BAC Information

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BAC

Clone NameB6Ng01-059L15
Chromosome7 (Build37)7 (Build37)
Map Location 14,267,026 - 14,268,05114,335,753 - 14,336,351
singlet/doubletsingletsinglet
Overlap geneLOC100042624
Upstream geneVmn2r55, LOC629079, LOC629081, EG232875, LOC100043128, LOC100042515, Zfp329, Zfp110, Zfp128, Zscan22, Rps5, 2310014L17Rik, 1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243, 9230107M04Rik, EG666256, LOC666267
Downstream geneLOC100043194, Sult2a1, EG620627, EG434121, EG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik, EG194588
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059L15.bB6Ng01-059L15.g
ACCDH880917DH880918
length1,079948
definitionDH880917|Mus musculus domesticus DNA, BAC clone: B6Ng01-059L15, 5' end.DH880918|Mus musculus domesticus DNA, BAC clone: B6Ng01-059L15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(14,267,026 - 14,268,051)(14,335,753 - 14,336,351)
sequence
gaattctttgtatttttttcaggggtgatctgtaaatttgtaatccccag
caaggcaaggtggttgtttttgttgttgttattgtttacttaatcaaaca
ttccttcaggactttgtatctaaataaaccaataggatatcatcaattta
atgatatataatggattgagaaaattatttgtgaggtcccaagcctggga
aatgtaaaaccctgcatacgtctctctgccccagctattggctgtgggca
cctgtatttaccaattgaaaataactgggggcaggttcccagaagctcca
tgctgactccaaatcttaacattagaatacaagcagcattgggctaacct
cctacaaatgtgtgtctattttcactcttctacatgtagacctatagtta
gaacagcaccatgtgttgaagatgcttttgttttttccattgtttgtttt
tggattatttgtccaaaaccaagtatgcataggcatgtgggtgtatttct
ggattttcaattttatttcaatgatcaacctgtatgttattgtcataaaa
acagacacatctatcaatggatatagcgtgaaaaatgtctaaaaaagcaa
tccatgctaccactggcaaggcaccagtggtcaggctggactgttatcgg
cacagcagactctctgacccagagctctgaaatctcttcacctggctcac
taagttcccaatgcaaattgctgccatgccaacaccacgcttcaaaaatt
ccacagctagttggggtgcacttctcacaaacccgtgctttttgcagtac
ctttctctctagaacccacttgccacgcgaagacaaacattatacaactt
agtttagaatcacaggtaacacaatcgttgggtgcagcacctagtggcct
atttgtaagctctttgattacatatcctctggaagtggatcccagtggat
ctatcactgactggggcctttggtactacatcactacatcactctccatt
caaagacttctcttctgctctcacttctttctcactggagttctgctact
cattcatgattgactccaagtggggagct
gaattcttgtcttatagaagaacagagaatgctttgatgtgctgagcctt
ctctccatatgtacctgattagttgttttaaatgtaatatttatctcatt
ttcatatatatgtatatatatatatatgtatatatatatatgaagatact
ttcatatatatataatatataaattcatccatatcttctatgttttcaag
tttagtgctctatgacttttaaggtaaactctaaaatttttcttaattac
atttgtgctgtgataatgactccccttttttgttttactgtattactttt
gacatttgctatttcttttgatgagtttaggtaagatttgatcaatattc
attatatttagaagaaaataaatttcatcaactctctatattgtttttct
tgttgctactctttccttctttaatttctacactgaggtcactgatatct
ttctagctattaagtttggagtttgctttgttctttttccaaattcccat
agtgaacattaactgctgtattagaaatcttttgatttcttaatggagga
actttgagctttaaatgtccctcttagtgctgttttcattttactccagt
gttaaatgctgttttgttttcatcttcatttgattatatgagtccttttg
ttcttgacttcttcatcattcacttgtgagttgttaaatctccatgaatt
agtgcattctggagattctcttttcatttatttgtaaccattttattgtt
gctaagtagaatataagaaaatgttttatttatattggttaataatttct
ttatatatatatttgagtgatagctccataggctgctgaaaacaacgtgt
atctacactgttagatttagtgttctaaagatgttggttaggctgcttta
tctgggacatcatttaatattgtttattttttatagatgatgtgtaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_14267026_14268051
seq2: B6Ng01-059L15.b_126_1130

