BAC Information

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BAC

Clone NameB6Ng01-060H16
Chromosome7 (Build37)
Map Location 102,503,368 - 102,548,584
singlet/doubletdoublet
Overlap genenone
Upstream geneEG666816, LOC100040132
Downstream geneLOC666823, Frda-ps, EG666836, Odz4, LOC670727
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060H16.bB6Ng01-060H16.g
ACCDH881442DH881443
length1,1751,121
definitionDH881442|Mus musculus domesticus DNA, BAC clone: B6Ng01-060H16, 5' end.DH881443|Mus musculus domesticus DNA, BAC clone: B6Ng01-060H16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,547,392 - 102,548,584)(102,503,368 - 102,504,487)
sequence
gaattctcccttggtcaggtgtgtgtttgtctagaaaaatcctctgagag
tgatcagcaattagggagctaatgcaaaattgccaaccaacaaaatctgt
gaccggaccaaggacaatggagtagagaattccagagctttattaagaac
aaatcatgcccgaacattttgataggttctttgatagcagctgcctgatt
cctgccacacttgctccattgctttctcattgccttctaaatcaatttaa
aatgccttcttttgagctgaccttcaaggctcttctgtgtttagtgttat
cacttgcctttcctctttcctctcatttttcctttggtattcctcctggc
tctttgactttggttatcatctctgactttatacagaattttatgtcata
agcctacgtacgacactgtccctattctaaaatcggaggcaaagtcatct
atctactcagtcctacacatcctttgaggtcttgctcttcttctggaagc
catctggtctaggccagcttacaattctggagttaaaatctttcattcct
tgttatttgtggtacaatcattacttacttttctgtaatatgctttctgg
tttcttttttaaattttcaatttttctcctattaggttgtgaatccagat
gctagaattaaaattctactaaaattctagccgttttttgtctgttatgt
ttactcatgtttcttctataaaaaacatatatacaatgtacccccagacc
cactctgtgtctcagacccactctctgtctctgtctctttctgtctgtct
ctgtctctctctttctctcttacacataccttatgtaacaccccaaaata
taacctgccttaaaatagatgctaaaaacaaagattattgataaaatggt
acagaatgtggtagaccaaatactgaataaacaaactttatttgaagcag
cattggctggcttttttatgttataagtgccttttcttacagaaattgcc
catgaataagaattggtttcagaaacatttctggattctgggtaattttt
cactgttatttatcttctttcactttaaaaaaaacaattaacatacgaaa
gcttatttttcttctacattatatgctcagtgatagcttatcaattgtga
tcttataatcttaaggaggtgaaaa
gaattctgagccttcagggagctgctgctgctggtgctgcccgtttcccc
aagtcttttgttgcagtcaatttttaaaaaaatgaaatgatagatttcca
cattccttaactcatactacaaccttgtcctaggatttgggtatacaggg
atcaattaggtcatttccttactctaagcatttgaacctcagagtgttgt
tgaggttccctcctgcagggatgcacatgcagtgtgagagagaccatcct
acagggatgctcatgcagtgtgagagagaccatgctacagggatgctcat
gcaatgtgggagagcctcctgcagggatgctctcgcagtgtgggagcgcc
tcctgcagggatgcacatgcagtgtgtgagaggtcatcctacagggatgc
tcatgcagtgtgtggcaaaggccaggctgtatggattctggagctgtggg
ccaagacatcttgtgaaagattaggaaagagcaaagatgtggatggaatg
gggcttggtatgttcccaatcctaacaaaacactgatcatagttcttttc
tcttaaaatactcacaaaaaggccagcagtggtggcacactcctttaatc
ccagcacttgggaggcagaggcaggcggatttctgagatcaaagccagcc
tggtctacagagtgagttccaagacagccagggctacacagagaaaccct
gtctcgaaaaaacaaaacaaacaaacaaacaaaacaagcaaacaaacaaa
aaggctcacaaaaaagaaaaacgggaagcagaaacaaagaaaacttggga
aatgttccattttctataccagggtaatgttctttgaaggatttttcatt
gcaaaatctgactaaacttcatcctatcaatgtgctgaattctctcatac
tactactctttcagtttaaattccatttgaaatcagatattcaggaggta
gcagaagagtattttcagaaggaatctctgttatctgaagttggttaaat
gagtctcatacagggaccactagtttgcatgtgtgatgctcattcatggg
aggattatgctctgttattttggggactcctgccatgggagtaattggca
ataaacttgatgtttgcttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_102547392_102548584
seq2: B6Ng01-060H16.b_45_1219 (reverse)

