BAC Information

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BAC

Clone NameB6Ng01-064C23
Chromosome7 (Build37)
Map Location 93,461,636 - 93,542,958
singlet/doubletdoublet
Overlap geneOlfr308, Olfr307, Olfr306-ps1, Olfr305, Olfr304
Upstream geneVmn2r-ps69, LOC330581, LOC100039339, Vmn2r70, Vmn2r-ps72, EG233445, Vmn2r-ps74, EG244114, EG620928, EG546980, LOC666382, LOC637652, LOC637667, EG666418, LOC100039471, EG546981, Vmn2r-ps86, Vmn2r76, Olfr310, Olfr309
Downstream geneOlfr303, Olfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477, Nox4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064C23.bB6Ng01-064C23.g
ACCDH884049DH884050
length1,1301,059
definitionDH884049|Mus musculus domesticus DNA, BAC clone: B6Ng01-064C23, 5' end.DH884050|Mus musculus domesticus DNA, BAC clone: B6Ng01-064C23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,461,636 - 93,462,785)(93,541,879 - 93,542,958)
sequence
gaattccagtctcatgctatcttatatttgtttgtttttgattttgaaga
ttgtatcctggggtagtgagcaacattcccagcttgttttgtgaacattc
tatatgaaaaagtcataatgccaataaaagtaaatttatctttaaaatct
ttgtctgaattaaattacaatcgactggtgattttttatgccatggttga
attaataaataaatgcattatctagctcttgaatatccctatttgtgcca
caatttcagagttaagacttttacaaatactcacttcagtgattggctgt
ggttaggtagaagcttgtattaaatcaacataaaaaaaaactaaaaacat
agacagtaaccatattcaattccacatctaagtatcttttctacactttc
ttgactatcagatcctttttatggttctccaagacttctagtcctcattc
aaatccagcctgcccaggagagagtgccttgagccactttgcttagtgcc
atagtaaaatggatctcaaagggacaattaaaacatgtcaacactacatt
aacaatcacaaagtggagtaactttggttttcatctcacaagaatataga
gtagtggcctaattaatgagagaaattggagttaccagtgatgcaaggag
tgaatgggtggacattgtctgggactatctgtcccgaccaatagaactta
gaatgagtagtaactcaatggttgaaatcttccctgtcttatgcaagacc
atggacttggaaaaaattctacacggaaaaaaatgtaaaaaatataatat
atagaaataataattctaaaagaatgattaaggcaacatacaagagttct
cttcttatgcctctatatagtcaagcagggatctataaattattgggtga
tatagttcttcattgaatatacagacagtattagtacaaagccttttaac
aaatgatgaaacttctgctcatctttcaatgctctttaatattggtgtcc
acaacacattatttctgggacagactcatgataatgtcacaacgagatct
ttactgactttgcattatataaaacattatggatgaaataacatctcagt
taacatgcgaattactctcttattgttgcc
gaattcatttttgaggtcttttgattagatttccattagactcttacaag
caggctcactggttcatttactacaaactttatggataaggctttcttta
aaactattcatttggaggaaaccaactgtggaaaattttataggcaaaaa
gttttcattgtttattctgtcattttgttgttatactaaatgttataaat
agaatagctataacataacttttcagtagcattcagagcaaactatgaag
tttgcagaagtgatattgtcagagttcctttttaaaacgaaaaagaatag
tgtttctagttaacatagcaagctcttctttcaagactaaaaacaataat
aataataaggcgctggagattttccattgctatttaatggaaattaataa
tctttattttttatttattttagtttattttacgaacagaagagatggca
aggaagggtaaatcacaaatatcttactggtgagtgtttatgtggctgcc
tctataatggcattccttctaaatgtgagagtgagtgccatcagaaagaa
cgtagagaatctgcaataccaccatagacacagggtgagaatctgcagta
caacaaatcaccaggagactgctaaccagagtgaatcttaagagccacca
tatggggtacttaagagactataataaaataagagatttgtacacaagct
catgcctgatatttttcttgaactcgaacatgaaatcctactggaataca
taaaagttataagattaattatgtttgcttcttaaaattagtttaatcat
taaaactttcatagaggtgtgtaataatctggccatattaaccctttcgt
gaatgccttattgtttccccatccccacaaaccctctgtgctgaaaagtc
cccactcactttcatatctcctgctttatgacatgttatcagggactttg
tctgggcatgagtgtggagctatccactgaaacatgatcagtgctataaa
tgaagactgatttcacttccttgacaacttcagggtcaatagtttctggg
agttcagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_93461636_93462785
seq2: B6Ng01-064C23.b_50_1179

