BAC Information

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BAC

Clone NameB6Ng01-060G12
Chromosome7 (Build37)
Map Location 7,162,918 - 7,274,228
singlet/doubletdoublet
Overlap gene6430701C03Rik, Clcn4-2, V2r15
Upstream geneGalp, Zfp371, EG627821, Zfp667, Zfp583, LOC100042467, LOC100042459, Zfp78, Zfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1, Peg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179
Downstream geneLOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060G12.bB6Ng01-060G12.g
ACCDH881386DH881387
length1,069488
definitionDH881386|Mus musculus domesticus DNA, BAC clone: B6Ng01-060G12, 5' end.DH881387|Mus musculus domesticus DNA, BAC clone: B6Ng01-060G12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,273,136 - 7,274,228)(7,162,918 - 7,163,410)
sequence
gaattccttggacaaagtgatgttatatgtaaatgggaattctacacaaa
caccctgaaatagactgtccttttcaaagccagccaaaacataaaaatct
ggtagtcaaacactgttggtaccttcttttatcactgattaaccatagca
taattaccaaatacaagggacagtaggaaaatttttgtgactcacaaatg
ccctgttctcctacctcgaaattaatcttatataaactgaatgtactcag
gacaatgtgaaaatataatcacattgatatttgagcccaaatgagaccaa
ctcattgattccacttgtctattcaatctattgtagacaggatttcttga
ggtttgtgggatgagaccaattctcagcgttgcttgcaaactaatcagag
ttaatacacctccacaactgctgataatcctggcttgctcattctttttt
ctactttggatttttgtcaactctttatcattcactctgaaaattgttat
ttttggagctgtgctacttataaaatatttaggaagcactacatggcaat
aaatgagtgttagatactcctcatatgtatctatgtggcgcaatgcatga
aaatataagtatcattaatcgcagtatactttaatacaagtttatataat
attaaatatatgtatatatatatgtatacacacacacacacaaatttatt
attttttacctttgtgccttgaatagggcctgatatgtagtacggctttt
atggggaaaatttgcaatcatattcctaacattcaactggtataaaacag
actaaagccaaaaaaaaatcaaaaacaaaaaatcaaaacaaacaaaacaa
aaactatatttattatcaggctgtcatggaactcattctgtagaccatga
tggcctcaaatcaaaaatctgcctgcctttgctgccaagtgctgggatta
aaggtgtgtgccaccactgcccagctgccttgactataaagtagacatat
aagcctttacaaaaataaataaaaataaaaaaacctgctctattttactg
ttgtattatatcttagagt
cagaactgctggcagaggcaagttgatgtttgggattagaaactagcctg
tcacagtgagttccagaccagacagaaaaccttacagagtgaacatgacc
ctaagctgggccatgtgaggagaggagatctgaaaagagaaagaggggcc
tccaaccaagagggaccacctgagccaagagactagcacagctaaaagtg
gctgagttatagagtggtcagaggagctggaaggaggaaagcccagggga
tcacctggactggggagtttgggctgtgtggtggctgggggttgggggga
ggcatgccagccaggaacagagggatgctgagaggccactgtccagtttg
atatgttaatggacactttagttcaacatttttgccttggatttaagacc
caacaggttataggtctttgtgtgaatgatacctgacaggtcttcttgca
aagtaaacttaggaaattaccatacaggaagaaagaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7273136_7274228
seq2: B6Ng01-060G12.b_46_1114 (reverse)

seq1  ACTCTAAGAATATAATAAACAACAGTAAAATAAGAGCAGGTTTTTTTTTT  50
      |||||||| |||||||  ||||||||||||| ||||||||||||||| ||
seq2  ACTCTAAG-ATATAAT--ACAACAGTAAAAT-AGAGCAGGTTTTTTTATT  46

seq1  ATTTTTTATTTTTATTTTTTTGTAAAGGCTTTATATGTCTTACTTTTATT  100
       || ||||        ||||||||||||| ||||||||| ||| ||||| 
seq2  TTTATTTA--------TTTTTGTAAAGGC-TTATATGTC-TAC-TTTAT-  84

seq1  AAGTCAAAGGCAGCTGGGCAGTGGTGGCACACACCTTTAATCCCAGCACT  150
       |||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  -AGTC-AAGGCAGCTGGGCAGTGGTGGCACACACCTTTAATCCCAGCACT  132

seq1  TGGCAGGCAAAGGCAGGCAGATTTTTGATTTTGAGGCCATCATGGTCTAC  200
      ||||| |||||||||||||||||||||| |||||||||||||||||||||
seq2  TGGCA-GCAAAGGCAGGCAGATTTTTGA-TTTGAGGCCATCATGGTCTAC  180

seq1  AGAATGAGTTCCATGACAGCCTGATAATAAATATAGTTTTTTGTTTTGTT  250
      |||||||||||||||||||||||||||||||||||| ||||||||||| |
seq2  AGAATGAGTTCCATGACAGCCTGATAATAAATATAG-TTTTTGTTTTG-T  228

seq1  TTGTTTTGATTTTTTTGTTTTTGATTTTTTTTTTGGCTTTAGTCTGTTTT  300
      ||||||||| |||||||||||||| |||||||||||||||||||||||||
seq2  TTGTTTTGA-TTTTTTGTTTTTGA-TTTTTTTTTGGCTTTAGTCTGTTTT  276

seq1  ATACCAGTTGAATGTTAGGAATATGATTGCAAATTTTCCCCATAAAAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGTTGAATGTTAGGAATATGATTGCAAATTTTCCCCATAAAAGCC  326

