BAC Information

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BAC

Clone NameB6Ng01-059A04
Chromosome7 (Build37)
Map Location 70,311,917 - 70,312,991
singlet/doubletsinglet
Overlap geneChrna7
Upstream geneNdn, Magel2, Mkrn3, Peg12, Atp5l-ps1, EG665038, LOC669222, LOC384631, LOC622243, EG622251
Downstream geneOtud7a, LOC545971, LOC100041386, LOC665083, Klf13, E030018B13Rik, Trpm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059A04.bB6Ng01-059A04.g
ACCDH880432DH880433
length1,1611,056
definitionDH880432|Mus musculus domesticus DNA, BAC clone: B6Ng01-059A04, 5' end.DH880433|Mus musculus domesticus DNA, BAC clone: B6Ng01-059A04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgtatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggagagctagagaaagtagccaagagctaaagggatctgcaccctata
gtggaacaacattatgagctacagtaccccgagctcttgactctagctgc
atatatatcaaagatgctagtcgcatcctgaagaaggccattggacttgc
acctatttgccagtccgggaatatcaaggccaaagggaattggtggcagg
ggagatggggt
gaattcagagttacttgagaagttgttgttgaagtagcctctcaagggct
gcaggctgcctcagttggggactgtgctggtttttcagcttctgggtctc
cgcattccaggttaaagactgtagggcaatggccttctctacttctcagt
aaccgcacagtcagagagttgtacacatatgcagtgtttcctctgcagac
gatccttgaaactctccactgttgtggatgcttgaggatgaagggccagt
aaccaaggcttggacatgtcacttcacagcctggcatctgtggactcaac
tgccacagagtatctgagttctgatgataaaactgtgaccattaggcatt
tagtttctaagccttgctttcagcaaaactaccctaaacataggcagctg
cacgtaaaagagatgctactaatttggccacttctccaagcctttgattg
attgtgtcaacagtcactgctcttgtcgctgaacagtgcagagccacttt
gtgtttagatagtttgggtgacttactgaatttcttgccattgtcattgc
taggtttgtaaataagaaaactcttatgaaaaagttcaccggccacccga
gtcctcacagacagtgtgtggaagagcctaggtctgtccgtggtatccaa
acttttcacattattcccagacatggaccttgcacagtctcaaactgtga
ctgaggaaggagccgcttctctactgagcagggcccagtgcctggggtga
gaattggggattggggaatggcagcctgtcacattggacttcattctttg
atagctaagcccctttaacttctcttgaagattttgaggatcctcaagtt
ttatgtgtatctattatagctttcagtatttaccaggttgaaaatatatg
caaatgtgatataaatctattcatttataatgataaacctactgggtggt
ataatcctggaaactactgtactttacaaacaagcacgttgagtgagaat
gtttatttttatagtttgcaaactttctcactattcattaagaagcaatc
tcaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_70311917_70312991
seq2: B6Ng01-059A04.g_66_1121 (reverse)

seq1  AATTGAGAATTGCATACTAAATGAATAGCTGAGACAAGTTTTGCAAAACT  50
      ||||||| ||||| | || ||||||||| ||||| ||| ||||| |||||
seq2  AATTGAG-ATTGC-TTCTTAATGAATAG-TGAGA-AAG-TTTGC-AAACT  44

seq1  ATAAAAAATAAACATTCTCACTCAACGTGCTATGTTTTGTAAAAGTACAG  100
      || |||||||||||||||||||||||||||| || ||||| |||||||||
seq2  AT-AAAAATAAACATTCTCACTCAACGTGCT-TG-TTTGT-AAAGTACAG  90

seq1  TAGTTTTCCAGGGAATAATATCCAACCCAGTAGGTTTATCATTATAAATG  150
      ||| ||||||||    | ||| | ||||||||||||||||||||||||||
seq2  TAG-TTTCCAGG----ATTATACCACCCAGTAGGTTTATCATTATAAATG  135

seq1  AATAGATTTTATATCACATTTTGCATATATTTTCAACCTGGTAAATACTG  200
      |||||| ||||||||||| |||||||||||||||||||||||||||||||
seq2  AATAGA-TTTATATCACA-TTTGCATATATTTTCAACCTGGTAAATACTG  183

