BAC Information

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BAC

Clone NameB6Ng01-060H10
Chromosome7 (Build37)
Map Location 29,549,194 - 29,675,571
singlet/doubletdoublet
Overlap geneNfkbib, Sirt2, 5830482F20Rik, Hnrpl, Ech1, Lgals4, Lgals7, Capn12
Upstream geneLOC100043229, LOC100043233, 4933426I21Rik, Zfp59, 4732475C15Rik, Prkcz2, 1700049G17Rik, EG668175, LOC100043771, Zfp780b, C130069I09Rik, LOC100043772, Psmc4, LOC100043774, 9530053A07Rik, Fbl, Dyrk1b, Eid2, LOC434156, BC089491, Dll3, Timm50, Supt5h, Rps16, Plekhg2, Zfp36, Ixl, Paf1, Samd4b, 1700085B13Rik, Gmfg, Lrfn1, LOC624672, 1700028B04Rik, EG330496, Il28, Sycn, 1190020J12Rik, Pak4, C330005M16Rik, Fbxo27, Fbxo17, Mrps12, Sars2, EG624918
Downstream geneActn4, Eif3s12, Map4k1, Ryr1, Rasgrp4, 1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6, Yif1b, Spint2, Ppp1r14a, Neud4, Sipa1l3, LOC100043791, 4932431P20Rik, 4930432E11Rik, 1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060H10.bB6Ng01-060H10.g
ACCDH881430DH881431
length1,073774
definitionDH881430|Mus musculus domesticus DNA, BAC clone: B6Ng01-060H10, 5' end.DH881431|Mus musculus domesticus DNA, BAC clone: B6Ng01-060H10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,674,487 - 29,675,571)(29,549,194 - 29,549,965)
sequence
gaattccaacaggaaccagaggcagctctagatcactacatttggtgccc
tcagagggccactatggggtgacagggactttatatcctcgttggcagtg
ccccctttgtccatccacacaatatcagtgtctagaaggaggcagctgct
ctcaaccctcacctacctgccatgacatgagatggccccagagctcctgg
aagtggtgtagggacagtctttgcccacgctgcaagtgaggacacctggt
tacaatcaatgtcccctaaaaggcaaggaaaagcccagcatccctgtccc
tcctctccatatactaccccacgtaccccaaaacactgcacaagctgttc
gcaggtcctaagcccaatctctccaggggtcctggtgttggccctcgctg
caaaaaaatccagcaccccttgcatgtaggccaacactgcaagagcactg
cagactaactccctgcagtgggcatatcatagaagcaggtgctgagagtt
catgcctgaagaaccaaccaagctggggttctacatttctgcccccacct
cttagaggaagtggggcgtggctgcgagtgatcatggccctcacataacc
ttgtaggaagtcctgttcctgtgcctggcgccctagcttcatcacacata
gagcctgtatagctatggtgcttcagttgcaaggacccccacctcaacct
ccagccaaactcaccaggttccagagcaatgcttattaaggtctgcagct
gaagcgcgttgagttcctcctcctaatcaggaaagaaccactcaaaacat
ccagccaacaatccactctgggccaggccctgtgctccataggactgacg
gcatggctgtggctgccttcctagggttcagctagaggaggcaggcctgt
cctcagagtggtcagacagtggtgggagacacactggtggggcccaccgt
ggccagtgacagaggaagcacttgggaagagttttgagtctggcagggat
gggaatcttcagagaaggagtgcagactcagcaaagcttgagacaatttg
agcattccagaataagaaaagat
gaattccaggacagccaaggctacacagagaaacccaatctcaaaaaacc
aaaaataaataaaataaaccaaagaaaaatttcataatgtgtagacagaa
tctcttataggcaacacctgtcaataaaaaagcaaacggccaatgagctg
aagcaggaaataggaggtgggacactggcaggaaaagaaaggattctggg
aaatagtgagagaataaaaggagacacagggagagacactggaggagtca
ctgagagagacaccgagaaagacgatgctaaggaagaagcaggcccgaga
ctgaaggaaaacatagaatgatttaaatgggttaaataagttatgtgtta
gctatggaatgggccaaagcttgtagccaaggcatttattaataaatagt
taatgccagagtccttattgttgggaattaagtggccggaagaaaaaaaa
aaaaggattcatttttttttacagtagtgttcaaggctagcctgggctac
atagtgagacactgacttaaaaggggggtggggttggaggctgggaaatg
ttttgctaagtaaagcacagtgaccttagtttagaacccacataagaaaa
agctgggtgtgattgtaagtatttatagtcccaacactagggaggagaac
cctggaatggagcacagtggtgcgcgtctttgatcccagcactccggagg
cagaggcaggtggatgagttttgaggccagcttggtttacatagtgagtt
ccaggtcaagcccccctgtctcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_29674487_29675571
seq2: B6Ng01-060H10.b_43_1115 (reverse)