seq1  GTTGTTATTGTTTACTTAATCAAACATTCCTTCAGGACTTTGTATCTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTATTGTTTACTTAATCAAACATTCCTTCAGGACTTTGTATCTAAA  50

seq1  TAAACCAATAGGATATCATCAATTTAATGATATATAATGGATTGAGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCAATAGGATATCATCAATTTAATGATATATAATGGATTGAGAAAA  100

seq1  TTATTTGTGAGGTCCCAAGCCTGGGAAATGTAAAACCCTGCATACGTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGTGAGGTCCCAAGCCTGGGAAATGTAAAACCCTGCATACGTCTC  150

seq1  TCTGCCCCAGCTATTGGCTGTGGGCACCTGTATTTACCAATTGAAAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCCCAGCTATTGGCTGTGGGCACCTGTATTTACCAATTGAAAATAA  200

seq1  CTGGGGGCAGGTTCCCAGAAGCTCCATGCTGACTCCAAATCTTAACATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGGCAGGTTCCCAGAAGCTCCATGCTGACTCCAAATCTTAACATTA  250

seq1  GAATACAAGCAGCATTGGGCTAACCTCCTACAAATGTGTGTCTATTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACAAGCAGCATTGGGCTAACCTCCTACAAATGTGTGTCTATTTTCA  300

seq1  CTCTTCTACATGTAGACCTATAGTTAGAACAGCACCATGTGTTGAAGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTACATGTAGACCTATAGTTAGAACAGCACCATGTGTTGAAGATG  350

seq1  CTTTTGTTTTTTCCATTGTTTGTTTTTGGATTATTTGTCCAAAACCAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTTTTTTCCATTGTTTGTTTTTGGATTATTTGTCCAAAACCAAGT  400

seq1  ATGCATAGGCATGTGGGTGTATTTCTGGATTTTCAATTTTATTTCAATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATAGGCATGTGGGTGTATTTCTGGATTTTCAATTTTATTTCAATGA  450

seq1  TCAACCTGTATGTTATTGTCATAAAAACAGACACATCTATCAATGGATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTGTATGTTATTGTCATAAAAACAGACACATCTATCAATGGATAT  500

seq1  AGCGTGAAAAATGTCTAAAAAAGCAATCCATGCTACCACTGGCAAGGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGAAAAATGTCTAAAAAAGCAATCCATGCTACCACTGGCAAGGCAC  550

seq1  CAGTGGTCAGGCTGGACTGTTATCGGCACAGCAGACTCTCTGACCCAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTCAGGCTGGACTGTTATCGGCACAGCAGACTCTCTGACCCAGAG  600

seq1  CTCTGAAATCTCTTCACCTGGCTCACTAAGTTCCCAATGCAAATTGCTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAAATCTCTTCACCTGGCTCACTAAGTTCCCAATGCAAATTGCTGC  650

seq1  CATGCCAACACCACGCTTCAAAAATTCCACAGCTAGTTGGGGTGCACTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCAACACCACGCTTCAAAAATTCCACAGCTAGTTGGGGTGCACTTC  700

seq1  TCACAAACCCGTGCTTTTTGCAGTACCTTTCTCTCTAGAACCCACTTGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAACCCGTGCTTTTTGCAGTACCTTTCTCTCTAGAACCCACTTGCC  750

seq1  ACGCGAAGACAAACATTATACAACTTAGTTTAGAATCAACAGGTAACACA  800
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACGCGAAGACAAACATTATACAACTTAGTTTAGAATC-ACAGGTAACACA  799

seq1  ATCGTTGGGTGCAGCACCTAGTGGCCTAATTTGTAAGCTCTTTTGAATTA  850
      ||||||||||||||||||||||||||| |||||||||||||||   ||||
seq2  ATCGTTGGGTGCAGCACCTAGTGGCCT-ATTTGTAAGCTCTTT--GATTA  846

seq1  CATATCCTCTGGAAGTGGATCCCAGTGGATCTATCACCTGAACTGGGGCC  900
      |||||||||||||||||||||||||||||||||||| ||| |||||||||
seq2  CATATCCTCTGGAAGTGGATCCCAGTGGATCTATCA-CTG-ACTGGGGCC  894

