BAC Information

Click to search

BAC

Clone NameB6Ng01-061H06
Chromosome7 (Build37)
Map Location 124,319,276 - 124,480,449
singlet/doubletdoublet
Overlap genenone
Upstream genePlekha7, Rps13, Pik3c2a, LOC100042798, Nucb2, LOC100043320, EG668484, LOC668485, LOC546993, LOC100043330
Downstream geneXylt1, LOC669758, Rps15a, Arl6ip1, 2610207I05Rik, LOC100043339
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061H06.bB6Ng01-061H06.g
ACCDH882126DH882127
length1,1281,057
definitionDH882126|Mus musculus domesticus DNA, BAC clone: B6Ng01-061H06, 5' end.DH882127|Mus musculus domesticus DNA, BAC clone: B6Ng01-061H06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(124,319,276 - 124,320,420)(124,479,398 - 124,480,449)
sequence
gaattcaattctggtgtccagagggtgatatcctggtgtcctgatatttg
aaacttcccttgaagcatctgtctctgttaggttttccagtccctatgac
ctcttgacatcccctttcatctctgaatcttgacagtgatttctagaaga
acaagccatggatctctaaggagaagaaatctaggagaaaaaatgtgcct
gcgagagtggattctgcacacgtgtctccatgaactaactgcttaccagc
agaagtgagaagtcaggcttttcctggtatctgattttctggtgccacag
gaaagaccaaatgcataattctacagggacctaagaaatctttgtccctt
tcataagggtggacctgctcatgtccccatttctgcctgaagttgcagct
gcagggacctacatggtgtttgcccctttaataagattgaacctgctccg
gtcaccttcccttcctatactgatgacttatgctccatgtctccactaga
gtttttggtctccaagttcagactttgtgtgccacagaaaccaacttctg
ctactaggagagatgtccacaggttttaagggtgtgcctagaaaagtcgt
aacctacaagaccaggtgtggtggtttgaatatgcttggccccggggagt
ggcactctttggacttgtggccttgttagaggatgtatgtcattgtgggt
gtgggctttgagagctttctcccagcttcctgaggatgacagtgtttttc
ctgtttgccttccgaacaagatgtagaactctcagttccttctccagcac
catggctgcatgggtgctgccatgttcccaccttgatgatacaggactga
acgtctgaacttgaaagccagccccaattaaatgttgtcctataaaagtt
accttggtcatggtgtctgtgcacagcataaaaccctgactagacaccag
gcttagggattagagtcgttattatgatccatagaaagaaaacccactag
tgttttgttttgctttgttttgattaaaacaaaaacaaaaatccctgctc
agatcccatgttggagttattggaaacagatgtcttgctgcagcattgct
atgggttacagaacaatttcagggtcct
gaattctccttcgcctaggacgtgtcactccctgattggctgcagcccat
cggccgagttgacgtcacggggaaggcagagcacatggagtgaagaacca
ccctcggcacatgcgcagattatttgtttaccacttagaacacagctgtc
agcgccatcttgtaacggcgaatgtgggcgcggctcccaacaaggtttag
cacactgagctgtttgattttggtaaatagacgaaaaaccaaactgaccc
ggaggtgcacacagaataggagaacaggtacagaatacttctaggggaca
ctgcagtgtatcccagcctctcactgaactttcactctggtccacagtca
cctttcgctatagaagctgggttccagctctccctgcctcccttgtagtt
agactaaaaatctcatctctagacatcattttggaagctggtactggtca
tagtggaagtaatttttgcacagcttcaagggtagcaagaaaggaacaga
tgtcctaggagagtgttcaggcctgggcatcacaaggttttgaagtccac
cgcagggaaagtcgtcgtctctcctattcacctcctcgtgaatcgtcctt
gatgtcgactcaaaagctgcaccagtttctattgctgttgcaagaaatga
ccacacgctgcatggcttgtggcaatcatggttctctcactgttctgggg
tttggagatgaacatcatggtgtcaggaaggctgctgtccctgtgatgtt
tttaagagagaaacttctttgttttttgttttgttttgttttgttttgtt
ttgttttactagcttctggtggccactagtaatcctttgatttggtgtct
cattccatctctgcctctgtattcctatggtcttctatatgatatagtaa
taattcatctctctcatctcttactttgttgtgaccaggatgtcactgta
cagtgtatactaatataggctgttcctcaactctgggtcttcctgtctca
tactcttttaatatttaaatgtttaatatcttatcaaatcatatcatcta
tccagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_124319276_124320420
seq2: B6Ng01-061H06.b_45_1172