seq1  ATCTTTTCTTTATTCTGGGAATGCTCAAATTGTCTCAAGGCCTTTGCTGG  50
      |||||||| ||||||| ||||||||||||||||||||||  |||||||| 
seq2  ATCTTTTC-TTATTCT-GGAATGCTCAAATTGTCTCAAG--CTTTGCTGA  46

seq1  GTCTGCACCTCCTTCCTCTGAAGGTTCCCATCCCCTGCCAGACTCAAAAC  100
      ||||||| |||||| |||||||| ||||||| ||||||||||||||||||
seq2  GTCTGCA-CTCCTT-CTCTGAAGATTCCCAT-CCCTGCCAGACTCAAAAC  93

seq1  ATCTTTCCCAAGTGCCTTCCTCTGTCACTTGCCCACGGTGGGCCCCCACA  150
       || |||||||||| ||||||||||||| || ||||||||||||||  ||
seq2  -TC-TTCCCAAGTG-CTTCCTCTGTCAC-TGGCCACGGTGGGCCCCACCA  139

seq1  GTGTGTCTCCCACCACTGTCCTGACCACTCTGAGGACAGGCCTGCCTCCT  200
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTGTGTCTCCCACCACTGT-CTGACCACTCTGAGGACAGGCCTGCCTCCT  188

seq1  CTAGCTGGACCCTAGGAAGGCAGCCACAGCCATGCCGTCAGTCCTATGGA  250
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTGAACCCTAGGAAGGCAGCCACAGCCATGCCGTCAGTCCTATGGA  238

seq1  GCACAGGGCCTGGCCCAGAGTGGATTGTTGGCTGGATGTTTTGAGTGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGGGCCTGGCCCAGAGTGGATTGTTGGCTGGATGTTTTGAGTGGTT  288

seq1  CTTTCCTGATTAGGAGGAGGAACTCAACGCGCTTCAGCTGCAGACCTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTGATTAGGAGGAGGAACTCAACGCGCTTCAGCTGCAGACCTTAA  338

seq1  TAAGCATTGCTCTGGAACCTGGTGAGTTTGGCTGGAGGTTGAGGTGGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATTGCTCTGGAACCTGGTGAGTTTGGCTGGAGGTTGAGGTGGGGG  388

seq1  TCCTTGCAACTGAAGCACCATAGCTATACAGGCTCTATGTGTGATGAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGCAACTGAAGCACCATAGCTATACAGGCTCTATGTGTGATGAAGC  438

seq1  TAGGGCGCCAGGCACAGGAACAGGACTTCCTACAAGGTTATGTGAGGGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCGCCAGGCACAGGAACAGGACTTCCTACAAGGTTATGTGAGGGCC  488

seq1  ATGATCACTCGCAGCCACGCCCCACTTCCTCTAAGAGGTGGGGGCAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCACTCGCAGCCACGCCCCACTTCCTCTAAGAGGTGGGGGCAGAAA  538

seq1  TGTAGAACCCCAGCTTGGTTGGTTCTTCAGGCATGAACTCTCAGCACCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAACCCCAGCTTGGTTGGTTCTTCAGGCATGAACTCTCAGCACCTG  588

seq1  CTTCTATGATATGCCCACTGCAGGGAGTTAGTCTGCAGTGCTCTTGCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATGATATGCCCACTGCAGGGAGTTAGTCTGCAGTGCTCTTGCAGT  638

seq1  GTTGGCCTACATGCAAGGGGTGCTGGATTTTTTTGCAGCGAGGGCCAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCCTACATGCAAGGGGTGCTGGATTTTTTTGCAGCGAGGGCCAACA  688

seq1  CCAGGACCCCTGGAGAGATTGGGCTTAGGACCTGCGAACAGCTTGTGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACCCCTGGAGAGATTGGGCTTAGGACCTGCGAACAGCTTGTGCAG  738

seq1  TGTTTTGGGGTACGTGGGGTAGTATATGGAGAGGAGGGACAGGGATGCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGGGGTACGTGGGGTAGTATATGGAGAGGAGGGACAGGGATGCTG  788

seq1  GGCTTTTCCTTGCCTTTTAGGGGACATTGATTGTAACCAGGTGTCCTCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTCCTTGCCTTTTAGGGGACATTGATTGTAACCAGGTGTCCTCAC  838

seq1  TTGCAGCGTGGGCAAAGACTGTCCCTACACCACTTCCAGGAGCTCTGGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGCGTGGGCAAAGACTGTCCCTACACCACTTCCAGGAGCTCTGGGG  888

