BAC Information

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BAC

Clone NameB6Ng01-060D14
Chromosome7 (Build37)7 (Build37)
Map Location 7,365,621 - 7,366,5949,166,066 - 9,166,843
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1, Peg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31
Downstream geneVmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060D14.bB6Ng01-060D14.g
ACCDH881261DH881262
length1,008782
definitionDH881261|Mus musculus domesticus DNA, BAC clone: B6Ng01-060D14, 5' end.DH881262|Mus musculus domesticus DNA, BAC clone: B6Ng01-060D14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(7,365,621 - 7,366,594)(9,166,066 - 9,166,843)
sequence
gaattctttatatatattggatattagtcccctatcagatttaggattgg
taaagatcttttcccaatctgtttgttgccattttgtcttacaaacagta
tactttgtctaacagaagctttgcaatttcatgaggtctcatttgtcaat
tgtcgatcatacatcacaagccactgctgttctgttcaggaatttttccc
ctgggcccatatactcgagttttttttcccacgtattcctctataagttt
tagtttgtttttataagacagtacatattatatatatagaaatatgtatt
tatatatatatttttatttacattatagaattatatttttatattatttc
tatattacaatttatgttatatattataagtatatatttatatatttata
ttactttatattaaatatttacatatttatataagaccataagtttatat
atatgtttatattatacatgtatattgtgtattaatattatttatatatt
ataattttatatattatatattataattttatatttgtatatttatatta
tctttatattacatatttatatataatataagacatatatatatttcata
taagacagtaagtttttataagtttttataagacactattgcctatgata
gcaacattttctgacaggaccctgatacagatgtctcttgtgaggctatg
ccagtgcctggctaatccataagtggatgctcagtgtcctctattgtatg
gaacacagggcccccaatggaggagctagagaaagtaccaaaggacctga
atggttctgcaaccctataggaagaacaacaatatgaactaaccagtact
ctcagagctcatgtgtttagctgcatatgtagtagatgatgggatactcc
accatcattgggatgagaggccttgatcttgtgatgatatatgccccaga
gaggggatgccagggtctggaagcacaatgggtgggttggggagcagggt
gaaaaatt
gaattcttgactgaggaataccaaatggatgaaaagcacataaaagaatg
ttcaacatccttaatcaccagggaaatgcaaatcaaaacaaccgtgagat
tcaacctcacaccagtcagaatggctaagatcaaaaattcaggtgctagc
agatgctggcaaggatgtggtaaaagaggaacactcctccattgctgatg
ggattgcgagctggtacaaccactctggaaatcagtctggtagttcctca
gaaaattggcagaaatagtactaccggaggatccatcaatccctcccctg
ttcatatatccagaagacattccaacttgtaatatggacacatgctccac
tgtgttcatagcagccttatttataatagccagaaaattgaaagaacctg
gatgaccctcaatagaggaatggatacagaaaatttattctaataactga
tctcctctaaaataacatttattctaaattccaatcttgaattttaataa
tatttacttattctcttttacatttaagtatatgcccctgtatattttct
agtcaccttgtaagtgtaggatccagtggagaacagagaatggcaaaggt
caacaggagcgtatgagttggataggtaaatcaaggtttgaaacctgtgt
tagattaatgaagaggacaaatgatgacttgttacattaaaaataatcca
gctaaggaagttacttaagacttcatttcatgatctagacacctccattt
tctaaaattcacatgacttggaaatctaaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7365621_7366594
seq2: B6Ng01-060D14.b_156_1054

seq1  TAACAGAAGCTTTGCAATTTCATGAGGTCTCATTTGTCAATTGTCGATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGAAGCTTTGCAATTTCATGAGGTCTCATTTGTCAATTGTCGATCA  50

seq1  TACATCACAAGCCACTGCTGTTCTGTTCAGGAATTTTTCCCCTGGGCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCACAAGCCACTGCTGTTCTGTTCAGGAATTTTTCCCCTGGGCCCA  100