seq1  GAATTCCAGTCTCATGCTATCTTATATTTGTTTGTTTTTGATTTTGAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTCTCATGCTATCTTATATTTGTTTGTTTTTGATTTTGAAGA  50

seq1  TTGTATCCTGGGGTAGTGAGCAACATTCCCAGCTTGTTTTGTGAACATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATCCTGGGGTAGTGAGCAACATTCCCAGCTTGTTTTGTGAACATTC  100

seq1  TATATGAAAAAGTCATAATGCCAATAAAAGTAAATTTATCTTTAAAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGAAAAAGTCATAATGCCAATAAAAGTAAATTTATCTTTAAAATCT  150

seq1  TTGTCTGAATTAAATTACAATCGACTGGTGATTTTTTATGCCATGGTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGAATTAAATTACAATCGACTGGTGATTTTTTATGCCATGGTTGA  200

seq1  ATTAATAAATAAATGCATTATCTAGCTCTTGAATATCCCTATTTGTGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATAAATAAATGCATTATCTAGCTCTTGAATATCCCTATTTGTGCCA  250

seq1  CAATTTCAGAGTTAAGACTTTTACAAATACTCACTTCAGTGATTGGCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCAGAGTTAAGACTTTTACAAATACTCACTTCAGTGATTGGCTGT  300

seq1  GGTTAGGTAGAAGCTTGTATTAAATCAACATAAAAAAAAACTAAAAACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGGTAGAAGCTTGTATTAAATCAACATAAAAAAAAACTAAAAACAT  350

seq1  AGACAGTAACCATATTCAATTCCACATCTAAGTATCTTTTCTACACTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTAACCATATTCAATTCCACATCTAAGTATCTTTTCTACACTTTC  400

seq1  TTGACTATCAGATCCTTTTTATGGTTCTCCAAGACTTCTAGTCCTCATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTATCAGATCCTTTTTATGGTTCTCCAAGACTTCTAGTCCTCATTC  450

seq1  AAATCCAGCCTGCCCAGGAGAGAGTGCCTTGAGCCACTTTGCTTAGTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCAGCCTGCCCAGGAGAGAGTGCCTTGAGCCACTTTGCTTAGTGCC  500

seq1  ATAGTAAAATGGATCTCAAAGGGACAATTAAAACATGTCAACACTACATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAAAATGGATCTCAAAGGGACAATTAAAACATGTCAACACTACATT  550

seq1  AACAATCACAAAGTGGAGTAACTTTGGTTTTCATCTCACAAGAATATAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATCACAAAGTGGAGTAACTTTGGTTTTCATCTCACAAGAATATAGA  600

seq1  GTAGTGGCCTAATTAATGAGAGAAATTGGAGTTACCAGTGATGCAAGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGGCCTAATTAATGAGAGAAATTGGAGTTACCAGTGATGCAAGGAG  650

seq1  TGAATGGGTGGACATTGTCTGGGACTATCTGTCCCGACCAATAGAACTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGGGTGGACATTGTCTGGGACTATCTGTCCCGACCAATAGAACTTA  700

seq1  GAATGAGTAGTAACTCAATGGTTGAAATCTTCCCTGTCTTATGCAAGACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGTAGTAACTCAATGGTTGAAATCTTCCCTGTCTTATGCAAGACC  750

