctggctaggacttcaactacaacgttgaataggtatggagaaagtgggt
agaattttattgagtatttttgcatcgatattcataagggaaattggtct
gaagttctctatctctattgggtctttatgtggtttaggtatcagagtaa
atgtggcttcatagaatgaattgggttgagtaccttctgtttctgttttg
tagaatatcttgagaagctctggaattaagtcttctttgaaggtctgata
aaactctgcactaaacccatctggtcctgggtttttttttttggttggga
gactattcatgactgtttctatttccttaagggattgggactgtttaggt
cattaatctgatccagatttaactttggtacctggtatctgtctagaaat
ttgtccatttcttccaggatttccagttttgttgagtatggcatttttag
tgggatctgatggtgttctggattttcttgcacccggggattcatcccat
aattggccaccaaatgcagtcactattgcatatgggaggaagatttccct
ggaacaccctgatatagctatctcaagtgaggctatgcgagtgcctggca
aatacagtagaggttactcacagtcacctataggatggaacacagggctc
ccaatggaggagctaaagaaagtacccaaggtgctgaagggttctgtaac
cctataagtggaacaacaattatgaactaacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_22092650_22093686
seq2: B6Ng01-051N09.b_42_1080

seq1  GAATTCTCAATGGAGGAATTTTGAGTGGCTGAGAAATACTGCAGGTAGAG  50
      ||||||||||||||| |||||||||| ||| |||||||||| ||||||||
seq2  GAATTCTCAATGGAGAAATTTTGAGTAGCTTAGAAATACTGTAGGTAGAG  50

seq1  CAGGGGAGAGATAAGTGATATCAGTGATTGAGGAGGTCAGTCTCTAGGAT  100
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAGGGGAGAGATAAGTGATATCAGTGATTGAGTAGGTCAGTCTCTAGGAT  100

seq1  GTGCCAGAGACCGGGGATGGGGAGAGGCTTGAGAGCATCTATGGGTGACT  150
      |||||||||||||||||||| ||||| || ||||||||||||||||||||
seq2  GTGCCAGAGACCGGGGATGGCGAGAGACTCGAGAGCATCTATGGGTGACT  150

seq1  CTAGCTGAGACTCCAATAGTCAGAAATGTGAATCCTGAAGTGCCCATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTGAGACTCCAATAGTCAGAAATGTGAATCCTGAAGTGCCCATTTC  200

seq1  CTGTAGCCAAGCAAAGCTCCCACTGGAAGGATAAGGATAACAAACTACTC  250
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTGTAGCCAAGCAAAGCTCCCACTGGAAGGATAAGGACAACAAACTACTC  250

seq1  AAAAAACCTTTGCCCCAAATTGTACCCTGACTACTATATGTATAGTGACA  300
      ||||||| |||||||||||||||||||||| |||||||||||||||||||
seq2  AAAAAACTTTTGCCCCAAATTGTACCCTGAATACTATATGTATAGTGACA  300

seq1  AATAAAGAGCATAGACTGAGGGAATGACCAACCAATGACTGACCCAAATT  350
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AATAAAGAGCATAGATTGAGGGAATGACCAACCAATGACTGACCCAAATT  350

seq1  GAGACCCATTCCATGGGCAAGAACCAATCCCTAACATTATTGATAATGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCCATTCCATGGGCAAGAACCAATCCCTAACATTATTGATAATGCT  400

seq1  CTGTTATTCTTGCAGATAGGAACCTGACATAACTGTCTTCTGAGAGGTTC  450
      |||||||||| ||||| |||||||||||||||||||||||||||||||||
seq2  CTGTTATTCTGGCAGAGAGGAACCTGACATAACTGTCTTCTGAGAGGTTC  450

seq1  CACCCAGCAAGCCAGTGGAAAGAGATGCAGAAACTTATACCCAAAAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAGCAAGCCAGTGGAAAGAGATGCAGAAACTTATACCCAAAAATTA  500

seq1  GATGAAGGTTTTGGAGTCTTATGAATGAGTTGGGAGAAGGATTGAAGGCC  550
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GATGAAGGTTTTGGAGTCTTATGAATGAGTTGGGAGAATGATTGAAGGCC  550

seq1  ATGAAGAGGACAGGGACTCTACAGAAACCCAACAGAGTCAACAAACCTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAGGACAGGGACTCTACAGAAACCCAACAGAGTCAACAAACCTAG  600

seq1  ACCTTTGGGAGATCCCATAGACTGAATCAGCTGTCAAAATTGAGCAGAGA  650
      |||||||||||||  |||||||||||| |||||||||||||||||  || 
seq2  ACCTTTGGGAGATATCATAGACTGAATTAGCTGTCAAAATTGAGCGCAGC  650

seq1  CTGGACCCTGCAGGTATGTAGCAGATGAGCAGCTTGCTCTTCATGAGGGT  700
      |||||||||| ||||||||||||||||||| ||||||||||||||||| |
seq2  CTGGACCCTGTAGGTATGTAGCAGATGAGCGGCTTGCTCTTCATGAGGTT  700

seq1  CCCCCCAAAACTGGACCCTCACGGTCTTTTTCTGAGCCTATTGCCTTTTT  750
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCCCCCAAAACTGGACCCTCACGGTCTTTTCCTGAGCCTATTGCCTTTTT  750

seq1  GTTTGTTGACACAT-TTCCCACCCCTGTTGCTCCTAAATGGACCAACTTG  799
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTTTGTTGACACATCTTCCCACCCCTGTTGCTCCTAAATGGACCAACTTG  800

seq1  CCTGGTCTCAATGGGAGAGAATGTGTGAAATTCAGCAGAGATTGATGTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCTCAATGGGAGAGAATGTGTGAAATTCAGCAGAGATTGATGTGT  850

seq1  GACTGGTTTGGGGTTCAGTTGGTTAATCAGGGATTTGTGAGGCATGAGGA  899
      |||| |||||||||||||||||||||||||||| || |||||||||||||
seq2  GACTAGTTTGGGGTTCAGTTGGTTAATCAGGGA-TTATGAGGCATGAGGA  899

seq1  AAGTGGTTTGACTGTGCTTCAGAAAGGGTGATACCCAGAAGAGGGCTTCC  949
      ||||||||||||||||||||||||| ||| ||||||||||||||||||||
seq2  AAGTGGTTTGACTGTGCTTCAGAAA-GGTAATACCCAGAAGAGGGCTTCC  948

seq1  CTTTCTCAAGAAACGAGAAGAAGGTAGAATGGT-GGGAGAATTTGATAAA  998
      | ||||| |||||||||||||| || ||||||| ||||||||||||||||
seq2  CCTTCTC-AGAAACGAGAAGAA-GTGGAATGGTGGGGAGAATTTGATAAA  996

seq1  GGAGGTACTGA-TAGGA-GAGGGT-GGACTGATA-TTTTGTTG  1037
      |||||||||||  |||| |||| | ||||||||| ||||||||
seq2  GGAGGTACTGAGAAGGAGGAGGATGGGACTGATATTTTTGTTG  1039