seq1  AAAGCTATAATAGATACACATAAAACTTGAGGATCCTCAAAATCTTCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTATAATAGATACACATAAAACTTGAGGATCCTCAAAATCTTCAAG  233

seq1  AGAAGTTAAAGGGGCCTTAGCTATCAAAGAATGAAGTCCAATGTGACAGG  300
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGAAGTTAAAGGGG-CTTAGCTATCAAAGAATGAAGTCCAATGTGACAGG  282

seq1  CCTGCCATTCCCCAATCCCCAATTCTCACCCCAGGCACTGGGCCCTGCTC  350
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -CTGCCATTCCCCAATCCCCAATTCTCACCCCAGGCACTGGGCCCTGCTC  331

seq1  AGTAGAGAAGCGGCTCCTTCCTCAGTCACAGTTTGAGACTGTGCAAGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGAAGCGGCTCCTTCCTCAGTCACAGTTTGAGACTGTGCAAGGTC  381

seq1  CATGTCTGGGAATAATGTGAAAAGTTTGGATACCACGGACAGACCTAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTGGGAATAATGTGAAAAGTTTGGATACCACGGACAGACCTAGGC  431

seq1  TCTTCCACACACTGTCTGTGAGGACTCGGGTGGCCGGTGAACTTTTTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCACACACTGTCTGTGAGGACTCGGGTGGCCGGTGAACTTTTTCAT  481

seq1  AAGAGTTTTCTTATTTACAAACCTAGCAATGACAATGGCAAGAAATTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTTTCTTATTTACAAACCTAGCAATGACAATGGCAAGAAATTCAG  531

seq1  TAAGTCACCCAAACTATCTAAACACAAAGTGGCTCTGCACTGTTCAGCGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCACCCAAACTATCTAAACACAAAGTGGCTCTGCACTGTTCAGCGA  581

seq1  CAAGAGCAGTGACTGTTGACACAATCAATCAAAGGCTTGGAGAAGTGGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGCAGTGACTGTTGACACAATCAATCAAAGGCTTGGAGAAGTGGCC  631

seq1  AAATTAGTAGCATCTCTTTTACGTGCAGCTGCCTATGTTTAGGGTAGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGTAGCATCTCTTTTACGTGCAGCTGCCTATGTTTAGGGTAGTTT  681

seq1  TGCTGAAAGCAAGGCTTAGAAACTAAATGCCTAATGGTCACAGTTTTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAAGCAAGGCTTAGAAACTAAATGCCTAATGGTCACAGTTTTATC  731

seq1  ATCAGAACTCAGATACTCTGTGGCAGTTGAGTCCACAGATGCCAGGCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAACTCAGATACTCTGTGGCAGTTGAGTCCACAGATGCCAGGCTGT  781

seq1  GAAGTGACATGTCCAAGCCTTGGTTACTGGCCCTTCATCCTCAAGCATCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGACATGTCCAAGCCTTGGTTACTGGCCCTTCATCCTCAAGCATCC  831

seq1  ACAACAGTGGAGAGTTTCAAGGATCGTCTGCAGAGGAAACACTGCATATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAGTGGAGAGTTTCAAGGATCGTCTGCAGAGGAAACACTGCATATG  881

seq1  TGTACAACTCTCTGACTGTGCGGTTACTGAGAAGTAGAGAAGGCCATTGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAACTCTCTGACTGTGCGGTTACTGAGAAGTAGAGAAGGCCATTGC  931

seq1  CCTACAGTCTTTAACCTGGAATGCGGAGACCCAGAAGCTGAAAAACCAGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAGTCTTTAACCTGGAATGCGGAGACCCAGAAGCTGAAAAACCAGC  981

seq1  ACAGTCCCCAACTGAGGCAGCCTGCAGCCCTTGAGAGGCTACTTCAACAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCCCCAACTGAGGCAGCCTGCAGCCCTTGAGAGGCTACTTCAACAA  1031

seq1  CAACTTCTCAAGTAACTCTGAATTC  1075
      |||||||||||||||||||||||||
seq2  CAACTTCTCAAGTAACTCTGAATTC  1056