seq1  ATGGACTTGGAAAAAATTCTACACGGAAAAAAATGTAAAAAATATAATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACTTGGAAAAAATTCTACACGGAAAAAAATGTAAAAAATATAATAT  800

seq1  ATAGAAATAATAATTCTAAAAGAATGATTAAGGCAACATACAAGAGTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAATAATAATTCTAAAAGAATGATTAAGGCAACATACAAGAGTTCT  850

seq1  CTTCTTATGCCTCTATATAGTCAAGCAGGGATCTATAAATTATTGGGTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTATGCCTCTATATAGTCAAGCAGGGATCTATAAATTATTGGGTGA  900

seq1  TATTAGTTCTTCAATTGAATATAACAGACAGTATTAAGTACAAAGCCTTT  950
      || ||||||||| ||||||||| |||||||||||| ||||||||||||||
seq2  TA-TAGTTCTTC-ATTGAATAT-ACAGACAGTATT-AGTACAAAGCCTTT  946

seq1  TAAACAAATTGATTGAAAACTTCTGCTCATCTTTCCAATGCTCTTTAATA  1000
      | |||||| ||||   |||||||||||||||||| |||||||||||||||
seq2  T-AACAAA-TGAT--GAAACTTCTGCTCATCTTT-CAATGCTCTTTAATA  991

seq1  TT-GTGTCCCACAAACACATTATTTCCTGGGACAGACTCATGATAATGTC  1049
      || |||| |||| |||||||||||| ||||||||||||||||||||||||
seq2  TTGGTGT-CCAC-AACACATTATTT-CTGGGACAGACTCATGATAATGTC  1038

seq1  ACAACGAGATCTTTTACTTGACATTTGCATTATTATAAACCATTATGGAA  1099
      ||||||||||| ||||| |||| ||||||||| |||||| ||||||||| 
seq2  ACAACGAGATC-TTTAC-TGAC-TTTGCATTA-TATAAAACATTATGGA-  1083

seq1  TTGAATATACATCTTCAAGTTTAACATGCAGATTTACTCT-ATATTGATG  1148
       ||||   ||||| |||   ||||||||| || |||||||  ||||| ||
seq2  -TGAAATAACATC-TCA--GTTAACATGC-GAATTACTCTCTTATTGTTG  1128

seq1  CC  1150
      ||
seq2  CC  1130

seq1: chr7_93541879_93542958
seq2: B6Ng01-064C23.g_64_1122 (reverse)

seq1  GACTGAAACTTCCCAGGAAAACTATTGACACCTGAAGGTTGTCAGGGAAG  50
      |||||||   ||||||  ||||||||||| |||||| ||||||| |||||
seq2  GACTGAA--CTCCCAG--AAACTATTGAC-CCTGAA-GTTGTCAAGGAAG  44

seq1  TGAAATTCAATGTCTTCAATTTTATAGCCACTGATCCATGTTTCAGTGGA  100
      ||||| |||  |||||||  ||||||| ||||||| ||||||||||||||
seq2  TGAAA-TCA--GTCTTCA--TTTATAG-CACTGAT-CATGTTTCAGTGGA  87

seq1  TAGCTCCACACTCATGCCCAGACAAAGTCCCTTGATAAACATGGTCATAA  150
      ||||||||||||||||||||||||||||||| |||| ||||| |||||||
seq2  TAGCTCCACACTCATGCCCAGACAAAGTCCC-TGAT-AACAT-GTCATAA  134

seq1  AGCAGGGAGATATGAAAGTGGAGTGGGGACTTTTTCAGCACAGAGGGTTT  200
      |||| |||||||||||||| |||||||||| |||||||||||||||||||
seq2  AGCA-GGAGATATGAAAGT-GAGTGGGGAC-TTTTCAGCACAGAGGGTTT  181