seq1  TATACTCGAGTTTTTTTTTCCCACGTATTCCTCTATAAGTTTTAGTTTGT  150
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TATACTCGAG-TTTTTTTTCCCACGTATTCCTCTATAAGTTTTAGTTTGT  149

seq1  TTTTATAAGACACTACATAT--TATATATAGAAATATGTATT--TATATA  196
      |||||||||||| |||||||  ||||||||||||||||||||  ||||||
seq2  TTTTATAAGACAGTACATATTATATATATAGAAATATGTATTTATATATA  199

seq1  TATTTTTATTTACATTATAGAATTATATTTTTATATTATTTCTATATTAC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTATTTACATTATAGAATTATATTTTTATATTATTTCTATATTAC  249

seq1  AATTTATGTTATATATTATAAGTATACATTTATATATTTATATTACTTTA  296
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AATTTATGTTATATATTATAAGTATATATTTATATATTTATATTACTTTA  299

seq1  TATTAAATATTTACATATTTATATAAGACCATAAGTTTATATATATGTTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAATATTTACATATTTATATAAGACCATAAGTTTATATATATGTTT  349

seq1  ATATTATACATGTATATTGTGTATTAATATTATTTATATATTATAATTTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATACATGTATATTGTGTATTAATATTATTTATATATTATAATTTT  399

seq1  ATATATTATATATTATAATTTTATATTTGTATATTTATATTATCTTTATA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTATATATTATAATTTTATATTTGTATATTTATATTATCTTTATA  449

seq1  TTAAATATTTATATATAATATAAGACATATATATATATATATATATATCA  496
      ||| ||||||||||||||||||||||          |||||||||| |||
seq2  TTACATATTTATATATAATATAAGAC----------ATATATATATTTCA  489

seq1  TATAAGACAGTAAGTTTTTATAAGTTTTTATAAGACACTATTGCCTATGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGACAGTAAGTTTTTATAAGTTTTTATAAGACACTATTGCCTATGA  539

seq1  TAGCAACATTTTCTGACAGGACCCTGATACAGATGTCTCTTGTGAGGCTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAACATTTTCTGACAGGACCCTGATACAGATGTCTCTTGTGAGGCTA  589

seq1  TGCCAGTGCCTGGCTAATCCATAAGTGGATGCTCAGTGTCCTCTATTGTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGTGCCTGGCTAATCCATAAGTGGATGCTCAGTGTCCTCTATTGTA  639

seq1  TGGAACACAGGGACCCCAATGGAGGAGCTAGAGAAAGTACCAAAGGACCT  696
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGGAACACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTACCAAAGGACCT  689

seq1  GAATGGTTCTGCAACCCTATAGGAAGAACAACAATATGAACTAACCAGTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGTTCTGCAACCCTATAGGAAGAACAACAATATGAACTAACCAGTA  739

seq1  CTCCCAGAGCTCATGTGTTTAGCTGCATATGTAGTAGATGATGGGATACT  796
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGAGCTCATGTGTTTAGCTGCATATGTAGTAGATGATGGGATACT  789

seq1  CCACCATCATTGAGATGAGAGGCCCTTGATCTTGTGATGATTATATGCCC  846
      |||||||||||| ||||||||| ||||||||||||||||| |||||||||
seq2  CCACCATCATTGGGATGAGAGG-CCTTGATCTTGTGATGA-TATATGCCC  837

seq1  CAGTAGAGGGGAATGCCAGGGTCTGGAAGCACGAGTGGGTGGGTTGGGGA  896
      ||| ||||||| |||||||||||||||||||| | |||||||||||||||
seq2  CAG-AGAGGGG-ATGCCAGGGTCTGGAAGCAC-AATGGGTGGGTTGGGGA  884

