BAC Information

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BAC

Clone NameB6Ng01-063D09
Chromosome7 (Build37)
Map Location 100,901,870 - 101,045,566
singlet/doubletdoublet
Overlap geneEG638305
Upstream geneRab30, 4632434I11Rik, Prcp, A830059I20Rik, LOC100040298, LOC666783
Downstream geneEG545982, EG666816
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063D09.bB6Ng01-063D09.g
ACCDH883373DH883374
length1,1971,083
definitionDH883373|Mus musculus domesticus DNA, BAC clone: B6Ng01-063D09, 5' end.DH883374|Mus musculus domesticus DNA, BAC clone: B6Ng01-063D09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,901,870 - 100,903,087)(101,044,479 - 101,045,566)
sequence
gaattcagtaagaatgctacctattcagtaacattcaaaattacctctag
tagagacagtgaaagtaatcaggcattacaatttacttgagtacagctag
aaatctcaaggctagtttacatagtaaatacttagagcaatagctgagtc
actccccattcacaggaatttacaatggcctaggaagaaggtgggttgtc
cttttaggaggaactgaagtattattcatgaaaggattagtagaacagaa
ttcccctggtgcatgtttttcactaggcccagaggaatagcacagtcagg
tatttactaaaggacccttggtggtgggtttaacaatagactagcattgc
atcagaccattcacctgaacactgccataatagactaaatctgtaagcca
gcttcatttaaatgttgtcctctataagtcttaccttgctcatagtgtct
gttctcagtggtaacacagtatataagacagtatcttcatagataatgca
tgtgtcatgtcgctatcccccaaaaggattacgtttaaatgttaatacta
atatttattatttattgagagtattattaaaagattttgcatggaaataa
taacctaactgcacctaatgctaagaatgtcacacatttagactctgcca
tgttttctaagtctccattctttctcaattctagcatatatttaatattg
tcataattcagaacccattacaaaaatgagaattaacttgaaaattttac
tttcctgtttgactattagttatggcatattgaccagaattgattgtctc
tctatttctctctcatctgctcatctgggttctgaccaatgttcttcctt
caagaattccatatacacatacccatgtgtataattcatagatgatcact
actcagtattgttgatctaaagcagaatagaatatacaaactaagatgta
agctaaattactccaacatctcagaattcagatcaatcagatttatgaaa
aatacacacacacacacacaccaccacactttttgtgaattactatgttg
agttacttctgtttgcaatgttggaacaattataaatgctatagtttacc
ttcattaccatacgcattctaatatcggactatggtgatcaggagatttt
ttctattaaataaaataaaaaaacaaaattgaatagacaatttctca
gaattcttttcagctgtccaggacaaagggccacatggcatgaacaggag
atatcaataggtaccttgtctgactatagtaccaacaattgaaaagagaa
tctcatgacccaatgatagaagaaggggaacacacacacacacacacaca
cacacacacacacacacacacacacacacacacacacacacagctagaga
agctggagtgtctgataaattactgagacaaatgctttacctgactgtga
cttgacccaccgagtatgatagtatgcctggaaggcaattgacatgacac
caaagcacagaatgtggctgtcatcctaaaatacctaagtagctaatgtg
tgataacatctacatttgattttctttcttcttcctattacacagccaca
gacatagacacacacagacacacacatagacacacagacacacagacaca
cacagacacacacagacacacaggcacagacacacagacacacagacaca
caacacacacacacacagagcacagatagaggaattctcaaggagcacat
tgcaattaataagctaattatatataagaaacttattattccataagaaa
aactaacttgaattatccattgcatgggtaaggtgacttgactgctgaca
ttggaactggaaataagcttgtattgaggactcatataacaacagctctg
taggcttggttaattttagcagactaaacataagatcagctttatgcaag
tatctcagagtccataagagggcacacagcatggagatatcatataaaca
agtcttagaaggtcttattttaagaaaagaacatcttaaaaaatactttt
tatgttcttctttgtataggacatgtagtcacactggctcagtactgaag
ataaaacttttgcatgtctactagtatttttatagtatcataagatacag
gcaacatcatatgtatagtaataacacaaattatatttgtaaaatacttt
tgtctgggcctcaaacatactgtatttcaacttacagtgacttttcaata
tttacctagtacaggagtgagtcagtgttaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_100901870_100903087
seq2: B6Ng01-063D09.b_43_1239

seq1  GAATTCAGTAAGAATGCTACCTATTCAGTAACATTCAAAATTACCTCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAAGAATGCTACCTATTCAGTAACATTCAAAATTACCTCTAG  50

seq1  TAGAGACAGTGAAAGTAATCAGGCATTACAATTTACTTGAGTACAGCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGACAGTGAAAGTAATCAGGCATTACAATTTACTTGAGTACAGCTAG  100

seq1  AAATCTCAAGGCTAGTTTACATAGTAAATACTTAGAGCAATAGCTGAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCAAGGCTAGTTTACATAGTAAATACTTAGAGCAATAGCTGAGTC  150

seq1  ACTCCCCATTCACAGGAATTTACAATGGCCTAGGAAGAAGGTGGGTTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCATTCACAGGAATTTACAATGGCCTAGGAAGAAGGTGGGTTGTC  200