seq1  TGTTGGGGATGGGGAAACAATAAGGCATTCACGAAAGGGTTAATATGGCC  250
         |||||||||||||||||||||||||||||||||||||||||||||||
seq2  --GTGGGGATGGGGAAACAATAAGGCATTCACGAAAGGGTTAATATGGCC  229

seq1  AGATTATTACACACCTCTATGAAAGTTTTAATGATTAAACTAATTTTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATTACACACCTCTATGAAAGTTTTAATGATTAAACTAATTTTAAG  279

seq1  AAGCAAACATAATTAATCTTATAACTTTTATGTATTCCAGTAGGATTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAACATAATTAATCTTATAACTTTTATGTATTCCAGTAGGATTTCA  329

seq1  TGTTCGAGTTCAAGAAAAATATCAGGCATGAGCTTGTGTACAAATCTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCGAGTTCAAGAAAAATATCAGGCATGAGCTTGTGTACAAATCTCTT  379

seq1  ATTTTATTATAGTCTCTTAAGTACCCCATATGGTGGCTCTTAAGATTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTATAGTCTCTTAAGTACCCCATATGGTGGCTCTTAAGATTCAC  429

seq1  TCTGGTTAGCAGTCTCCTGGTGATTTGTTGTACTGCAGATTCTCACCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTAGCAGTCTCCTGGTGATTTGTTGTACTGCAGATTCTCACCCTG  479

seq1  TGTCTATGGTGGTATTGCAGATTCTCTACGTTCTTTCTGATGGCACTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATGGTGGTATTGCAGATTCTCTACGTTCTTTCTGATGGCACTCAC  529

seq1  TCTCACATTTAGAAGGAATGCCATTATAGAGGCAGCCACATAAACACTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACATTTAGAAGGAATGCCATTATAGAGGCAGCCACATAAACACTCA  579

seq1  CCAGTAAGATATTTGTGATTTACCCTTCCTTGCCATCTCTTCTGTTCGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAAGATATTTGTGATTTACCCTTCCTTGCCATCTCTTCTGTTCGTA  629

seq1  AAATAAACTAAAATAAATAAAAAATAAAGATTATTAATTTCCATTAAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACTAAAATAAATAAAAAATAAAGATTATTAATTTCCATTAAATA  679

seq1  GCAATGGAAAATCTCCAGCGCCTTATTATTATTATTGTTTTTAGTCTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGGAAAATCTCCAGCGCCTTATTATTATTATTGTTTTTAGTCTTGA  729

seq1  AAGAAGAGCTTGCTATGTTAACTAGAAACACTATTCTTTTTCGTTTTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAGCTTGCTATGTTAACTAGAAACACTATTCTTTTTCGTTTTAAA  779

seq1  AAGGAACTCTGACAATATCACTTCTGCAAACTTCATAGTTTGCTCTGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACTCTGACAATATCACTTCTGCAAACTTCATAGTTTGCTCTGAAT  829

seq1  GCTACTGAAAAGTTATGTTATAGCTATTCTATTTATAACATTTAGTATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTGAAAAGTTATGTTATAGCTATTCTATTTATAACATTTAGTATAA  879

seq1  CAACAAAATGACAGAATAAACAATGAAAACTTTTTGCCTATAAAATTTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAATGACAGAATAAACAATGAAAACTTTTTGCCTATAAAATTTTC  929

seq1  CACAGTTGGTTTCCTCCAAATGAATAGTTTTAAAGAAAGCCTTATCCATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTGGTTTCCTCCAAATGAATAGTTTTAAAGAAAGCCTTATCCATA  979

seq1  AAGTTTGTAGTAAATGAACCAGTGAGCCTGCTTGTAAGAGTCTAATGGAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGTAGTAAATGAACCAGTGAGCCTGCTTGTAAGAGTCTAATGGAA  1029

seq1  ATCTAATCAAAAGACCTCAAAAATGAATTC  1080
      ||||||||||||||||||||||||||||||
seq2  ATCTAATCAAAAGACCTCAAAAATGAATTC  1059