seq1  GAATTCAATTCTGGTGTCCAGAGGGTGATATCCTGGTGTCCTGATATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTCTGGTGTCCAGAGGGTGATATCCTGGTGTCCTGATATTTG  50

seq1  AAACTTCCCTTGAAGCATCTGTCTCTGTTAGGTTTTCCAGTCCCTATGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCCCTTGAAGCATCTGTCTCTGTTAGGTTTTCCAGTCCCTATGAC  100

seq1  CTCTTGACATCCCCTTTCATCTCTGAATCTTGACAGTGATTTCTAGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGACATCCCCTTTCATCTCTGAATCTTGACAGTGATTTCTAGAAGA  150

seq1  ACAAGCCATGGATCTCTAAGGAGAAGAAATCTAGGAGAAAAAATGTGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCCATGGATCTCTAAGGAGAAGAAATCTAGGAGAAAAAATGTGCCT  200

seq1  GCGAGAGTGGATTCTGCACACGTGTCTCCATGAACTAACTGCTTACCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGAGTGGATTCTGCACACGTGTCTCCATGAACTAACTGCTTACCAGC  250

seq1  AGAAGTGAGAAGTCAGGCTTTTCCTGGTATCTGATTTTCTGGTGCCACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGAGAAGTCAGGCTTTTCCTGGTATCTGATTTTCTGGTGCCACAG  300

seq1  GAAAGACCAAATGCATAATTCTACAGGGACCTAAGAAATCTTTGTCCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGACCAAATGCATAATTCTACAGGGACCTAAGAAATCTTTGTCCCTT  350

seq1  TCATAAGGGTGGACCTGCTCATGTCCCCATTTCTGCCTGAAGTTGCAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGGGTGGACCTGCTCATGTCCCCATTTCTGCCTGAAGTTGCAGCT  400

seq1  GCAGGGACCTACATGGTGTTTGCCCCTTTAATAAGATTGAACCTGCTCCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGACCTACATGGTGTTTGCCCCTTTAATAAGATTGAACCTGCTCCG  450

seq1  GTCACCTTCCCTTCCTATACTGATGACTTATGCTCCATGTCTCCACTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTTCCCTTCCTATACTGATGACTTATGCTCCATGTCTCCACTAGA  500

seq1  GTTTTTGGTCTCCAAGTTCAGACTTTGTGTGCCACAGAAACCAACTTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGGTCTCCAAGTTCAGACTTTGTGTGCCACAGAAACCAACTTCTG  550

seq1  CTACTAGGAGAGATGTCCACAGGTTTTAAGGGTGTGCCTAGAAAAGTCGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAGGAGAGATGTCCACAGGTTTTAAGGGTGTGCCTAGAAAAGTCGT  600

seq1  AACCTACAAGACCAGGTGTGGTGGTTTGAATATGCTTGGCCCCGGGGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTACAAGACCAGGTGTGGTGGTTTGAATATGCTTGGCCCCGGGGAGT  650

seq1  GGCACTCTTTGGACTTGTGGCCTTGTTAGAGGATGTATGTCATTGTGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTCTTTGGACTTGTGGCCTTGTTAGAGGATGTATGTCATTGTGGGT  700

seq1  GTGGGCTTTGAGAGCTTTCTCCCAGCTTCCTGAGGATGACAGTGTTTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCTTTGAGAGCTTTCTCCCAGCTTCCTGAGGATGACAGTGTTTTTC  750

