BAC Information

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BAC

Clone NameB6Ng01-060O15
Chromosome7 (Build37)7 (Build37)
Map Location 27,811,437 - 27,812,39227,571,326 - 27,572,189
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG667957, Cyp2b13, EG668047, LOC623532, Cyp2b9, LOC667968, Cyp2a4, Nlrp9c, LOC100043195, Nlrp4a, Nlrp9a, V1re12, EG243881, LOC623830, Cyp2b19, Cyp2g1, LOC100043745, Cyp2a5, EG233005, EG330491
Downstream geneCyp2a12, LOC100043199, Cyp2f2, Gm1450, Egln2, Rab4b, Mia1, Snrpa, Itpkc, Adck4, Numbl, Ltbp4, Shkbp1, Spnb4, Blvrb, EG668045, Sertad3, Sertad1, Prx, Hipk4, Pld3, 2310022A10Rik, Akt2, Ttc9b, Map3k10, C030039L03Rik, Zfp60, LOC100043229, LOC100043233, 4933426I21Rik, Zfp59, 4732475C15Rik, Prkcz2, 1700049G17Rik, EG668175, LOC100043771, Zfp780b, C130069I09Rik, LOC100043772
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060O15.bB6Ng01-060O15.g
ACCDH881749DH881750
length1,0771,070
definitionDH881749|Mus musculus domesticus DNA, BAC clone: B6Ng01-060O15, 5' end.DH881750|Mus musculus domesticus DNA, BAC clone: B6Ng01-060O15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(27,811,437 - 27,812,392)(27,571,326 - 27,572,189)
sequence
gaattctttattgtttctacttccatttttagatcctggatggttttgtt
caattccatcacctgtttggttgtgttttcctataattctttaagtgttt
tttgtgttttctctttaagcgcttctcctgtttagctgtgttctcctgta
tttctttaagggagttattaatgtccttcttaaaatcctctaccagcatc
acgagatatgatttaaaatccaaatcttgcttttccagtgtgttagggtt
tccaggactcgctgtggtgggagtactgggttctgatgatgccaagtagt
cttgggttctgttggtaaggttcttgcatttcccttttgccatttggtaa
tctctggtgttagatattcttgctgtgtctgcctggagcttgttcctcct
gtgagtgtgtaagcctgtgtcagcactcctgggagactgactctctcata
gcaagaccagtgcacaaagggctgcagaacagccccacctcctggctgca
gatgtaggcccataagacctgtcccagctgctctgctgcttctgcagcct
gtgcatttctgaatggacccgccttagagaggcaccagagagaaaatgga
gacctcccctgagtcccagggtcagagtgctcccgttagtgcacttaacc
actgagccaaatatgcttatctaatcttactacctcctctgagcccagtg
acaagtacttgccaaatttctataagagacaccaagagctctccacagtg
gtgtagttctgaatggaccaactatcaaaggtgtcccagcaacccacagt
gagccctttctaggatcaagtggaagtcaatctcaactcatatctgatac
ttgcatacaaagctgctaggaccaccctcaggaaccatgtggtgccacac
cctcaggccccacctggtgccacccttatactttaatgaaagcactgcca
gcccttcagcacagaagtagaaaactaagtttaactcatcaatacaactt
cttgctaatataggtctacttatgtgctgatttcccggccattggatata
aactggccaggatctctctggcacttc
gaattcagtaggaattcagtgagaaggttacctattcagtaacattcaaa
tttacttctagtagagagagtgaaactaattaggcattacaaagaactga
gccagaatagctcagggctagtctgcagagtgattacttaggacagtagc
cagtctcacccaaacacaatggcctagctaataggtgggtttaccatgta
agagttagggaatcccactgagacaggaatcttcactacagccaggtata
gcaagctacattgcatattacaagaatttatcaaggcccaggaaataggg
ggttgtggtattgcattgttcatgagaaggtctgctagagcagaaccccc
tggtgctagctttcacaggctcaaaggagtagcacaaattgtgactaggg
tgtcaaatccttagctgtcattaagctgaccctaggcagggctgttttat
cttactgtaaatattacctggttcctataagtccctttgaagtcattcct
ttgttttgtgtcaggtaacttcaatgtactttgcctgctgtgacatccta
ccccctttattttctgtattatataagactggtgttcactttgtgacaat
acattcagattctgcacaatcttgcgtgttgatctgtctgtcatttgcgg
accccttgcccatctgtacccagagacctgtcctacacagacaagggacc
caagagggtctgcagcacagacttcctggtattccagcactgtctttcca
tcaggatgattctcaagaggaaaggccattaaaatttctcttgtagggag
gtatctctgtctcatagataatttcttctaaattgaaacattctctcctg
ggagggaagaggcagattcacaaaatccatgaagtaaatgaaaacgtact
gtatctgttgagatttggtcttttgctatgtattgtaatttaaatactgg
cctccaaggctgggttttctcaggatgagagaatcacagaagacatattt
atcttgcccttaagtatctctgatggtaaataaaatgctaccgctatagc
tagcagaaagaaataggtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_27811437_27812392
seq2: B6Ng01-060O15.b_182_1123

