BAC Information

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BAC

Clone NameB6Ng01-057I19
Chromosome7 (Build37)
Map Location 112,311,997 - 112,312,974
singlet/doubletsinglet
Overlap genenone
Upstream geneE030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684
Downstream geneOlfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108, EG668117, Gvin1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057I19.bB6Ng01-057I19.g
ACCDH879389DH879390
length805975
definitionDH879389|Mus musculus domesticus DNA, BAC clone: B6Ng01-057I19, 5' end.DH879390|Mus musculus domesticus DNA, BAC clone: B6Ng01-057I19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatggctttccaaatccaaagtcctcaaatcatattcctccaaa
caaaaacaaggtcaggcctatcacaaaaatatccaaatccctggtaccaa
cttctgtcctagtaaggttttccattgctgtgaagagacaccatgaccaa
ggcaactcttataaaggacatcatttaattggggtgagcttgcagtttta
gaggttcagtccattaacatcatggcaggaagcatggcagtgtccaggca
gacaccatagaaggaactggaagttttgcatcttgatctgattgcagcct
ggaaagactgtctcccagtaagttaagaggggggtcttacagcccacccc
acagtgacacacttcctccaacaaggccacacctattccaaaaggaccac
tcccttggccaagcatattcaaaccactacacaaggtcagtaaagatttg
tgttggaattttaataggaattgtattgaatctgtagattaatttgatag
gatgattaattttaatatgttaactctactaatcaatgtgtatgggagat
tggtccatcttctgataactttttgcattttctttctttaaagacttgag
gatttttgttacataagtcctttactttgcttggttagggtttactccaa
actattttattatttgtgactactatgaaggatgttgttttcctgatttc
tttcttagccgtttgtatatagagggcttctgatttttttttttttgatt
aatcttgtatgcatccacagtggctgaagatgttttatcaccataggagt
ccata
gaattcagcctccttcccataccaacctcctagactcccgctcactcctc
agtgtctccttcatgcagattccctggaactcctgagactcaccaacttc
agaagtactggccactgctcctggctattgactgaaacataaattataaa
tggtcctctgtgtatcttttctcccctgttaggcatgaacttagttactc
ttattaggtaacataaagtggccctgtgctccatttcccaagagaaagaa
ttaaaaaatacattgaaagatttagaaaaggtcacaaagccctggagagt
ctaaatacagaaaaaaaaaaaaaaaaagatgttaaacaaggtaaaaaaaa
aaaatgtgccagaaacagagataaatctattgtgcagacttactttgtgt
gtaaaatcttaatgcattgaattcatggaaacagataataaagtaattat
tacgggactgagagtagggagagtagagagatgatggctgagggttcaaa
ggctcagtgaggatggatgggaaatccccagagctcaatggacaacacct
agaccaagaactcttcacattttcattaacaatgccttctttctcctttt
tccttccttccttccttcctactttccttccttcctttcttcattaattt
cctttttgttgtttttgagatagtgcctcatataccacagccatactctt
gcctcaatctcctgaaaattataaatattaatcacttttcaccaggtaag
cgttttacaaacaaacaaacacacacacaagaatcctgcaactgtgtgaa
atgatgggtatatgaattatatgaaagttagtactcagttcactgtgcat
aacattcaaaacatcatattcatatacctgtgtaaatatatgctccctct
ttggcctgcctcaggattaaattcagggctcatgggtgctaggacaaatg
tctacactgaacaaccttctcagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_112311997_112312974
seq2: B6Ng01-057I19.g_69_1043

seq1  GAATTCAGCCTCCTTCCCATACCAACCTCCTAGACTCCCGCTCACTCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCTCCTTCCCATACCAACCTCCTAGACTCCCGCTCACTCCTC  50

seq1  AGTGTCTCCTTCATGCAGATTCCCTGGAACTCCTGAGACTCACCAACTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTCCTTCATGCAGATTCCCTGGAACTCCTGAGACTCACCAACTTC  100

seq1  AGAAGTACTGGCCACTGCTCCTGGCTATTGACTGAAACATAAATTATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTACTGGCCACTGCTCCTGGCTATTGACTGAAACATAAATTATAAA  150

