BAC Information

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BAC

Clone NameB6Ng01-059K04
Chromosome7 (Build37)
Map Location 77,416,607 - 77,476,631
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665410
Downstream geneNr2f2, LOC100042833, B130024G19Rik, LOC100042838, LOC665486, LOC100041957
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059K04.bB6Ng01-059K04.g
ACCDH880853DH880854
length1,112341
definitionDH880853|Mus musculus domesticus DNA, BAC clone: B6Ng01-059K04, 5' end.DH880854|Mus musculus domesticus DNA, BAC clone: B6Ng01-059K04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,416,607 - 77,417,730)(77,476,291 - 77,476,631)
sequence
gaattcactctgtagaccaggcctctttctcagagatctgcctgttggga
taaagacatgtatcaccattgcctgactgagaccgtgtgtggtggtgggg
ggcggggagcaggggtacatgatggcacataattgtctgcatatggagtg
aaattaatgtatatcatggatagatttttttttggtagttcctcctcttg
ctgcattcttgcctcaattttccacttcaaaataataatgaagttgtaag
ttagaaagtaattggatgggatggtgagatggctcagtgggtaagagcac
ccgactgctcttctgaaggtccggagttcaaatcccagcaatcacatggt
ggctcacaaccgtctgtaacaagatctgactccctcttctggagtgtctg
aagacagctacaatgtacttacatataatacataaataaatcttttttaa
aaaagaaatactattaaaaaaacgaaagtaattgggttagcatgatggta
cttggagagataaagataaaaaggattgtgagtctgaggccagcctggtc
tgagcttcacaaaaaccatatcttaacaacaacaaagagtcaggggtgag
gagaggtatccgaacctcagggggtctggtgaatgtaactgaggcacaca
gtcttttatgtggatagcttcctgggagggaacaacacatcaggacaatt
ttgcactcccacatgtgttgggatattatggctctttctcagagtgatga
tacaataattccagagtcttcacagatctgtagcaagatttttattacaa
aatatggttccttctgtgacaagaattgtacttgaaaagcatttgggcaa
atacagcttttacattctgtaagattcaaacaaagatgttgaacatgtag
atacagcctgcgtctaatcgctccaaatgtctagccatcttacgtatact
caaagaaaactaattgtgagttcacttgtgtttttatttttaaatggctg
aacacattgattctttttaattgaaagtacaggcttggttagacaacctt
ccaaccaaaatcaaatcagtttgcatcacatgatttatctgagttttgca
ctagccgcacta
cccaggattaacggggggactccttgggggcatctccgcgctccctgccc
gagccacctccgatcacctcctgccagcaaaggcccgcaagttcgggcct
ccagatcccgcgcctcccgcactgcgcgcacctctgcagtcgacctggcc
cgcccacccacgccgaggccccctctcccactcgctgagcatgcctggcg
ttaattaactcccccttcacccggtgcagtatcggaagactttcaaaact
cgtcccaaagtgtttccttctcaagcctgaaggcagcgtttggaacgacc
cgcagaaaaggggggcggggtgtggatctgggggaagggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_77416607_77417730
seq2: B6Ng01-059K04.b_42_1153

seq1  GAATTCACTCTGTAGACCAGGCCTCTTTCTCAGAGATCTGCCTGTTGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCCTCTTTCTCAGAGATCTGCCTGTTGGGA  50

seq1  TAAAGACATGTATCACCATTGCCTGACTGAGACCGTGTGTGGTGGTGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACATGTATCACCATTGCCTGACTGAGACCGTGTGTGGTGGTGGGG  100

seq1  GGCGGGGAGCAGGGGTACATGATGGCACATAATTGTCTGCATATGGAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGGGAGCAGGGGTACATGATGGCACATAATTGTCTGCATATGGAGTG  150

seq1  AAATTAATGTATATCATGGATAGATTTTTTTTTGGTAGTTCCTCCTCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAATGTATATCATGGATAGATTTTTTTTTGGTAGTTCCTCCTCTTG  200

seq1  CTGCATTCTTGCCTCAATTTTCCACTTCAAAATAATAATGAAGTTGTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTCTTGCCTCAATTTTCCACTTCAAAATAATAATGAAGTTGTAAG  250

seq1  TTAGAAAGTAATTGGATGGGATGGTGAGATGGCTCAGTGGGTAAGAGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAGTAATTGGATGGGATGGTGAGATGGCTCAGTGGGTAAGAGCAC  300

seq1  CCGACTGCTCTTCTGAAGGTCCGGAGTTCAAATCCCAGCAATCACATGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACTGCTCTTCTGAAGGTCCGGAGTTCAAATCCCAGCAATCACATGGT  350

seq1  GGCTCACAACCGTCTGTAACAAGATCTGACTCCCTCTTCTGGAGTGTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCACAACCGTCTGTAACAAGATCTGACTCCCTCTTCTGGAGTGTCTG  400

seq1  AAGACAGCTACAATGTACTTACATATAATACATAAATAAATCTTTTTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGCTACAATGTACTTACATATAATACATAAATAAATCTTTTTTAA  450