seq1  CTGTATTCTCCTGTATTTCTTTAAGGGAGTTATTAATGTCCTTCTTAAAA  50
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTCTCCTGTATTTCTTTAAGGGAGTTATTAATGTCCTTCTTAAAA  50

seq1  TCCTCTACCAGCATCATGAGATATGATTTTAAATTCAAATCTTGCTTGTC  100
      |||||||||||||||| |||||||||||| |||| |||||||||||| ||
seq2  TCCTCTACCAGCATCACGAGATATGATTTAAAATCCAAATCTTGCTTTTC  100

seq1  CAGTGTATT-GGGGTTACAGGATTCGCTGTGTTGGGAGTACTGGGTTCTG  149
      |||||| || ||| || ||||| |||||||| ||||||||||||||||||
seq2  CAGTGTGTTAGGGTTTCCAGGACTCGCTGTGGTGGGAGTACTGGGTTCTG  150

seq1  ATGATGCCAAGTAGTCTTGGGTTCTGTTGGTAAGATTCTTGCATTTGCCT  199
      |||||||||||||||||||||||||||||||||| ||||||||||| |||
seq2  ATGATGCCAAGTAGTCTTGGGTTCTGTTGGTAAGGTTCTTGCATTTCCCT  200

seq1  TTTGCCATCTAGTAATCTCTGGTGTTAGATATTCTTGCTGTATCTGGCTG  249
      |||||||| | |||||||||||||||||||||||||||||| |||| |||
seq2  TTTGCCATTTGGTAATCTCTGGTGTTAGATATTCTTGCTGTGTCTGCCTG  250

seq1  GAGCTTGTTCCTCCTGTGAGTCTGTAAGCCTGTGTCAGCACTCCTGGGAG  299
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAGCTTGTTCCTCCTGTGAGTGTGTAAGCCTGTGTCAGCACTCCTGGGAG  300

seq1  ACTGACTCTCTCATAGCAAGACCAGTGCACAGAGGGCTGCAGAACAGCCC  349
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACTGACTCTCTCATAGCAAGACCAGTGCACAAAGGGCTGCAGAACAGCCC  350

seq1  CACCTCCTGGCTGCAGATGTAGGCCCATAAGACCTGTCCCAGCTGCTCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCTGGCTGCAGATGTAGGCCCATAAGACCTGTCCCAGCTGCTCTG  400

seq1  CTGCTTCTGCAGCCTGTGCACCTCTGAATGGACCTGCCTTAGAGAGGTAC  449
      ||||||||||||||||||||  |||||||||||| |||||||||||| ||
seq2  CTGCTTCTGCAGCCTGTGCATTTCTGAATGGACCCGCCTTAGAGAGGCAC  450

seq1  CAGAGAGATAATGGAGATCTCCCCTGAGTCCTGGGGTCAGAGTGCTCCAG  499
      |||||||| |||||||| |||||||||||||  ||||||||||||||| |
seq2  CAGAGAGAAAATGGAGACCTCCCCTGAGTCCCAGGGTCAGAGTGCTCCCG  500

seq1  TTAGTGCACTTAACCACTGAGCCAAATATGCTTATCTAATCTTACTACCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGCACTTAACCACTGAGCCAAATATGCTTATCTAATCTTACTACCT  550

seq1  CCTCTGAGCCAAGTGACAAGTTCTTGCCAAATTTCTATAAGAGACACCAA  599
      |||||||||| |||||||||| ||||||||||||||||||||||||||||
seq2  CCTCTGAGCCCAGTGACAAGTACTTGCCAAATTTCTATAAGAGACACCAA  600

seq1  GAGCTCTCCACAGTGGTGTAGCTCTGAATGGACCAATTATCAAAGATTTC  649
      ||||||||||||||||||||| |||||||||||||| |||||||| | ||
seq2  GAGCTCTCCACAGTGGTGTAGTTCTGAATGGACCAACTATCAAAGGTGTC  650

seq1  CCAGTAACCCACAGTGAGCCCTTTCTAGGATCAAGTGGAAGTCAATCTCA  699
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAACCCACAGTGAGCCCTTTCTAGGATCAAGTGGAAGTCAATCTCA  700

seq1  ACGTGTATCTGATGCTTGCATACAAAGCTGCTAGGACCATTCTCAGGAAC  749
      ||   |||||||| |||||||||||||||||||||||||  |||||||||
seq2  ACTCATATCTGATACTTGCATACAAAGCTGCTAGGACCACCCTCAGGAAC  750

seq1  CACGTGATGCCACACCCTCAGGCCCCACCTGGTGCCACCCTTATACTTTA  799
      || ||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGTGCCACACCCTCAGGCCCCACCTGGTGCCACCCTTATACTTTA  800

seq1  ATGAAAGCAACTGCCAAGCCCCTTCAGCACCAGAAGTAGAAAACTAAATT  849
      |||||||| |||||||   |||||||||| ||||||||||||||||| ||
seq2  ATGAAAGC-ACTGCCA--GCCCTTCAGCA-CAGAAGTAGAAAACTAAGTT  846

