BAC Information

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BAC

Clone NameB6Ng01-063M21
Chromosome7 (Build37)
Map Location 149,102,180 - 149,261,169
singlet/doubletdoublet
Overlap geneEG623757, Brsk2, 2700078K21Rik
Upstream geneNlrp6, Athl1, Ifitm5, Ifitm2, Ifitm1, LOC665143, Ifitm3, Ifitm6, B4galnt4, Pkp3, Sigirr, Trp53i5, Ptdss2, Rnh1, LOC546015, Hras1, Lrrc56, 1600016N20Rik, Rassf7, AA673488, Irf7, Mucdhl, Sct, Drd4, Deaf1, Tmem80, Eps8l2, B230206H07Rik, Taldo1, LOC100043585, Pddc1, Cend1, Slc25a22, Lrdd, Rplp2, Pnpla2, Efcab4a, Cd151, Polr2l, Tspan4, Chid1, Ap2a2, Muc6, LOC100039649, Muc2, Muc5ac, Muc5b, Tollip
Downstream geneDusp8, LOC100039728, EG668763, LOC100043616, EG665295, LOC100043617, Krtap5-2, LOC100039757, LOC100039767, EG665305, Krtap5-5, EG640223, LOC672428, LOC100039800, LOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd, Syt8, Tnni2, Lsp1, ENSMUSG00000043795, Tnnt3, Mrpl23, Nctc1, H19, Igf2, Igf2as, Ins2, EG640264, EG624121, Th, Ascl2, Tspan32, R74862, Cd81, Tssc4, Trpm5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063M21.bB6Ng01-063M21.g
ACCDH883786DH883787
length1,1051,097
definitionDH883786|Mus musculus domesticus DNA, BAC clone: B6Ng01-063M21, 5' end.DH883787|Mus musculus domesticus DNA, BAC clone: B6Ng01-063M21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,260,053 - 149,261,169)(149,102,180 - 149,103,300)
sequence
gaattctaaacatcacacaatcacagaaactatctgccagtggcaaaatc
acatccctgctagagcatgtggcaaatcatagtcagctgctgtggacaat
ctgaagcagtcccatagcccacatctgggattaaaacacattcccataat
atttctgcatttccccccaaagaaaccaaaattatcactacaggacttac
ctggctctaaaggtcaagtagggtagagaaaggggattcgtctcagggtg
gtggcagaggtttggaagcaatctccccagagaaatcaaatcctatatag
aagacgtcaaagcttctgctagggaggcaaagatcggctccaggcccatt
ctcggcccctgagcactggtctctagatgtaaggtacttcctgggaatag
aagcaagcatcttgaactgaaggtatctttatgaaaggattggactccac
agcccctgcggatcagaaggtgagccagtcttgatcaaggaagaaagagg
aggttatctgggacaatttccaaaactgtcctgaagggttgtgtcccagg
ccacagagaaggatgctgcaagggcaggcttgttgccaaagctcaggcag
atgtgagctccctccagcctttccaagtagaacaaggcttgtctggcttt
agcttctgccaatgtacatcttcactctccagaagcccccgtggtggagg
tgatcgcagaaaggggaagatttgagacagaaaactttggagactttctc
taagtagaagagtgttaaggacactgcagtgtgacctagagagatgtccc
tacatatttgcgggcaccaaactggaaaccagagcactagccgagggaag
tgctggcagccaaagctgacgtttcctcttacccttttctcaccaggaat
cacaccgaggtatgggttcagtggcaccattggcatctgtggaggaagcc
agactcagctgatgcaattagtaggcatgactataatagccaagagagct
ttaaatagaagggtggagtgagtccctaagctggtgaggggtagatcgac
ctggagtgtctgactcagcaacaaaacagtctgggtcctcagtttgctac
tgccc
gaattccaggccaggcagagctacatagtgagaccctgtctcaagcaaaa
aacaaaacaaaacaaaacaaaacaaaagcatgtggggctggagatatgac
tcagcagttaaaaacaccaaagacctggatttggctcccagcacccactc
acagttacttttcattccagttccagggtatcctctcttctggcctttga
aaacaccaggtatgcatagattgttcatatagtcatgaaagcaagccact
catacaaaaaaaaaaataaacaaatctttagaaaccgaaatcagtgttaa
aaatgcaagtatcaatctatataaagccagagcatgaacccagggcagca
gcatcttcctcaggggcgccaggtgattttcatctaaaagcatctctcag
tgagtctctcacataacccactgaaggaaggaggagcatcagctaaaggg
atgcagaaagagcctaggaggacagagagaaaagtacccactgagcaaca
aacaaagcaggtgccagaggatgaaggacagtgctcccaggttgagggtc
accctgagagtgctcccaggacctggagcatcctgcgaatgccacttctg
tcgcctttatttcggaaacacagaaaagtaaggaaatgaaataccaggca
tcccagctgaaaaatgacaggtgcagtttcacagacaagaacatgcatgg
aaaagcctaccaaagttattaggaataattagtgaattttaccaattacc
agatttcaagaaaagtaaaaattatgttgtatttctatagcagtaatatt
cagaaattaaacttatggatacaatttataatactatcaaggctgaccag
atggctcagcaggtaaaggtgcttactgctaacatgatgacctgagttca
atccccaaggcccacatggtggaaacattgcctaacagaagttgtcattt
gactccacacacatatgctgtgggacacagtacacagacccacacacaat
aataaacaacaattcaaattttaaagtaaagagaataaaagactcaggga
aaagaaaatattgcatacatcgataagatttttatgcagaattgtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_149260053_149261169
seq2: B6Ng01-063M21.b_48_1152 (reverse)