seq1  TGGTCCTCTGTGTATCTTTTCTCCCCTGTTAGGCATGAACTTAGTTACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTCTGTGTATCTTTTCTCCCCTGTTAGGCATGAACTTAGTTACTC  200

seq1  TTATTAGGTAACATAAAGTGGCCCTGTGCTCCATTTCCCAAGAGAAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGGTAACATAAAGTGGCCCTGTGCTCCATTTCCCAAGAGAAAGAA  250

seq1  TTAAAAAATACATTGAAAGATTTAGAAAAGGTCACAAAGCCCTGGAGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAATACATTGAAAGATTTAGAAAAGGTCACAAAGCCCTGGAGAGT  300

seq1  CTAAATACAGAAAAAAAAAAAAAAAAAGATGTTAAACAAGGTAAAAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATACAGAAAAAAAAAAAAAAAAAGATGTTAAACAAGGTAAAAAAAA  350

seq1  AAAATGTGCCAGAAACAGAGATAAATCTATTGTGCAGACTTACTTTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTGCCAGAAACAGAGATAAATCTATTGTGCAGACTTACTTTGTGT  400

seq1  GTAAAATCTTAATGCATTGAATTCATGGAAACAGATAATAAAGTAATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATCTTAATGCATTGAATTCATGGAAACAGATAATAAAGTAATTAT  450

seq1  TACGGGACTGAGAGTAGGGAGAGTAGAGAGATGATGGCTGAGGGTTCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGGACTGAGAGTAGGGAGAGTAGAGAGATGATGGCTGAGGGTTCAAA  500

seq1  GGCTCAGTGAGGATGGATGGGAAATCCCCAGAGCTCAATGGACAACACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAGTGAGGATGGATGGGAAATCCCCAGAGCTCAATGGACAACACCT  550

seq1  AGACCAAGAACTCTTCACATTTTCATTAACAATGCCTTCTTTCTCCTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAAGAACTCTTCACATTTTCATTAACAATGCCTTCTTTCTCCTTTT  600

seq1  TCCTTCCTTCCTTCCTTCCTACTTTCCTTCCTTCCTTTCTTCATTAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTTCCTTCCTTCCTACTTTCCTTCCTTCCTTTCTTCATTAATTT  650

seq1  CCTTTTTGTTGTTTTTGAGATAGTGCCTCATATACCACAGCCATACTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTGTTGTTTTTGAGATAGTGCCTCATATACCACAGCCATACTCTT  700

seq1  GCCTCAATCTCCTGAAAATTATAAATATTAATCAC-TTTCACCAGGTAAG  749
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GCCTCAATCTCCTGAAAATTATAAATATTAATCACTTTTCACCAGGTAAG  750

seq1  CGTTTTACAAACAAACAAACACACACACAAGAAATCCTGCAAACTGTGTG  799
      ||||||||||||||||||||||||||||||| |||||||| |||||||||
seq2  CGTTTTACAAACAAACAAACACACACACAAG-AATCCTGC-AACTGTGTG  798

seq1  AAATGATGGGAATATGAATTATATGAAAGTTAGTACTCAGTTCACTGTGC  849
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAATGATGGGTATATGAATTATATGAAAGTTAGTACTCAGTTCACTGTGC  848

seq1  ATAACATTCAAAACATCATA-TCATATACCTGTGTAAAATATATGCTCCC  898
      |||||||||||||||||||| |||||||||||||| ||||||||||||||
seq2  ATAACATTCAAAACATCATATTCATATACCTGTGT-AAATATATGCTCCC  897

seq1  TCTTTGGCCCTGCTCAGGATTAAATTCAGGGGCTCATGGGTGCTA-GACA  947
      |||||||||   |||||||||||||||| |||||||||||||||| ||||
seq2  TCTTTGGCCTGCCTCAGGATTAAATTCA-GGGCTCATGGGTGCTAGGACA  946

seq1  AATGTTCTACCACTGAACAACACTCTCAGTC  978
      |||| |||| |||||||||||  ||||||||
seq2  AATG-TCTA-CACTGAACAACCTTCTCAGTC  975