seq1  CTTTTAGGAGGAACTGAAGTATTATTCATGAAAGGATTAGTAGAACAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGGAGGAACTGAAGTATTATTCATGAAAGGATTAGTAGAACAGAA  250

seq1  TTCCCCTGGTGCATGTTTTTCACTAGGCCCAGAGGAATAGCACAGTCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTGGTGCATGTTTTTCACTAGGCCCAGAGGAATAGCACAGTCAGG  300

seq1  TATTTACTAAAGGACCCTTGGTGGTGGGTTTAACAATAGACTAGCATTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACTAAAGGACCCTTGGTGGTGGGTTTAACAATAGACTAGCATTGC  350

seq1  ATCAGACCATTCACCTGAACACTGCCATAATAGACTAAATCTGTAAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGACCATTCACCTGAACACTGCCATAATAGACTAAATCTGTAAGCCA  400

seq1  GCTTCATTTAAATGTTGTCCTCTATAAGTCTTACCTTGCTCATAGTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCATTTAAATGTTGTCCTCTATAAGTCTTACCTTGCTCATAGTGTCT  450

seq1  GTTCTCAGTGGTAACACAGTATATAAGACAGTATCTTCATAGATAATGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAGTGGTAACACAGTATATAAGACAGTATCTTCATAGATAATGCA  500

seq1  TGTGTCATGTCGCTATCCCCCAAAAGGATTACGTTTAAATGTTAATACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCATGTCGCTATCCCCCAAAAGGATTACGTTTAAATGTTAATACTA  550

seq1  ATATTTATTATTTATTGAGAGTATTATTAAAAGATTTTGCATGGAAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATTATTTATTGAGAGTATTATTAAAAGATTTTGCATGGAAATAA  600

seq1  TAACCTAACTGCACCTAATGCTAAGAATGTCACACATTTAGACTCTGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTAACTGCACCTAATGCTAAGAATGTCACACATTTAGACTCTGCCA  650

seq1  TGTTTTCTAAGTCTCCATTCTTTCTCAATTCTAGCATATATTTAATATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTAAGTCTCCATTCTTTCTCAATTCTAGCATATATTTAATATTG  700

seq1  TCATAATTCAGAACCCATTACAAAAATGAGAATTAACTTGAAAATTTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATTCAGAACCCATTACAAAAATGAGAATTAACTTGAAAATTTTAC  750

seq1  TTTCCTGTTTGACTATTAGTTATGGCATATTGACCAGAATTGATTGTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGTTTGACTATTAGTTATGGCATATTGACCAGAATTGATTGTCTC  800

seq1  TCTATTTCTCTCTCATCTGCTCATCTGGGTTCTGACCAATGTTCTTCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTCTCTCTCATCTGCTCATCTGGGTTCTGACCAATGTTCTTCCTT  850

seq1  CAAGAATTCCATATACACATACCCATGTGTATAATTCATAGATGATCACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATTCCATATACACATACCCATGTGTATAATTCATAGATGATCACT  900

seq1  ACTCAGTATTGTTGATCTAAAGCAGAATAGAATATACAAACTAAGATGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTATTGTTGATCTAAAGCAGAATAGAATATACAAACTAAGATGTA  950

seq1  AGCTAAATTACTCCAACATCTCAGAATTCAAGATCAATCAGATATATGAA  1000
      ||||||||||||||||||||||||||||| ||||||||||||| ||||||
seq2  AGCTAAATTACTCCAACATCTCAGAATTC-AGATCAATCAGATTTATGAA  999

seq1  ATAATACACACACACACACACACACACACACAACTTTTTGTGAATTACTA  1050
      | ||||||||||||||||||||| ||| ||| ||||||||||||||||||
seq2  A-AATACACACACACACACACAC-CAC-CAC-ACTTTTTGTGAATTACTA  1045

seq1  TGTTGAGTTTACTTCTGTTTGCAATGTTGGGAACAATTATAAATGCTATA  1100
      ||||||| |||||||||||||||||||| |||||||||||||||||||||
seq2  TGTTGAG-TTACTTCTGTTTGCAATGTT-GGAACAATTATAAATGCTATA  1093

seq1  GTTTACCTTCATTACCATACGCAATTCTAATATCGGGAACTAATTGGTGA  1150
      |||||||||||||||||||||| |||||||||||||  ||||  ||||||
seq2  GTTTACCTTCATTACCATACGC-ATTCTAATATCGG--ACTA--TGGTGA  1138

seq1  TCAGGAAAGATTCTTTCATATTAAAATAAAATAAAAAATACAAAAATTGA  1200
      |||||  ||||| |||| |||| ||||||||||||||| || ||||||||
seq2  TCAGG--AGATTTTTTC-TATT-AAATAAAATAAAAAA-AC-AAAATTGA  1182

seq1  ATAGGACAAATTTTCTCA  1218
      ||| |||||  |||||||
seq2  ATA-GACAA--TTTCTCA  1197

seq1: chr7_101044479_101045566
seq2: B6Ng01-063D09.g_70_1152 (reverse)