seq1  GGGCAGTAGCAGACTGAGGACCCAGAACTGGTTTTGTTGCCTGGAGTCAG  50
      ||||||||||| ||||||||||||| ||| ||||||||||   |||||||
seq2  GGGCAGTAGCAAACTGAGGACCCAG-ACT-GTTTTGTTGC--TGAGTCAG  46

seq1  ACACT-CAGGTCCGATCTACCCCTCACCAGCCTTTTGGGGACTCACTCCA  99
      ||||| ||||| |||||||||||||||||||   || |||||||||||||
seq2  ACACTCCAGGT-CGATCTACCCCTCACCAGC---TTAGGGACTCACTCCA  92

seq1  CCCCTTCTATTTAAAGCTCTCTTTGGCTATTTATAGTCATGCCTACTAAT  149
       |||||||||||||||||||| ||||||| ||||||||||||||||||||
seq2  -CCCTTCTATTTAAAGCTCTC-TTGGCTA-TTATAGTCATGCCTACTAAT  139

seq1  TGCATCAGCCTGAGTCTGGCTTCCTCCACAGATGCCAATGGTGCCACTGA  199
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCAG-CTGAGTCTGGCTTCCTCCACAGATGCCAATGGTGCCACTGA  188

seq1  ACCCATACCTCGGTGTGATTCCTGGTGAGAAAAGGGTAAGAGGAAACGTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATACCTCGGTGTGATTCCTGGTGAGAAAAGGGTAAGAGGAAACGTC  238

seq1  AGCTTTGGCTGCCAGCACTTCCCTCGGCTAGTGCTCTGGTTTCCAGTTTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGGCTGCCAGCACTTCCCTCGGCTAGTGCTCTGGTTTCCAGTTTG  288

seq1  GTGCCCGCAAATATGTAGGGACATCTCTCTAGGTCACACCTGCAGTGTCC  349
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTGCCCGCAAATATGTAGGGACATCTCTCTAGGTCACA-CTGCAGTGTCC  337

seq1  TTAACACTCTTCTACTTAGAGAAAGTCTCCAAAGTTTTCTGTCTCAAATC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACACTCTTCTACTTAGAGAAAGTCTCCAAAGTTTTCTGTCTCAAATC  387

seq1  TTCCCCTTTCTGCGATCACCTCCACCACGGGGGCTTCTGGAGAGTGAAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTTTCTGCGATCACCTCCACCACGGGGGCTTCTGGAGAGTGAAGA  437

seq1  TGTACATTGGCAGAAGCTAAAGCCAGACAAGCCTTGTTCTACTTGGAAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATTGGCAGAAGCTAAAGCCAGACAAGCCTTGTTCTACTTGGAAAG  487