seq1  TTTTCACCTCCCTTAAGATTATAAGATTTCTACTATTTGTATAGTCTAAT  50
      ||||||||| |||||||||||||||||    || |||   |||  || ||
seq2  TTTTCACCT-CCTTAAGATTATAAGAT---CACAATT--GATAAGCT-AT  43

seq1  CACTGAGCATATAATTGTAGAAAGAAAAATAAGCTATCTGTATGTTAATT  100
      |||||||||||||| ||||| |||||||||||||| || |||||||||||
seq2  CACTGAGCATATAA-TGTAG-AAGAAAAATAAGCTTTC-GTATGTTAATT  90

seq1  TGTTTTTTTTTAAAGTGAAAGGAAGATAAAATAGACAGTGAAAAATTACC  150
         ||||||||||||||||| |||||| ||||| ||||||||||||||||
seq2  --GTTTTTTTTAAAGTGAAA-GAAGAT-AAATA-ACAGTGAAAAATTACC  135

seq1  CAGGAATCCAGAAATGTTTTCTGGAAACAATTCTTATTCATGGGCAATTT  200
      || ||||||||||||| |||||| || |||||||||||||||||||||||
seq2  CA-GAATCCAGAAATG-TTTCTGAAACCAATTCTTATTCATGGGCAATTT  183

seq1  CTGTAAGAAAAGGCACTTATAACATGAGAAAAGCCAGCCAATGCTGCTTC  250
      ||||||||||||||||||||||||| | ||||||||||||||||||||||
seq2  CTGTAAGAAAAGGCACTTATAACAT-AAAAAAGCCAGCCAATGCTGCTTC  232

seq1  AAATTAAGTTTGTTTATTCAGTATTTGGTCTACCACATTCTGTACCATTT  300
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGTTTGTTTATTCAGTATTTGGTCTACCACATTCTGTACCATTT  282

seq1  TATCAATAATCTTTGTTTTTAGCATCTATTTTAAGGCAGGTTATATTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATAATCTTTGTTTTTAGCATCTATTTTAAGGCAGGTTATATTTTG  332

seq1  GGGTGTTACATAAGGTATGTGTAAGAGAGAAAGAGAGAGACAGAGACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTTACATAAGGTATGTGTAAGAGAGAAAGAGAGAGACAGAGACAGA  382

seq1  CAGAAAGAGACAGAGACAGAGAGTGGGTCTGAGACACAGAGTGGGTCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGAGACAGAGACAGAGAGTGGGTCTGAGACACAGAGTGGGTCTGG  432

seq1  GGGTACATTGTATATATGTTTTTTATAGAAGAAACATGAGTAAACATAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACATTGTATATATGTTTTTTATAGAAGAAACATGAGTAAACATAAC  482

seq1  AGACAAAAAACGGCTAGAATTTTAGTAGAATTTTAATTCTAGCATCTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAAAACGGCTAGAATTTTAGTAGAATTTTAATTCTAGCATCTGGA  532

seq1  TTCACAACCTAATAGGAGAAAAATTGAAAATTTAAAAAAGAAACCAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAACCTAATAGGAGAAAAATTGAAAATTTAAAAAAGAAACCAGAAA  582

seq1  GCATATTACAGAAAAGTAAGTAATGATTGTACCACAAATAACAAGGAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTACAGAAAAGTAAGTAATGATTGTACCACAAATAACAAGGAATG  632

