BAC Information

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BAC

Clone NameB6Ng01-063C16
Chromosome7 (Build37)
Map Location 130,018,665 - 130,129,222
singlet/doubletdoublet
Overlap gene4930413G21Rik, Rbbp6
Upstream geneScnn1b, Cog7, Gga2, Ears2, Ubfd1, Ndufab1, Palb2, Dctn5, Plk1, Ern2, 2010110P09Rik, Prkcb1, LOC668486, Cacng3
Downstream geneLOC628696, LOC100042977, LOC100042981, Tnrc6a, Slc5a11, Arhgap17, Lcmt1, Aqp8, Zkscan2, LOC100043482, EG628779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063C16.bB6Ng01-063C16.g
ACCDH883344DH883345
length9521,056
definitionDH883344|Mus musculus domesticus DNA, BAC clone: B6Ng01-063C16, 5' end.DH883345|Mus musculus domesticus DNA, BAC clone: B6Ng01-063C16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(130,018,665 - 130,019,348)(130,128,145 - 130,129,222)
sequence
gaattctacactgggcagagcttgaacataagaaacctcaaagcccaccc
ccacagtgacacacttcctccaacaaggccacacctcttaataatgtcac
ttcctgtgggccaagcattcaaacacatcagtctattcaaaccctattca
aacatatggcaaactaatagaaatgcactactttgtaagctgtcttaatt
gttctattgctataagagcaccatgaccaaggcaaacttcttgaagaaaa
caagtggggacttgcttacagtttcagaggtttagtctattatcatcaca
gcaaagagatggcagcatgcaggcaggcatggtgctggagatgtatctga
gagctttacatcttgatccactatcagtgagcagagagagagagagagag
agagagagagagagagagagactgggcctggtgtgggctgttgaaacctc
ctcaaagcatacccctgtgacatcccgcctccaacaacacctcctactcc
ttcccagacagttctactaactggagaccaaaaattcaaatacatgagtc
catggggccattctcatttcaaacccatcacataaactaacttaaaatat
acttttattaaaaatgagtttgaacacagattttgctgcctgtgtgaaaa
atgtttccccctaagaagatataaatttattaaatgaaaatctcagtgcc
aggtgtggcatactttctctatttcttgttaattaggggctttcagaagc
ccccataataacacaggctacttccatttgctcttgggttcccaccctaa
ctaaatggttagactttattactgaagacacaacacagtttggttacagg
acacagaaaaatcaagccggactgacctgaaaacttcgttttgcagcagc
atcattgctagaaaatgcatgtaaaccatggaggggagaagggggccaat
gg
gaattccagtgctctttttgatcctaggaccagattcaaagttcttatcc
tatttggaggaagcaagaggaaaggaggacagaacagtctttagtcatgt
ctgccaacagctcatacagcgcttctcactgagttttacttgtgatgcct
ccccacagaaactcagttatttcccagcaactgccatgtgagctaagtac
tcatcagctctctttcagagaaaacaagacttagggacaaggaacatgct
ctactcaacaagacagccaaggcttggtcctggcaacctagactccagaa
gttgtgctcatctaccatcttaatggaagagagtttcaccatggtaaata
tagttaaataattctaagaaaaactagatgtatgtatcagtttctacatg
gaacttaccccatttgttgggcaattcttaatataatgaccaggtttacc
acaacgaaagcaggtgtaagatggaggtggtggacctactagagttttct
tcatgtaactgaaaaggaaaaagaattcatatgtactctattagagactt
aggaaaaataatgcttctgattgcgggggcaaacacaccccaaagttcct
agagcataacagtattcatgaacttacttgattgggtcgtattcatggcc
agactgtgacatcattgctttaattttgtcttcttcagaagcattggctt
cagccagattggcagtctgtttaacaggtaattatttgacacacacatta
gaaacacattaagaccacacagcaaagacaacacacgcattctacacaga
gcagcttctaaacgagctgtgcttaacaacagtaagtactgggcattctt
ccatcactctatgctgtctaggggagcttgggaggctgcagagtcttctg
gggattcaaacctaagaccttgtctgtacttacataaaggcaggcgagat
taaaagaaacacatgttaattttaaagatttcattgtcacagcactggat
tatattaatttagacttggatgaggtggggtaatgacttacggtactatc
actaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_130018665_130019348
seq2: B6Ng01-063C16.b_42_728