seq1  GTACTCATTCAATACCAACTTCTTTCCTACTATAGTGTCTACCTATGTCG  899
        ||||| |||||| ||||||| || ||| ||||| |||||| ||||| |
seq2  TAACTCA-TCAATA-CAACTTC-TTGCTAATATAG-GTCTACTTATGT-G  891

seq1  CTGATTTCCTGAGTCTATCTGATATCATAACT-GCCAGTGGATCTCTCTG  948
      |||||||||   | | ||  |||||   |||| ||||  |||||||||||
seq2  CTGATTTCC--CGGCCATTGGATAT--AAACTGGCCA--GGATCTCTCTG  935

seq1  CCCACTTC  956
        ||||||
seq2  -GCACTTC  942

seq1: chr7_27571326_27572189
seq2: B6Ng01-060O15.g_288_1137

seq1  AGACAGGAATCTTCACTACAGCCAGGTATAGCAAGCTACATTGCATATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGAATCTTCACTACAGCCAGGTATAGCAAGCTACATTGCATATTA  50

seq1  CAAGAATTTATCAAGGCCCAGGAAATAGGGGGTTGTGGTATTGCATTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATTTATCAAGGCCCAGGAAATAGGGGGTTGTGGTATTGCATTGTT  100

seq1  CATGAGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGAAGGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAGGC  150

seq1  TCAAAGGAGTAGCACAAATTGTGACTAGGGTGTCAAATCCTTAGCTGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGAGTAGCACAAATTGTGACTAGGGTGTCAAATCCTTAGCTGTCA  200

seq1  TTAAGCTGACCCTAGGCAGGGCTGTTTTATCTTACTGTAAATATTACCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCTGACCCTAGGCAGGGCTGTTTTATCTTACTGTAAATATTACCTG  250

seq1  GTTCCTATAAGTCCCTTTGAAGTCATTCCTTTGTTTTGTGTCAGGTAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTATAAGTCCCTTTGAAGTCATTCCTTTGTTTTGTGTCAGGTAACT  300

seq1  TCAATGTACTTTGCCTGCTGTGACATCCTACCCCCTTTATTTTCTGTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTACTTTGCCTGCTGTGACATCCTACCCCCTTTATTTTCTGTATT  350

seq1  ATATAAGACTGGTGTTCACTTTGTGACAATACATTCAGATTCTGCACAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGACTGGTGTTCACTTTGTGACAATACATTCAGATTCTGCACAAT  400

seq1  CTTGCGTGTTGATCTGTCTGTCATTTGCGGACCCCTTGCCCATCTGTACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCGTGTTGATCTGTCTGTCATTTGCGGACCCCTTGCCCATCTGTACC  450

seq1  CAGAGACCTGTCCTACACAGACAAGGGACCCAAGAGGGTCTGCAGCACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACCTGTCCTACACAGACAAGGGACCCAAGAGGGTCTGCAGCACAG  500

seq1  ACTTCCTGGTATTCCAGCACTGTCTTTCCATCAGGATGATTCTCAAGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTGGTATTCCAGCACTGTCTTTCCATCAGGATGATTCTCAAGAGG  550

seq1  AAAGGCCATTAAAATTTCTCTTGTAGGGAGGTATCTCTGTCTCATAGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCCATTAAAATTTCTCTTGTAGGGAGGTATCTCTGTCTCATAGATA  600

seq1  ATTTCTTCTAAATTGAAACATTCTCTCCT-GGAGGGAAGAGGCAGATTCA  649
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATTTCTTCTAAATTGAAACATTCTCTCCTGGGAGGGAAGAGGCAGATTCA  650

seq1  CAAAATCCATGAAGTAAATGAAAACGTACTGTATCTGTTGAGATTTGGTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCCATGAAGTAAATGAAAACGTACTGTATCTGTTGAGATTTGGTC  700

seq1  TTTTGCTATGTATTGTAATTTTAAATACTGGCCCCCAAGGCTGGGTTTTC  749
      |||||||||||||||||| |||||||||||||| ||||||||||||||| 
seq2  TTTTGCTATGTATTGTAA-TTTAAATACTGGCCTCCAAGGCTGGGTTTT-  748

seq1  CTCAAGGATGAGAGAATCCACAGGAAGACAATATGTAATCTTGCCCCTCA  799
      ||| ||||||||||||| |||| |||||| |||| | |||||| |||| |
seq2  CTC-AGGATGAGAGAAT-CACA-GAAGAC-ATAT-TTATCTTG-CCCTTA  792

seq1  AGTTATCCCTGATTGGTAAATAAAGATGCCTACAGCCTATAGCTAGGCAG  849
      || |||| |||| ||||||||||| ||| |||| | ||||||||| ||||
seq2  AG-TATCTCTGA-TGGTAAATAAA-ATG-CTACCG-CTATAGCTA-GCAG  836

seq1  AAGAGAAATAGGTAG  864
      || ||||||||||||
seq2  AA-AGAAATAGGTAG  850