seq1  AAAGATTTTAACTCCAGAATTGTAAGCTGGCCTAGACCAGATGGCTTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTTTAACTCCAGAATTGTAAGCTGGCCTAGACCAGATGGCTTCCA  682

seq1  GAAGAAGAGCAAGACCTCAAAGGATGTGTAGGACTGAGTAGATAGATGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGAGCAAGACCTCAAAGGATGTGTAGGACTGAGTAGATAGATGAC  732

seq1  TTTGCCTCCGATTTTAGAATAGGGACAGTGTCGTACGTAGGCTTATGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTCCGATTTTAGAATAGGGACAGTGTCGTACGTAGGCTTATGACA  782

seq1  TAAAATTCTGTATAAAGTCAGAGATGATAACCAAAGTCAAAGAGCCAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTCTGTATAAAGTCAGAGATGATAACCAAAGTCAAAGAGCCAGGA  832

seq1  GGAATACCAAAGGAAAAATGAGAGGAAAGAGGAAAGGCAAGTGATAACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATACCAAAGGAAAAATGAGAGGAAAGAGGAAAGGCAAGTGATAACAC  882

seq1  TAAACACAGAAGAGCCTTGAAGGTCAGCTCAAAAGAAGGCATTTTAAATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACACAGAAGAGCCTTGAAGGTCAGCTCAAAAGAAGGCATTTTAAATT  932

seq1  GATTTAGAAGGCAATGAGAAAGCAATGGAGCAAGTGTGGCAGGAATCAGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGAAGGCAATGAGAAAGCAATGGAGCAAGTGTGGCAGGAATCAGG  982

seq1  CAGCTGCTATCAAAGAACCTATCAAAATGTTCGGGCATGATTTGTTCTTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCTATCAAAGAACCTATCAAAATGTTCGGGCATGATTTGTTCTTA  1032

seq1  ATAAAGCTCTGGAATTCTCTACTCCATTGTCCTTGGTCCGGTCACAGATT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGCTCTGGAATTCTCTACTCCATTGTCCTTGGTCCGGTCACAGATT  1082

seq1  TTGTTGGTTGGCAATTTTGCATTAGCTCCCTAATTGCTGATCACTCTCAG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGTTGGCAATTTTGCATTAGCTCCCTAATTGCTGATCACTCTCAG  1132

seq1  AGGATTTTTCTAGACAAACACACACCTGACCAAGGGAGAATTC  1193
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTTTCTAGACAAACACACACCTGACCAAGGGAGAATTC  1175

seq1: chr7_102503368_102504487
seq2: B6Ng01-060H16.g_67_1187

seq1  GAATTCTGAGCCTTCAGGGAGCTGCTGCTGCTGGTGCTGCCCGTTTCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGCCTTCAGGGAGCTGCTGCTGCTGGTGCTGCCCGTTTCCCC  50

seq1  AAGTCTTTTGTTGCAGTCAATTTTTAAAAAAATGAAATGATAGATTTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTTTTGTTGCAGTCAATTTTTAAAAAAATGAAATGATAGATTTCCA  100

seq1  CATTCCTTAACTCATACTACAACCTTGTCCTAGGATTTGGGTATACAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTTAACTCATACTACAACCTTGTCCTAGGATTTGGGTATACAGGG  150

seq1  ATCAATTAGGTCATTTCCTTACTCTAAGCATTTGAACCTCAGAGTGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTAGGTCATTTCCTTACTCTAAGCATTTGAACCTCAGAGTGTTGT  200

seq1  TGAGGTTCCCTCCTGCAGGGATGCACATGCAGTGTGAGAGAGACCATCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTCCCTCCTGCAGGGATGCACATGCAGTGTGAGAGAGACCATCCT  250

seq1  ACAGGGATGCTCATGCAGTGTGAGAGAGACCATGCTACAGGGATGCTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGATGCTCATGCAGTGTGAGAGAGACCATGCTACAGGGATGCTCAT  300

seq1  GCAATGTGGGAGAGCCTCCTGCAGGGATGCTCTCGCAGTGTGGGAGCGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGTGGGAGAGCCTCCTGCAGGGATGCTCTCGCAGTGTGGGAGCGCC  350