seq1  CTGTTTGCCTTCCGAACAAGATGTAGAACTCTCAGTTCCTTCTCCAGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGCCTTCCGAACAAGATGTAGAACTCTCAGTTCCTTCTCCAGCAC  800

seq1  CATGGCTGCATGGGTGCTGCCATGTTCCCACCTTGATGATACAGGACTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTGCATGGGTGCTGCCATGTTCCCACCTTGATGATACAGGACTGA  850

seq1  ACGTCTGAACTTGAAAGCCAGCCCCAATTAAATGTTGTCCTATAAAAGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCTGAACTTGAAAGCCAGCCCCAATTAAATGTTGTCCTATAAAAGTT  900

seq1  ACCTTGGTCATGGTGTCTGTGCACAGCAATAAAACCCTGACTAAGACACC  950
      ||||||||||||||||||||||||||| |||||||||||||| |||||||
seq2  ACCTTGGTCATGGTGTCTGTGCACAGC-ATAAAACCCTGACT-AGACACC  948

seq1  AGGCTTAGGGATTAGAGTCGTTTATTATGAATCCCATAGAAAGAAAAACC  1000
      |||||||||||||||||||| |||||||||   ||||||||||||||  |
seq2  AGGCTTAGGGATTAGAGTCG-TTATTATGA--TCCATAGAAAGAAAA--C  993

seq1  CAACTAGTGTTTTGTTTTGCTTTGTTTTGATTAAAAACAAAAAACAAAAA  1050
      | |||||||||||||||||||||||||||||| |||||||||   | |||
seq2  CCACTAGTGTTTTGTTTTGCTTTGTTTTGATT-AAAACAAAA---ACAAA  1039

seq1  AACCCCTGCTCAGAACCCCATGTTGGAGTTTATAGGGAAACAGATTGCCT  1100
      || |||||||||| | ||||||||||||||  |  ||||||||||  | |
seq2  AATCCCTGCTCAG-ATCCCATGTTGGAGTTATT--GGAAACAGATGTCTT  1086

seq1  GCTGCAGCCATGGCTATGGGGTACACAGCACATTTTCAGGGTCCT  1145
      ||||||| ||| |||||||| |  |||| ||| ||||||||||||
seq2  GCTGCAG-CATTGCTATGGGTT--ACAGAACAATTTCAGGGTCCT  1128

seq1: chr7_124479398_124480449
seq2: B6Ng01-061H06.g_69_1124 (reverse)

seq1  ACTGGATAGATGATA-GATTTGAT-AGATATAAAACATTTAAATA-TAAA  47
      ||||||||||||||| |||||||| |||||| ||||||||||||| ||||
seq2  ACTGGATAGATGATATGATTTGATAAGATATTAAACATTTAAATATTAAA  50

seq1  AGGGTATGAGACAGGAGGA-CCAGGTTTGAGG-ACAGCCTATATTAGTAT  95
      || ||||||||||||| || ||||  |||||| |||||||||||||||||
seq2  AGAGTATGAGACAGGAAGACCCAGAGTTGAGGAACAGCCTATATTAGTAT  100

seq1  ACACTGTACAGTGACATCCTGTCAACAACAAAGTAAAGAGATGAGAGAGA  145
      |||||||||||||||||||||   |||||||||| |||||||||||||||
seq2  ACACTGTACAGTGACATCCTGGTCACAACAAAGT-AAGAGATGAGAGAGA  149

seq1  TGAATTATTACTATATCATAATAGAAGACCATAGGAATACAGAGGCAGAG  195
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGAATTATTACTATATCAT-ATAGAAGACCATAGGAATACAGAGGCAGAG  198

seq1  ATGGAATGAGACAACAAATC-AAGGATTACTAGTGGCCACCAGAAGCTAG  244
      ||||||||||||| |||||| |||||||||||||||||||||||||||||
seq2  ATGGAATGAGACACCAAATCAAAGGATTACTAGTGGCCACCAGAAGCTAG  248