seq1  GCTGGAGGGAGCTCACATCTGCCTGAGCTTTGGCAACAAGCCTGCCCTTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGGGAGCTCACATCTGCCTGAGCTTTGGCAACAAGCCTGCCCTTG  537

seq1  CAGCATCCTTCTCTGTGGCCTGGGACACAACCCTTCAGGACAGTTTTGGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCCTTCTCTGTGGCCTGGGACACAACCCTTCAGGACAGTTTTGGA  587

seq1  AATTGTCCCAGATAACCTCCTCTTTCTTCCTTGATCAAGACTGGCTCACC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCCCAGATAACCTCCTCTTTCTTCCTTGATCAAGACTGGCTCACC  637

seq1  TTCTGATCCGCAGGGGCTGTGGAGTCCAATCCTTTCATAAAGATACCTTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATCCGCAGGGGCTGTGGAGTCCAATCCTTTCATAAAGATACCTTC  687

seq1  AGTTCAAGATGCTTGCTTCTATTCCCAGGAAGTACCTTACATCTAGAGAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAGATGCTTGCTTCTATTCCCAGGAAGTACCTTACATCTAGAGAC  737

seq1  CAGTGCTCAGGGGCCGAGAATGGGCCTGGAGCCGATCTTTGCCTCCCTAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTCAGGGGCCGAGAATGGGCCTGGAGCCGATCTTTGCCTCCCTAG  787

seq1  CAGAAGCTTTGACGTCTTCTATATAGGATTTGATTTCTCTGGGGAGATTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCTTTGACGTCTTCTATATAGGATTTGATTTCTCTGGGGAGATTG  837

seq1  CTTCCAAACCTCTGCCACCACCCTGAGACGAATCCCCTTTCTCTACCCTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAAACCTCTGCCACCACCCTGAGACGAATCCCCTTTCTCTACCCTA  887

seq1  CTTGACCTTTAGAGCCAGGTAAGTCCTGTAGTGATAATTTTGGTTTCTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACCTTTAGAGCCAGGTAAGTCCTGTAGTGATAATTTTGGTTTCTTT  937

seq1  GGGGGGAAATGCAGAAATATTATGGGAATGTGTTTTAATCCCAGATGTGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGAAATGCAGAAATATTATGGGAATGTGTTTTAATCCCAGATGTGG  987

seq1  GCTATGGGACTGCTTCAGATTGTCCACAGCAGCTGACTATGATTTGCCAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGGGACTGCTTCAGATTGTCCACAGCAGCTGACTATGATTTGCCAC  1037

seq1  ATGCTCTAGCAGGGATGTGATTTTGCCACTGGCAGATAGTTTCTGTGATT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTAGCAGGGATGTGATTTTGCCACTGGCAGATAGTTTCTGTGATT  1087

seq1  GTGTGATGTTTAGAATTC  1117
      ||||||||||||||||||
seq2  GTGTGATGTTTAGAATTC  1105

seq1: chr7_149102180_149103300
seq2: B6Ng01-063M21.g_69_1165

seq1  GAATTCCAGGCCAGGCAGAGCTACATAGTGAGACCCTGTCTCAAGCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCCAGGCAGAGCTACATAGTGAGACCCTGTCTCAAGCAAAA  50

seq1  AACAAAACAAAACAAAACAAAACAAAAGCATGTGGGGCTGGAGATATGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACAAAACAAAACAAAACAAAAGCATGTGGGGCTGGAGATATGAC  100

seq1  TCAGCAGTTAAAAACACCAAAGACCTGGATTTGGCTCCCAGCACCCACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGTTAAAAACACCAAAGACCTGGATTTGGCTCCCAGCACCCACTC  150

seq1  ACAGTTACTTTTCATTCCAGTTCCAGGGTATCCTCTCTTCTGGCCTTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTACTTTTCATTCCAGTTCCAGGGTATCCTCTCTTCTGGCCTTTGA  200

seq1  AAACACCAGGTATGCATAGATTGTTCATATAGTCATGAAAGCAAGCCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCAGGTATGCATAGATTGTTCATATAGTCATGAAAGCAAGCCACT  250

seq1  CATACAAAAAAAAAAATAAACAAATCTTTAGAAACCGAAATCAGTGTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAAAAAAAAAAATAAACAAATCTTTAGAAACCGAAATCAGTGTTAA  300