seq1  GCAGGGTGGAGAGAGTATATAGGGGATAGTATTTGAAATGTAAATGAAGA  946
      ||||||| || | | |                                  
seq2  GCAGGGT-GAAAAATT----------------------------------  899

seq1  AAATATCTAAAAAAATAATAAAAAAATT  974
                                  
seq2  ----------------------------  899

seq1: chr7_9166066_9166843
seq2: B6Ng01-060D14.g_69_850

seq1  GAATTCTTGACTGAGGAATACCAAATGGATGAAAAGCACATAAAAGAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGACTGAGGAATACCAAATGGATGAAAAGCACATAAAAGAATG  50

seq1  TTCAACATCCTTAATCACCAGGGAAATGCAAATCAAAACAACCGTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATCCTTAATCACCAGGGAAATGCAAATCAAAACAACCGTGAGAT  100

seq1  TCAACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGCTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGCTAGC  150

seq1  AGATGCTGGCAAGGATGTGGTAAAAGAGGAACACTCCTCCATTGCTGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGGCAAGGATGTGGTAAAAGAGGAACACTCCTCCATTGCTGATG  200

seq1  GGATTGCGAGCTGGTACAACCACTCTGGAAATCAGTCTGGTAGTTCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCGAGCTGGTACAACCACTCTGGAAATCAGTCTGGTAGTTCCTCA  250

seq1  GAAAATTGGCAGAAATAGTACTACCGGAGGATCCATCAATCCCTCCCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTGGCAGAAATAGTACTACCGGAGGATCCATCAATCCCTCCCCTG  300

seq1  TTCATATATCCAGAAGACATTCCAACTTGTAATATGGACACATGCTCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATATCCAGAAGACATTCCAACTTGTAATATGGACACATGCTCCAC  350

seq1  TGTGTTCATAGCAGCCTTATTTATAATAGCCAGAAAATTGAAAGAACCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCATAGCAGCCTTATTTATAATAGCCAGAAAATTGAAAGAACCTG  400

seq1  GATGACCCTCAATAGAGGAATGGATACAGAAAATTTATTCTAATAACTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACCCTCAATAGAGGAATGGATACAGAAAATTTATTCTAATAACTGA  450

seq1  TCTCCTCTAAAATAACATTTATTCTAAATTCCAATCTTGAATTTTAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCTAAAATAACATTTATTCTAAATTCCAATCTTGAATTTTAATAA  500

seq1  TATTTACTTATTCTCTTTTACATTTAAGTATATGCCCCTGTATATTTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACTTATTCTCTTTTACATTTAAGTATATGCCCCTGTATATTTTCT  550

seq1  AGTCACCTTGTAAGTGTAGGATCCAGTGGAGAACAGAGAATGGCAAAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACCTTGTAAGTGTAGGATCCAGTGGAGAACAGAGAATGGCAAAGGT  600

seq1  CAACAGGAGCGTATGAGTTGGATAGGTAAATCAAGGTTTGAAACCTGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGGAGCGTATGAGTTGGATAGGTAAATCAAGGTTTGAAACCTGTGT  650

seq1  TAGATTAATGAAGAGGACAAATGATGACTTGTTACATT-AAAAGAATCCA  699
      |||||||||||||||||||||||||||||||||||||| |||| ||||||
seq2  TAGATTAATGAAGAGGACAAATGATGACTTGTTACATTAAAAATAATCCA  700

seq1  GCTAAGGAAGTTACTTAAGACTTCA-TTCATGATCTAGACACCTCCA-TT  747
      ||||||||||||||||||||||||| ||||||||||||||||||||| ||
seq2  GCTAAGGAAGTTACTTAAGACTTCATTTCATGATCTAGACACCTCCATTT  750

seq1  TCTAAAATTCACATGACTT-GATATCTAAATT  778
      ||||||||||||||||||| || ||||||| |
seq2  TCTAAAATTCACATGACTTGGAAATCTAAAAT  782