seq1  CCATCTCATGTCATGGCAGGTAGGTGAGGGTTGAGAGCAGCTGCCTCCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCATGTCATGGCAGGTAGGTGAGGGTTGAGAGCAGCTGCCTCCTT  938

seq1  CTAGACACTGATATTGTGTGGATGGACAAAGGGGGCACTGCCAACGAGGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACACTGATATTGTGTGGATGGACAAAGGGGGCACTGCCAACGAGGA  988

seq1  TATAAAGTCCCTGTCACCCCATAGTGGCCCTCTGAGGGCACCAAATGTAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGTCCCTGTCACCCCATAGTGGCCCTCTGAGGGCACCAAATGTAG  1038

seq1  TGATCTAGAGCTGCCTCTGGTTCCTGTTGGAATTC  1085
      |||||||||||||||||||||||||||||||||||
seq2  TGATCTAGAGCTGCCTCTGGTTCCTGTTGGAATTC  1073

seq1: chr7_29549194_29549965
seq2: B6Ng01-060H10.g_69_842

seq1  GAATTCCAGGACAGCCAAGGCTACACAGAGAAACCCAATCTCAAAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAAGGCTACACAGAGAAACCCAATCTCAAAAAACC  50

seq1  AAAAATAAATAAAATAAACCAAAGAAAAATTTCATAATGTGTAGACAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAATAAAATAAACCAAAGAAAAATTTCATAATGTGTAGACAGAA  100

seq1  TCTCTTATAGGCAACACCTGTCAATAAAAAAGCAAACGGCCAATGAGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTATAGGCAACACCTGTCAATAAAAAAGCAAACGGCCAATGAGCTG  150

seq1  AAGCAGGAAATAGGAGGTGGGACACTGGCAGGAAAAGAAAGGATTCTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGAAATAGGAGGTGGGACACTGGCAGGAAAAGAAAGGATTCTGGG  200

seq1  AAATAGTGAGAGAATAAAAGGAGACACAGGGAGAGACACTGGAGGAGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTGAGAGAATAAAAGGAGACACAGGGAGAGACACTGGAGGAGTCA  250

seq1  CTGAGAGAGACACCGAGAAAGACGATGCTAAGGAAGAAGCAGGCCCGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGAGACACCGAGAAAGACGATGCTAAGGAAGAAGCAGGCCCGAGA  300

seq1  CTGAAGGAAAACATAGAATGATTTAAATGGGTTAAATAAGTTATGTGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGAAAACATAGAATGATTTAAATGGGTTAAATAAGTTATGTGTTA  350

seq1  GCTATGGAATGGGCCAAAGCTTGTAGCCAAGGCATTTATTAATAAATAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGGAATGGGCCAAAGCTTGTAGCCAAGGCATTTATTAATAAATAGT  400

seq1  TAATGCCAGAGTCCTTATTGTTGGGAATTAAGTGGCCGGAAGAAAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCCAGAGTCCTTATTGTTGGGAATTAAGTGGCCGGAAGAAAAAAAA  450

seq1  AAAAGGATTCATTTTTTTTTACAGTAGTGTTCAAGGCTAGCCTGGGCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGATTCATTTTTTTTTACAGTAGTGTTCAAGGCTAGCCTGGGCTAC  500

seq1  ATAGTGAGACACTGACTTAAAAGGGGGGTGGGGTTGGAGGCTGGGAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGAGACACTGACTTAAAAGGGGGGTGGGGTTGGAGGCTGGGAAATG  550

seq1  TTTTGCTAAGTAAAGCACAGTGACCTTAGTTTAGAACCCACATAAGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTAAGTAAAGCACAGTGACCTTAGTTTAGAACCCACATAAGAAAA  600

seq1  AGCTGGGTGTGATTGTAAGTATTTATAGTCCCAACACTAGGGAGGAGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGTGTGATTGTAAGTATTTATAGTCCCAACACTAGGGAGGAGAAC  650

seq1  CCTGGAATGGAGCACAGTGGTGCGCGCCTTTGATCCCAGCACTCCGGAGG  700
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCTGGAATGGAGCACAGTGGTGCGCGTCTTTGATCCCAGCACTCCGGAGG  700

seq1  CAGAGGCAGGTGGATGAG-TTTGAGGCCAGCTTGGTTTACATAGTGAGTT  749
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CAGAGGCAGGTGGATGAGTTTTGAGGCCAGCTTGGTTTACATAGTGAGTT  750

seq1  CCAGG-CCAGCCACCCTGTCTCAA  772
      ||||| | |||| |||||||||||
seq2  CCAGGTCAAGCCCCCCTGTCTCAA  774