seq1  TTTGGTACCTACATCCACTACATCCACTCTCCCATTCAAAAGACTTCTCT  950
      ||||||| |||||| |||||||| |||||| |||||| ||||||||||||
seq2  TTTGGTA-CTACAT-CACTACAT-CACTCT-CCATTC-AAAGACTTCTCT  939

seq1  CCTGCTTCTCAACTTCCTTTCTCCAACCTGGAAGTTCTGCCTACTCATCC  1000
       |||| |||| |||| |||||||    |||| ||||||| |||||||| |
seq2  TCTGC-TCTC-ACTT-CTTTCTC---ACTGG-AGTTCTG-CTACTCATTC  981

seq1  AGTGATTGACTCACAAGTGGGGAGCT  1026
      | |||||||||| |||||||||||||
seq2  A-TGATTGACTC-CAAGTGGGGAGCT  1005

seq1: chr7_14335753_14336351
seq2: B6Ng01-059L15.g_69_663

seq1  GAATCCTTGTCCTATAGAAGAACAGAGAATGCTTTGAAGGGCTGAGCCTT  50
      |||| |||||| ||||||||||||||||||||||||| | ||||||||||
seq2  GAATTCTTGTCTTATAGAAGAACAGAGAATGCTTTGATGTGCTGAGCCTT  50

seq1  CTCTCCATATATACCTGATTAGTTGTTTTAAATGTAATATTTATCTCATT  100
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCATATGTACCTGATTAGTTGTTTTAAATGTAATATTTATCTCATT  100

seq1  TTCATATATATGTATGTATACATATATATATGAAGATACATTCATATATA  150
      ||||||||    |||||||| ||||||||||| | ||| ||  ||  | |
seq2  TTCATATA----TATGTATATATATATATATGTATATATATATATGAAGA  146

seq1  TATATATATGTATATATAATATATAAATTCATCCATACCTTTTATGTTTT  200
      ||  |  || ||||||||||||||||||||||||||| ||| ||||||||
seq2  TACTTTCATATATATATAATATATAAATTCATCCATATCTTCTATGTTTT  196

seq1  CAAGTTTAGTGCTCTATGACTTTTAAGGTAAACTCTAAAATTTTTCTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTAGTGCTCTATGACTTTTAAGGTAAACTCTAAAATTTTTCTTAA  246

seq1  TTTCATTTGTGCTGTGATAATGACTCCCCTTTTTTGTTTTACTGTATTAC  300
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTTGTGCTGTGATAATGACTCCCCTTTTTTGTTTTACTGTATTAC  296

seq1  TTTTGACATTTGCTATTTCTTTTGATGAGTTTAGGTAAGATTTGATCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACATTTGCTATTTCTTTTGATGAGTTTAGGTAAGATTTGATCAAT  346

seq1  ATTCATTATAATTTGAAGAAAATAACTTTTATCAACTCTCTATATTGTTT  400
      |||||||||| || ||||||||||| ||| ||||||||||||||||||||
seq2  ATTCATTATATTTAGAAGAAAATAAATTTCATCAACTCTCTATATTGTTT  396

seq1  TTCTTGTTGCTACTCTTTCCTTCTTTAATTTCTACACTGAGGTCACTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTTGCTACTCTTTCCTTCTTTAATTTCTACACTGAGGTCACTGAT  446

seq1  ATCTTTCTAGCTATTAAGTTTGGAGTTTGCTTTGTTCTTTTTCCAAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATCTTTCTAGCTATTAAGTTTGGAGTTTGCTTTGTTCTTTTTCCAAATTC  496

seq1  CCATAGTGAACATTAACTACTGTATTAGAAATCTTTTGATTTCTTAATGG  550
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCATAGTGAACATTAACTGCTGTATTAGAAATCTTTTGATTTCTTAATGG  546

seq1  AGGAACTTTGAGCTTTAAATGTCCCTCTTAGTGCTGTTTTCATTTTACT  599
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTTTGAGCTTTAAATGTCCCTCTTAGTGCTGTTTTCATTTTACT  595