seq1  TAAAACAAAACAAAACAAAACAAAACAAAACAAAAAAACAAAGAAGTTTC  294
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TAAAACAAAACAAAACAAAACAAAACAAAAC-AAAAAACAAAGAAGTTTC  297

seq1  TCTCTT-AAAACATCACAGGGACAGCAGCCTTCCTGACACCATGATGTTC  343
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTAAAAACATCACAGGGACAGCAGCCTTCCTGACACCATGATGTTC  347

seq1  ATCTCCAAACCCCAGAACAGTGAGAGAACCATGATTGCCACAAGCCATGC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCAAACCCCAGAACAGTGAGAGAACCATGATTGCCACAAGCCATGC  397

seq1  AGCGTGTGGTCATTTCTTGCAACAGCAATAGAAACTGGTGCAGCTTTTGA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGTGGTCATTTCTTGCAACAGCAATAGAAACTGGTGCAGCTTTTGA  447

seq1  GTCGACATCAAGGACGATTCACGAGGAGGTGAATAGGAGAGACGACGACT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGACATCAAGGACGATTCACGAGGAGGTGAATAGGAGAGACGACGACT  497

seq1  TTCCCTGCGGTGGACTTCAAAACCTTGTGATGCCCAGGCCTGAACACTCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGCGGTGGACTTCAAAACCTTGTGATGCCCAGGCCTGAACACTCT  547

seq1  CCTAGGACATCTGTTCCTTTCTTGCTACCCTTGAAGCTGTGCAAAAATTA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGACATCTGTTCCTTTCTTGCTACCCTTGAAGCTGTGCAAAAATTA  597

seq1  CTTCCACTATGACCAGTACCAGCTTCCAAAATGATGTCTAGAGATGAGAT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCACTATGACCAGTACCAGCTTCCAAAATGATGTCTAGAGATGAGAT  647

seq1  TTTTAGTCTAACTACAAGGGAGGCAGGGAGAGCTGGAACCCAGCTTCTAT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTCTAACTACAAGGGAGGCAGGGAGAGCTGGAACCCAGCTTCTAT  697

seq1  AGCGAAAGGTGACTGTGGACCAGAGTGAAAGTTCAGTGAGAGGCTGGGAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAAAGGTGACTGTGGACCAGAGTGAAAGTTCAGTGAGAGGCTGGGAT  747

seq1  ACACTGCAGTGTCCCCTAGAAGTATTCTGTACCTGTTCTCCTATTCTGTG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGCAGTGTCCCCTAGAAGTATTCTGTACCTGTTCTCCTATTCTGTG  797

seq1  TGCACCTCCGGGTCAGTTTGGTTTTTCGTCTATTTACCAAAATCAAACAG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCTCCGGGTCAGTTTGGTTTTTCGTCTATTTACCAAAATCAAACAG  847

seq1  CTCAGTGTGCTAAACCTTGTTGGGAGCCGCGCCCACATTCGCCGTTACAA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGTGCTAAACCTTGTTGGGAGCCGCGCCCACATTCGCCGTTACAA  897

seq1  GATGGCGCTGACAGCTGTGTTCTAAGTGGTAAACAAATAATCTGCGCATG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCGCTGACAGCTGTGTTCTAAGTGGTAAACAAATAATCTGCGCATG  947

seq1  TGCCGAGGGTGGTTCTTCACTCCATGTGCTCTGCCTTCCCCGTGACGTCA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGAGGGTGGTTCTTCACTCCATGTGCTCTGCCTTCCCCGTGACGTCA  997

seq1  ACTCGGCCGATGGGCTGCAGCCAATCAGGGAGTGACACGTCCTAGGCGAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGGCCGATGGGCTGCAGCCAATCAGGGAGTGACACGTCCTAGGCGAA  1047

seq1  GGAGAATTC  1052
      |||||||||
seq2  GGAGAATTC  1056