seq1  AGTTAAACACTGACT-ACT-CTGTAACTAGGTAAAATATAGAAAAGTCAC  48
      |||| |||||||||| ||| |||| ||||||| |||||| ||||||||||
seq2  AGTT-AACACTGACTCACTCCTGT-ACTAGGT-AAATATTGAAAAGTCAC  47

seq1  TGTAAGTTGAAATACAGTATGTCTGAGGCCCAGAACAAAAGGTATTTTAC  98
      |||||||||||||||||||||| |||||||||| |||||| |||||||||
seq2  TGTAAGTTGAAATACAGTATGTTTGAGGCCCAG-ACAAAA-GTATTTTAC  95

seq1  AAATATAATTTGTGTTAATTACTATACATATGATTGTTGCCTTGTATTCT  148
      |||||||||||||||| |||||||||||||||| ||||||| |||| |||
seq2  AAATATAATTTGTGTT-ATTACTATACATATGA-TGTTGCC-TGTA-TCT  141

seq1  TATGATACTAT-AAAATACTAGTAGACATGCAAAAGTTTTATCTTCAGTA  197
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TATGATACTATAAAAATACTAGTAGACATGCAAAAGTTTTATCTTCAGTA  191

seq1  CTGAGCCAGTGTGACTACATGTCCTATACAAAGAAGAACATTAAAAGTAT  247
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTGAGCCAGTGTGACTACATGTCCTATACAAAGAAGAACATAAAAAGTAT  241

seq1  TTTTTAAGATGTTCTTTTCTTAAAATAAGACCTTCTAAGACTTGTTTATA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAGATGTTCTTTTCTTAAAATAAGACCTTCTAAGACTTGTTTATA  291

seq1  TGATATCTCCATGCTGTGTGCCCTCTTATGGACTCTGAGATACTTGCATA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATCTCCATGCTGTGTGCCCTCTTATGGACTCTGAGATACTTGCATA  341

seq1  AAGCTGATCTTATGTTTAGTCTGCT-AAATTAACCAAGCCTACAGAGCTG  396
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAGCTGATCTTATGTTTAGTCTGCTAAAATTAACCAAGCCTACAGAGCTG  391

seq1  TTGTTATATGAGTCCTCAATACAAGCTTATTTCCAGTTCCAATGTCAGCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATATGAGTCCTCAATACAAGCTTATTTCCAGTTCCAATGTCAGCA  441

seq1  GTCAAGTCACCTTACCCATGCAATGGATAATTCAAGTTAGTTTTTCTTAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGTCACCTTACCCATGCAATGGATAATTCAAGTTAGTTTTTCTTAT  491

seq1  GGAATAATAAGTTTCTTATATATAATTAGCTTATTAATTGCAATGTGCTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAATAAGTTTCTTATATATAATTAGCTTATTAATTGCAATGTGCTC  541

seq1  CTTGAGAATTCCTCTATCTGTGCTCTGTGTGTGTGTGTGTTGTGTGTCTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGAATTCCTCTATCTGTGCTCTGTGTGTGTGTGTGTTGTGTGTCTG  591

seq1  TGTGTCTGTGTGTCTGTGCCTGTGTGTCTGTGTGTGTCTGTGTGTGTCTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTGTGTGTCTGTGCCTGTGTGTCTGTGTGTGTCTGTGTGTGTCTG  641

seq1  TGTGTCTGTGTGTCTATGTGTGTGTCTGTGTGTGTCTATGTCTGTGGCTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTGTGTGTCTATGTGTGTGTCTGTGTGTGTCTATGTCTGTGGCTG  691

seq1  TGTAATAGGAAGAAGAAAGAAAATCAAATGTAGATGTTATCACACATTAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATAGGAAGAAGAAAGAAAATCAAATGTAGATGTTATCACACATTAG  741

seq1  CTACTTAGGTATTTTAGGATGACAGCCACATTCTGTGCTTTGGTGTCATG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTAGGTATTTTAGGATGACAGCCACATTCTGTGCTTTGGTGTCATG  791

seq1  TCAATTGCCTTCCAGGCATACTATCATACTCGGTGGGTCAAGTCACAGTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTGCCTTCCAGGCATACTATCATACTCGGTGGGTCAAGTCACAGTC  841

seq1  AGGTAAAGCATTTGTCTCAGTAATTTATCAGACACTCCAGCTTCTCTAGC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAGCATTTGTCTCAGTAATTTATCAGACACTCCAGCTTCTCTAGC  891

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  941

seq1  TGTGTGTGTGTGTTCCCCTTCTTCTATCATTGGGTCATGAGATTCTCTTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTTCCCCTTCTTCTATCATTGGGTCATGAGATTCTCTTT  991

seq1  TCAATTGTTGGTACTATAGTCAGACAAGGTACCTATTGATATCTCCTGTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTGTTGGTACTATAGTCAGACAAGGTACCTATTGATATCTCCTGTT  1041

seq1  CATGCCATGTGGCCCTTTGTCCTGGACAGCTGAAAAGAATTC  1088
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCATGTGGCCCTTTGTCCTGGACAGCTGAAAAGAATTC  1083