seq1  AAATGCAAGTATCAATCTATATAAAGCCAGAGCATGAACCCAGGGCAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAAGTATCAATCTATATAAAGCCAGAGCATGAACCCAGGGCAGCA  350

seq1  GCATCTTCCTCAGGGGCGCCAGGTGATTTTCATCTAAAAGCATCTCTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTCCTCAGGGGCGCCAGGTGATTTTCATCTAAAAGCATCTCTCAG  400

seq1  TGAGTCTCTCACATAACCCACTGAAGGAAGGAGGAGCATCAGCTAAAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTCTCACATAACCCACTGAAGGAAGGAGGAGCATCAGCTAAAGGG  450

seq1  ATGCAGAAAGAGCCTAGGAGGACAGAGAGAAAAGTACCCACTGAGCAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAAAGAGCCTAGGAGGACAGAGAGAAAAGTACCCACTGAGCAACA  500

seq1  AACAAAGCAGGTGCCAGAGGATGAAGGACAGTGCTCCCAGGTTGAGGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGCAGGTGCCAGAGGATGAAGGACAGTGCTCCCAGGTTGAGGGTC  550

seq1  ACCCTGAGAGTGCTCCCAGGACCTGGAGCATCCTGCGAATGCCACTTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGAGAGTGCTCCCAGGACCTGGAGCATCCTGCGAATGCCACTTCTG  600

seq1  TCGCCTTTATTTCGGAAACACAGAAAAGTAAGGAAATGAAATACCAGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCTTTATTTCGGAAACACAGAAAAGTAAGGAAATGAAATACCAGGCA  650

seq1  TCCCAGCTGAAAAATGACAGGTGCAGTTTCACAGACAAGAACATGCATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCTGAAAAATGACAGGTGCAGTTTCACAGACAAGAACATGCATGG  700

seq1  AAAAGCCTACCAAAGTTATTAGGAATAATTAGTGAATTTTACCAATTACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCTACCAAAGTTATTAGGAATAATTAGTGAATTTTACCAATTACC  750

seq1  AGATTTCAAGAAAAGTAAAAATTATGTTGTATTTCTATAGCAGTAATATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCAAGAAAAGTAAAAATTATGTTGTATTTCTATAGCAGTAATATT  800

seq1  CAGAAATTAAACTTATGGATACAATTTATAATACTATCAAGGCTGACCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATTAAACTTATGGATACAATTTATAATACTATCAAGGCTGACCAG  850

seq1  ATGGCTCAGCAGGTAAAGGTGCTTACTGCTAAACATGATGACCTGAGTTC  900
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATGGCTCAGCAGGTAAAGGTGCTTACTGCT-AACATGATGACCTGAGTTC  899

seq1  AATCCCCAAGGCCCACATGGTGGAAAACAATTGCCTAACAGAAGTTGTCA  950
      ||||||||||||||||||||||||||   |||||||||||||||||||||
seq2  AATCCCCAAGGCCCACATGGTGGAAA--CATTGCCTAACAGAAGTTGTCA  947

seq1  TTTGACCTCCACACACATATGCTGTGGGACACAGTTACAACAGACACACA  1000
      ||||| |||||||||||||||||||||||||||| ||| |||||| ||||
seq2  TTTGA-CTCCACACACATATGCTGTGGGACACAG-TAC-ACAGACCCACA  994

seq1  CACAAATAAATAAACAAACAAATTCAAATTTTTAAAAGTTAAAGAGAATA  1050
      |||||   |||||||||   ||||||||||||  |||| |||||||||| 
seq2  CACAA--TAATAAACAA--CAATTCAAATTTT--AAAG-TAAAGAGAAT-  1036

seq1  AAAAGACATCCAGGGACAAGAAAATATTTGCAAATTACCAATCAGATAAA  1100
      |||||||   |||||| ||||||||| |||||   |||  ||| ||||| 
seq2  AAAAGAC--TCAGGGAAAAGAAAATA-TTGCA---TAC--ATC-GATAA-  1076

seq1  GGATTTTTATGCAGAA-TGTAC  1121
       ||||||||||||||| |||||
seq2  -GATTTTTATGCAGAATTGTAC  1097