seq1  TCCTGCAGGGATGCACATGCAGTGTGTGAGAGGTCATCCTACAGGGATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCAGGGATGCACATGCAGTGTGTGAGAGGTCATCCTACAGGGATGC  400

seq1  TCATGCAGTGTGTGGCAAAGGCCAGGCTGTATGGATTCTGGAGCTGTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCAGTGTGTGGCAAAGGCCAGGCTGTATGGATTCTGGAGCTGTGGG  450

seq1  CCAAGACATCTTGTGAAAGATTAGGAAAGAGCAAAGATGTGGATGGAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGACATCTTGTGAAAGATTAGGAAAGAGCAAAGATGTGGATGGAATG  500

seq1  GGGCTTGGTATGTTCCCAATCCTAACAAAACACTGATCATAGTTCTTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTGGTATGTTCCCAATCCTAACAAAACACTGATCATAGTTCTTTTC  550

seq1  TCTTAAAATACTCACAAAAAGGCCAGCAGTGGTGGCACACTCCTTTAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAATACTCACAAAAAGGCCAGCAGTGGTGGCACACTCCTTTAATC  600

seq1  CCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGATCAAAGCCAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGATCAAAGCCAGCC  650

seq1  TGGTCTACAGAGTGAGTTCCAAGACAGCCAGGGCTACACAGAGAAACCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTACAGAGTGAGTTCCAAGACAGCCAGGGCTACACAGAGAAACCCT  700

seq1  GTCTCGAAAAAACAAAACAAACAAACAAACAAAACAAGCAAACAAACAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCGAAAAAACAAAACAAACAAACAAACAAAACAAGCAAACAAACAAA  750

seq1  AAGGCTCACAAAAAAGAAAAACGGGAAGCAGAAACAAAGAAAACTT-GGA  799
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAGGCTCACAAAAAAGAAAAACGGGAAGCAGAAACAAAGAAAACTTGGGA  800

seq1  AATGTTCCATTTTCTATACCAGGGTAATGTTCTTTGAAGGATTTTTCATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCCATTTTCTATACCAGGGTAATGTTCTTTGAAGGATTTTTCATT  850

seq1  GCAAAATCTGACTAAACTTCATCCTATCAATGTGCTGAATTCTCTCATAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATCTGACTAAACTTCATCCTATCAATGTGCTGAATTCTCTCATAC  900

seq1  TACTACCCTTTCAGTTTAAAATTCCATTTGAAATCAAGATA-TCAGGAGG  948
      |||||| |||||||||| ||||||||||||||||| ||||| ||||||||
seq2  TACTACTCTTTCAGTTT-AAATTCCATTTGAAATC-AGATATTCAGGAGG  948

seq1  TAGCAGAAGAGCA-TTTCAGAA-GAATCTCTGTTATCTG-AGTTGGTTAA  995
      ||||||||||| | |||||||| |||||||||||||||| ||||||||||
seq2  TAGCAGAAGAGTATTTTCAGAAGGAATCTCTGTTATCTGAAGTTGGTTAA  998

seq1  ATGAGTCTCCATACAGGGACCACTAGTTTGCATGTGTGATGCTCATTCAT  1045
      |||||||| |||||||||||||||||||||||||||||||||||||||| 
seq2  ATGAGTCT-CATACAGGGACCACTAGTTTGCATGTGTGATGCTCATTCA-  1046

seq1  TGGGAAGATTATGGCTCTGTTATTTTGGGAACT-CTG-CATGGGAGTTAT  1093
      ||||| |||||| |||||||||||||||| ||| ||| ||||||||| ||
seq2  TGGGAGGATTAT-GCTCTGTTATTTTGGGGACTCCTGCCATGGGAGTAAT  1095

seq1  TTGCATAAAACTTGATGTTTGCCTTGA  1120
      | |||  |||||||||||||| |||||
seq2  TGGCAATAAACTTGATGTTTG-CTTGA  1121