BAC Information

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BAC

Clone NameB6Ng01-052G13
Chromosome7 (Build37)
Map Location 68,071,486 - 68,071,993
singlet/doubletsinglet
Overlap genenone
Upstream geneSnrpn, Snurf, EG664849, LOC100041201, LOC100041211, LOC664896
Downstream geneLOC100041229, LOC625287, D0Kist2, LOC100041248, LOC100041259, EG664943, B230209E15Rik, EG620934
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052G13.bB6Ng01-052G13.g
ACCDH875773DH875774
length9781,173
definitionDH875773|Mus musculus domesticus DNA, BAC clone: B6Ng01-052G13, 5' end.DH875774|Mus musculus domesticus DNA, BAC clone: B6Ng01-052G13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccccattttttaatggggttattggatt
tttctggagtccaccttcttgagttctttatatatatactggatattatt
cccctctctgatttagtaaaggtaaagatcctttcccaatctgttggtgg
cctttttgtcttattgacagtatcttttgccttgcaggagctttgcaatt
tagtgaggtcccatttgtcaattctcgatcttatagcacaagccattgtt
gttctatttaggaatttttcccctgtacccatacattcgagggttttttc
ctactttctcgtctataagtttcagtgtctctggttttatgtggagttcc
ttaatccacttagatttgaccttagtacaaggagacaggaatggatcaat
tcgcattcttctacattataaaggccagttgtgccaacaccatttgttga
aaatgctgtcttttttccactggatgttttttgctcccttgtcaaagatc
aagtgaccataggtgtgtgagttcatttctgaatcccttttttgttttgt
tttgttttttttttttttgagacaggatttctatgtatacccctggctgt
cctggaactcactctgtagaccaggctgacctcaaactcagaaatctgcc
tgcctctgcctcccaagtgctgggattaaaggcatgtaccaccatgcccc
atttctgggtcttcaattctattccattggtctacttgtctgtcgctata
ccagtaccatgcagttttttatcacaattgctctgtagtacagctttagg
tcaggcatggtgattctaccagaggttcttttatccttgagaagagtgtt
tgcttacctaagttttttgttattccagatgaattgcagattgacctttc
taaattgttcagaatgagttggaatttgatggagattgcattggatttga
gatgctttggcagaaagcatttttcatt
gaattcagaaagaaagttgcctattcagtgacattcagaattacctctgg
cattacactatcactttgaataaaagctaggtcactgccttacacaggaa
tctactatcacctaaaaagaaggaagtttaagacctaagaggaaccggag
tagatacttagaactatagatagctgagttacacccatacacacgtattt
acaatggcctaggagaaaggtggactactaaaactggttttcaacctccc
cctgaccttgttgccctcccttttagggcccctattgggactcctattat
tgatctccttcggtccttgggcatttcaaaaattgacccgatttgttaaa
tctcaaattgattcatctctttcaagtacatttgtttcagttcattacca
ttggctggacgttggcgataacaagcaggttactagaaaagagtcagacg
tagataccgcttcatcaccctcatttcggggagagggactcaatttccat
aaaatgcttaagtaagatcattcccctccccctaaattcggccatcagtc
tcatgccacaaatcatttatagattgccgtagtctgtgcttccgacatgg
taatatacgttctggccacactggaaactaaacagtcctcccaggctaga
cacatagaaaagttggaacttgaagcagtcgcccgtgagagttgtaagac
taagtactgcacagagattagtctggaagctgttagtctctgagaggcat
gtctgattgcatgaggttgagtgccctagggtcctttcccccaagaaaaa
tggcacaggagcaggtcagggtttactctggggtatcaatctctgggcat
gagagtcaatcctgtacatggcccctaacattgcacactggggatcagac
ctctacctctacccatggagcttgcttcgttcctaatccctttgcttgac
caggtataacccaacatactgggaccattaattcaagctcatagatgact
tgtcctggtccttcatggttttagagaattaccaggtgagcaacagaaat
ttaggggatcgtaaaacggtggcaccagtattatacaaatgcgttttaaa
aaattaaccggggagagttggaacttttagaaacatctgatctgcattgg
tctccttccgaaaaaagggttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_68071486_68071993
seq2: B6Ng01-052G13.b_678_1021 (reverse)

seq1  AATGAAAAATGCTTTCT--AAATGCTTGTGGTAAAATTGGCTAATGACTG  48
      |||||||||||||||||   || || |    | ||||   | ||||    
seq2  AATGAAAAATGCTTTCTGCCAAAGCAT---CTCAAAT---CCAATG----  40

seq1  ATAACAAGTTAGTTCACTTTGGTTCTACAGAGTTTTGTACCAAGGATTTG  98
          |||                ||| |          | |||  |||  
seq2  ----CAA----------------TCTCC----------ATCAA--ATT--  56

seq1  ATGAATGCATTTTGATAAATGTTGATATATCTAAAATCAGAGTGTTCTCA  148
         ||  |||| |||  ||| | || |  ||   |||| |          
seq2  -CCAACTCATTCTGAACAATTTAGAAAGGTC---AATCTG----------  92

seq1  CACTAGAAGACTTGTATAAGAAAAAGACTGGTGAAATGTCATGATGCACT  198
      || |  |   || | |||| |||||                         
seq2  CAATTCA--TCTGGAATAACAAAAA-------------------------  115

seq1  GCAATTAGTTTACATGTCAGGTTATACTCACCTCAAACAATAAATAGAGG  248
        | ||||       || ||   | ||||  ||| ||  ||||| |||  
seq2  --ACTTAG-------GTAAGCAAACACTCTTCTC-AAGGATAAA-AGA--  152

seq1  AGGATGTTTCTCTTATATTCAGCACTGAACGTTAGATGTCTGGAGATAAA  298
              |||  || | ||| |            ||| |||      | 
seq2  -----ACCTCTGGTAGAATCACC------------ATGCCTG------AC  179

seq1  CTAAAG--TAACTACAGGGTCTTCAATAGTTTCATGGATCATGGGTTGCA  346
      ||||||    ||||||| |    |||| ||      |||           
seq2  CTAAAGCTGTACTACAGAG----CAATTGT------GAT-----------  208

seq1  GGAAAAATTGTAGAACACAACTAAAATGATGTAAATGAAAAACATGATAT  396
        ||||| || |    ||   || |  ||   | | | | | ||    ||
seq2  -AAAAAACTGCATGGTACTGGTATAGCGACAGACAAGTAGACCA----AT  253

seq1  GGAATTTTTGTGGTAAGAAGACAATACTGTGGTTAAGAGGTCAAAATGTG  446
      |||||          ||||             | ||||     |||||  
seq2  GGAAT----------AGAA------------TTGAAGACCCAGAAATG--  279

seq1  TTGGGCATTGGTGGCACACACCTTTAATCCCAACACTTGG------GAGG  490
        ||||| |||||| |||  |||||||||||| |||||||      ||||
seq2  --GGGCA-TGGTGGTACATGCCTTTAATCCCAGCACTTGGGAGGCAGAGG  326

seq1  CAGGAGGATTTCTGAGTT  508
      ||||  ||||||||||||
seq2  CAGGCAGATTTCTGAGTT  344