seq1  GAATTCTACACTGGGCAGAGCTTGAACATAAGAAACCTCAAAGCCCACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACACTGGGCAGAGCTTGAACATAAGAAACCTCAAAGCCCACCC  50

seq1  CCACAGTGACACACTTCCTCCAACAAGGCCACACCTCTTAATAATGTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTGACACACTTCCTCCAACAAGGCCACACCTCTTAATAATGTCAC  100

seq1  TTCCTGTGGGCCAAGCATTCAAACACATCAGTCTATTCAAACCCTATTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTGGGCCAAGCATTCAAACACATCAGTCTATTCAAACCCTATTCA  150

seq1  AACATATGGCAAACTAATAGAAATGCACTACTTTGTAAGCTGTCTTAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATGGCAAACTAATAGAAATGCACTACTTTGTAAGCTGTCTTAATT  200

seq1  GTTCTATTGCTATAAGAGCACCATGACCAAGGCAAACTTCTTGAAGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATTGCTATAAGAGCACCATGACCAAGGCAAACTTCTTGAAGAAAA  250

seq1  CAAGTGGGGACTTGCTTACAGTTTCAGAGGTTTAGTCTATTATCATCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGGGACTTGCTTACAGTTTCAGAGGTTTAGTCTATTATCATCACA  300

seq1  GCAAAGAGATGGCAGCATGCAGGCAGGCATGGTGCTGGAGATGTATCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGAGATGGCAGCATGCAGGCAGGCATGGTGCTGGAGATGTATCTGA  350

seq1  GAGCTTTACATCTTGATCCACTATCAGTGAGCAGAGAGAGAGAGAGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTTACATCTTGATCCACTATCAGTGAGCAGAGAGAGAGAGAGAGAG  400

seq1  AGAGAGAGAGAGAGAGAGAGACTGGGCCTGGTGTGGGCTGTTGAAACCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGACTGGGCCTGGTGTGGGCTGTTGAAACCTC  450

seq1  CTCAAAGCATACCCCTGTGACATCCCGCCTCCAACAACACCTCCTACTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGCATACCCCTGTGACATCCCGCCTCCAACAACACCTCCTACTCC  500

seq1  TTCCCAGACAGTTCTACTAACTGGAGACCAAAAATTCAAATACATGAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGACAGTTCTACTAACTGGAGACCAAAAATTCAAATACATGAGTC  550

seq1  CATGGGGCCATTCTCA-TTCAAACCCATCACATAAACTAACTTAAAATAT  599
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CATGGGGCCATTCTCATTTCAAACCCATCACATAAACTAACTTAAAATAT  600

seq1  ACTTTTATTAAAAATGAGTTTGAACACAGA-TTTGCTGCCTGTGTGAAAA  648
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ACTTTTATTAAAAATGAGTTTGAACACAGATTTTGCTGCCTGTGTGAAAA  650

seq1  ATGTTTCCCCCTAAGAAGATATAAA-TTATTAAATGA  684
      ||||||||||||||||||||||||| |||||||||||
seq2  ATGTTTCCCCCTAAGAAGATATAAATTTATTAAATGA  687

seq1: chr7_130128145_130129222
seq2: B6Ng01-063C16.g_69_1124 (reverse)

seq1  TGTAGTGTATAGTAACGTTAAGTCATTTACCCCACCCTACATTCCAAGTT  50
      ||||||| |||||| || ||||||| ||||||||||  |   |||||| |
seq2  TGTAGTG-ATAGTACCG-TAAGTCA-TTACCCCACCTCA---TCCAAG-T  43

seq1  CTAAATGTAAATTATAATCTCAGTGCTGTGACAATTGAAATCTTTTAAAA  100
      |||||| |||  ||||||| |||||||||||||| ||||||||||   ||
seq2  CTAAAT-TAA--TATAATC-CAGTGCTGTGACAA-TGAAATCTTT---AA  85

seq1  ATTTAACATGTGTTTTCTTTTAATCTCGCCTGGCCTTTAATGTAAGGTAC  150
      | |||||||||| |||||||||||||||||| |||||| |||||| ||||
seq2  AATTAACATGTG-TTTCTTTTAATCTCGCCT-GCCTTT-ATGTAA-GTAC  131