seq1  GTACTACATATCAGGCCCTATTCAAGGCACAAAGGTAAAAAATAATAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTACATATCAGGCCCTATTCAAGGCACAAAGGTAAAAAATAATAAAT  376

seq1  TTGTGTGTGTGTGTGTATACATATATATATACATATATTTAATATTATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGTGTGTGTGTATACATATATATATACATATATTTAATATTATAT  426

seq1  AAACTTGTATTAAAGTATACTGCGATTAATGATACTTATATTTTCATGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGTATTAAAGTATACTGCGATTAATGATACTTATATTTTCATGCA  476

seq1  TTGCGCCACATAGATACATATGAGGAGTATCTAACACTCATTTATTGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGCCACATAGATACATATGAGGAGTATCTAACACTCATTTATTGCCA  526

seq1  TGTAGTGCTTCCTAAATATTTTATAAGTAGCACAGCTCCAAAAATAACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTGCTTCCTAAATATTTTATAAGTAGCACAGCTCCAAAAATAACAA  576

seq1  TTTTCAGAGTGAATGATAAAGAGTTGACAAAAATCCAAAGTAGAAAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGAGTGAATGATAAAGAGTTGACAAAAATCCAAAGTAGAAAAAAG  626

seq1  AATGAGCAAGCCAGGATTATCAGCAGTTGTGGAGGTGTATTAACTCTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGCAAGCCAGGATTATCAGCAGTTGTGGAGGTGTATTAACTCTGAT  676

seq1  TAGTTTGCAAGCAACGCTGAGAATTGGTCTCATCCCACAAACCTCAAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTGCAAGCAACGCTGAGAATTGGTCTCATCCCACAAACCTCAAGAA  726

seq1  ATCCTGTCTACAATAGATTGAATAGACAAGTGGAATCAATGAGTTGGTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTCTACAATAGATTGAATAGACAAGTGGAATCAATGAGTTGGTCT  776

seq1  CATTTGGGCTCAAATATCAATGTGATTATATTTTCACATTGTCCTGAGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGGCTCAAATATCAATGTGATTATATTTTCACATTGTCCTGAGTA  826

seq1  CATTCAGTTTATATAAGATTAATTTCGAGGTAGGAGAACAGGGCATTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGTTTATATAAGATTAATTTCGAGGTAGGAGAACAGGGCATTTGT  876

seq1  GAGTCACAAAAATTTTCCTACTGTCCCTTGTATTTGGTAATTATGCTATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCACAAAAATTTTCCTACTGTCCCTTGTATTTGGTAATTATGCTATG  926

seq1  GTTAATCAGTGATAAAAGAAGGTACCAACAGTGTTTGACTACCAGATTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATCAGTGATAAAAGAAGGTACCAACAGTGTTTGACTACCAGATTTT  976

seq1  TATGTTTTGGCTGGCTTTGAAAAGGACAGTCTATTTCAGGGTGTTTGTGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTTGGCTGGCTTTGAAAAGGACAGTCTATTTCAGGGTGTTTGTGT  1026

seq1  AGAATTCCCATTTACATATAACATCACTTTGTCCAAGGAATTC  1093
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCCCATTTACATATAACATCACTTTGTCCAAGGAATTC  1069

seq1: chr7_7162918_7163410
seq2: B6Ng01-060G12.g_67_559

seq1  GAATTCCAGAACTGCTGGCAGAGGCAAGTTGATGTTTGGGATTAGAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAACTGCTGGCAGAGGCAAGTTGATGTTTGGGATTAGAAACT  50

seq1  AGCCTGTCACAGTGAGTTCCAGACCAGACAGAAAACCTTACAGAGTGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGTCACAGTGAGTTCCAGACCAGACAGAAAACCTTACAGAGTGAAC  100

seq1  ATGACCCTAAGCTGGGCCATGTGAGGAGAGGAGATCTGAAAAGAGAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCCTAAGCTGGGCCATGTGAGGAGAGGAGATCTGAAAAGAGAAAGA  150

seq1  GGGGCCTCCAACCAAGAGGGACCACCTGAGCCAAGAGACTAGCACAGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCTCCAACCAAGAGGGACCACCTGAGCCAAGAGACTAGCACAGCTA  200

seq1  AAAGTGGCTGAGTTATAGAGTGGTCAGAGGAGCTGGAAGGAGGAAAGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGCTGAGTTATAGAGTGGTCAGAGGAGCTGGAAGGAGGAAAGCCC  250

seq1  AGGGGATCACCTGGACTGGGGAGTTTGGGCTGTGTGGTGGCTGGGGGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGATCACCTGGACTGGGGAGTTTGGGCTGTGTGGTGGCTGGGGGTTG  300

seq1  GGGGGAGGCATGCCAGCCAGGAACAGAGGGATGCTGAGAGGCCACTGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAGGCATGCCAGCCAGGAACAGAGGGATGCTGAGAGGCCACTGTCC  350

seq1  AGTTTGATATGTTAATGGACACTTTAGTTCAACATTTTTGCCTTGGATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGATATGTTAATGGACACTTTAGTTCAACATTTTTGCCTTGGATTT  400

seq1  AAGACCCAACAGGTTATAGGTCTTTGTGTGAATGATACCTGACAGGTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCCAACAGGTTATAGGTCTTTGTGTGAATGATACCTGACAGGTCTT  450

seq1  CTTGCAAAGAAAACTTAGGAAATTACCATAGAGGAAGAAAGAA  493
      ||||||||| |||||||||||||||||||| ||||||||||||
seq2  CTTGCAAAGTAAACTTAGGAAATTACCATACAGGAAGAAAGAA  493