seq1  AAAAGAAATACTATTAAAAAAACGAAAGTAATTGGGTTAGCATGATGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAATACTATTAAAAAAACGAAAGTAATTGGGTTAGCATGATGGTA  500

seq1  CTTGGAGAGATAAAGATAAAAAGGATTGTGAGTCTGAGGCCAGCCTGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGAGATAAAGATAAAAAGGATTGTGAGTCTGAGGCCAGCCTGGTC  550

seq1  TGAGCTTCACAAAAACCATATCTTAACAACAACAAAGAGTCAGGGGTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTCACAAAAACCATATCTTAACAACAACAAAGAGTCAGGGGTGAG  600

seq1  GAGAGGTATCCGAACCTCAGGGGGTCTGGTGAATGTAACTGAGGCACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGTATCCGAACCTCAGGGGGTCTGGTGAATGTAACTGAGGCACACA  650

seq1  GTCTTTTATGTGGATAGCTTCCTGGGAGGGAACAACACATCAGGACAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTATGTGGATAGCTTCCTGGGAGGGAACAACACATCAGGACAATT  700

seq1  TTGCACTCCCACATGTGTTGGGATATTATGGCTCTTTCTCAGAGTGATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTCCCACATGTGTTGGGATATTATGGCTCTTTCTCAGAGTGATGA  750

seq1  TACAATAATTCCAGAGTCTTCACAGATCTGTAGCAAGA-TTTTATTACAA  799
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TACAATAATTCCAGAGTCTTCACAGATCTGTAGCAAGATTTTTATTACAA  800

seq1  AATATGGTTCCTTCTGTGACAAGAATTGTACTTGAAAAGCATTTGGGCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGGTTCCTTCTGTGACAAGAATTGTACTTGAAAAGCATTTGGGCAA  850

seq1  ATACAGCTTTTACATTCTGTAAGATTCAAACAAAGATGTTGAACATGTAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGCTTTTACATTCTGTAAGATTCAAACAAAGATGTTGAACATGTAG  900

seq1  ATACAGCCTGCGTCTAATCGCTCCAAATGTCTAGCCATCTTACGTAATAC  949
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATACAGCCTGCGTCTAATCGCTCCAAATGTCTAGCCATCTTACGT-ATAC  949

seq1  TCAAAAGAAAACTAAATGTGGAGTTCAATTTGTGTTTTTATTTTTAAATG  999
      || |||||||||||| ||| |||||| | |||||||||||||||||||||
seq2  TC-AAAGAAAACTAATTGT-GAGTTC-ACTTGTGTTTTTATTTTTAAATG  996

seq1  GCTGACACAAATTGATTCCTTTTTAATTGAAAGTTACAAGGCTTGGTTAG  1049
      ||||| ||| ||||||| ||||||||||||||| ||| ||||||||||||
seq2  GCTGA-ACACATTGATT-CTTTTTAATTGAAAG-TAC-AGGCTTGGTTAG  1042

seq1  ACAACCTCCAAAACAAAATCAAAATCAGTTTGCAATCACTTGATTTATCT  1099
      ||||||| | || ||||||| |||||||||||| ||||| ||||||||||
seq2  ACAACCTTCCAACCAAAATC-AAATCAGTTTGC-ATCACATGATTTATCT  1090

seq1  GAGTTTTGCCACCTAGCCAGCACTA  1124
      |||||||||   |||||| ||||||
seq2  GAGTTTTGC--ACTAGCC-GCACTA  1112

seq1: chr7_77476291_77476631
seq2: B6Ng01-059K04.g_74_414 (reverse)

seq1  AACCCTTCCCCCAGATCCACACCCCGCCCCCCTTTTCTGCGGGTCGTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTTCCCCCAGATCCACACCCCGCCCCCCTTTTCTGCGGGTCGTTCC  50

seq1  AAACGCTGCCTTCAGGCTTGAGAAGGAAACACTTTGGGACGAGTTTTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGCTGCCTTCAGGCTTGAGAAGGAAACACTTTGGGACGAGTTTTGAA  100

seq1  AGTCTTCCGATACTGCACCGGGTGAAGGGGGAGTTAATTAACGCCAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCCGATACTGCACCGGGTGAAGGGGGAGTTAATTAACGCCAGGCA  150

seq1  TGCTCAGCGAGTGGGAGAGGGGGCCTCGGCGTGGGTGGGCGGGCCAGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGCGAGTGGGAGAGGGGGCCTCGGCGTGGGTGGGCGGGCCAGGTC  200

seq1  GACTGCAGAGGTGCGCGCAGTGCGGGAGGCGCGGGATCTGGAGGCCCGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCAGAGGTGCGCGCAGTGCGGGAGGCGCGGGATCTGGAGGCCCGAA  250

seq1  CTTGCGGGCCTTTGCTGGCAGGAGGTGATCGGAGGTGGCTCGGGCAGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCGGGCCTTTGCTGGCAGGAGGTGATCGGAGGTGGCTCGGGCAGGGA  300

seq1  GCGCGGAGATGCCCCCAAGGAGTCCCCCCGTTAATCCTGGG  341
      |||||||||||||||||||||||||||||||||||||||||
seq2  GCGCGGAGATGCCCCCAAGGAGTCCCCCCGTTAATCCTGGG  341