seq1  AGACAAGGTCTAAGGTTTGAATCCCCCAGAAAGACCTCTGCAGCCTCCCA  200
      ||||||||||| |||||||||| |||||| |||| |||||||||||||||
seq2  AGACAAGGTCTTAGGTTTGAAT-CCCCAG-AAGA-CTCTGCAGCCTCCCA  178

seq1  AGCTCCCCTAGACAGCATAGAGTGATGGAAGAATGCCCAGTACTTACTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCCCTAGACAGCATAGAGTGATGGAAGAATGCCCAGTACTTACTGT  228

seq1  TGTTAAGCACAGCTCGTTTAGAAGCTGCTCTGTGTAGAATGCGTGTGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGCACAGCTCGTTTAGAAGCTGCTCTGTGTAGAATGCGTGTGTTG  278

seq1  TCTTTGCTGTGTGGTCTTAATGTGTTTCTAATGTGTGTGTCAAATAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCTGTGTGGTCTTAATGTGTTTCTAATGTGTGTGTCAAATAATTA  328

seq1  CCTGTTAAACAGACTGCCAATCTGGCTGAAGCCAATGCTTCTGAAGAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTAAACAGACTGCCAATCTGGCTGAAGCCAATGCTTCTGAAGAAGA  378

seq1  CAAAATTAAAGCAATGATGTCACAGTCTGGCCATGAATACGACCCAATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTAAAGCAATGATGTCACAGTCTGGCCATGAATACGACCCAATCA  428

seq1  AGTAAGTTCATGAATACTGTTATGCTCTAGGAACTTTGGGGTGTGTTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTTCATGAATACTGTTATGCTCTAGGAACTTTGGGGTGTGTTTGC  478

seq1  CCCCGCAATCAGAAGCATTATTTTTCCTAAGTCTCTAATAGAGTACATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGCAATCAGAAGCATTATTTTTCCTAAGTCTCTAATAGAGTACATAT  528

seq1  GAATTCTTTTTCCTTTTCAGTTACATGAAGAAAACTCTAGTAGGTCCACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTCCTTTTCAGTTACATGAAGAAAACTCTAGTAGGTCCACC  578

seq1  ACCTCCATCTTACACCTGCTTTCGTTGTGGTAAACCTGGTCATTATATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCATCTTACACCTGCTTTCGTTGTGGTAAACCTGGTCATTATATTA  628

seq1  AGAATTGCCCAACAAATGGGGTAAGTTCCATGTAGAAACTGATACATACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGCCCAACAAATGGGGTAAGTTCCATGTAGAAACTGATACATACA  678

seq1  TCTAGTTTTTCTTAGAATTATTTAACTATATTTACCATGGTGAAACTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTTTTTCTTAGAATTATTTAACTATATTTACCATGGTGAAACTCTC  728

seq1  TTCCATTAAGATGGTAGATGAGCACAACTTCTGGAGTCTAGGTTGCCAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTAAGATGGTAGATGAGCACAACTTCTGGAGTCTAGGTTGCCAGG  778

seq1  ACCAAGCCTTGGCTGTCTTGTTGAGTAGAGCATGTTCCTTGTCCCTAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGCCTTGGCTGTCTTGTTGAGTAGAGCATGTTCCTTGTCCCTAAGT  828

seq1  CTTGTTTTCTCTGAAAGAGAGCTGATGAGTACTTAGCTCACATGGCAGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTTCTCTGAAAGAGAGCTGATGAGTACTTAGCTCACATGGCAGTT  878

seq1  GCTGGGAAATAACTGAGTTTCTGTGGGGAGGCATCACAAGTAAAACTCAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGAAATAACTGAGTTTCTGTGGGGAGGCATCACAAGTAAAACTCAG  928

seq1  TGAGAAGCGCTGTATGAGCTGTTGGCAGACATGACTAAAGACTGTTCTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGCGCTGTATGAGCTGTTGGCAGACATGACTAAAGACTGTTCTGT  978

seq1  CCTCCTTTCCTCTTGCTTCCTCCAAATAGGATAAGAACTTTGAATCTGGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTTCCTCTTGCTTCCTCCAAATAGGATAAGAACTTTGAATCTGGT  1028

seq1  CCTAGGATCAAAAAGAGCACTGGAATTC  1078
      ||||||||||||||||||||||||||||
seq2  CCTAGGATCAAAAAGAGCACTGGAATTC  1056