BAC Information

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BAC

Clone NameB6Ng01-064K07
Chromosome7 (Build37)10 (Build37)
Map Location 138,304,604 - 138,305,140129,903,939 - 129,905,112
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneFgfr2, LOC546005, Ate1, LOC100043163, Nsmce4a, Tacc2, LOC619876, Btbd16, EG434249, Plekha1, Htra1, Dmbt1, 4933402N03Rik
Downstream gene5430419D17Rik, LOC546006, LOC100043173, Cuzd1, 1700007K09Rik, 1700063I17Rik, 2310057M21Rik, Pstk, Ikzf5, Acadsb, Hmx3, Hmx2, Bub3, LOC677073, LOC100043679, Gpr26, Cpxm2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064K07.bB6Ng01-064K07.g
ACCDH884365DH884366
length8501,144
definitionDH884365|Mus musculus domesticus DNA, BAC clone: B6Ng01-064K07, 5' end.DH884366|Mus musculus domesticus DNA, BAC clone: B6Ng01-064K07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(138,304,604 - 138,305,140)(129,903,939 - 129,905,112)
sequence
gaattccacacccctaagccccttaccccataaaaacccctagctttcga
gctttgtggccgacatccgttatctcctgtgtgggatgcatgtcggtcag
gagctctgtcattaaactacctcgtgtaattacatcaagtcggtctatct
attcgtgattctttgggtgcctgccgaatggggaattgagtgggggtttc
cccactaggttctatcatttggaggccccagcgagatctgcgtgacaccc
aggaaccccgaaagaccccttggaggtacatttgtttgtgtgagtcttgc
atgttgtctgttgtctaagtgtggcaccgctgaatttgtgtcttggtttt
tcagttctgagattgtgggtttgagtcccaccttgtgtcttggtttttta
gttctgagattgtgggtttgagtcccaccttgtgtcttgttttttagttc
tgagattgtgggttcgagtcccacctgggttcccagttctggtattctgt
attctggcagctgccactgtgggccatgaggacctagtggctgcgggagg
gagatgtcctaagaccccgcacgctgctacactggaagacgttccacagg
tggaagcagagtcactacccccccctccccccccaatcaggaagggtgtc
aatgtggaatccgacccccaacaggaagtcgtgtttggctggttgtacaa
gtccaggcatggacgagtgtgcttagatatactagtgtctttttttctct
ggtgctgtcttattttgttgtggttttcatcatgggacatagctggtttc
tggtcggtttggtcccaagggttgactgattatcttgtttggtttaggcc

gaattcttgggtaggagaattgaatattcaagactagtaggagttcttga
atctgagcctaaaaacagtgtttttgctgtttgcttgttttgtttttccc
atttaatataaatcatgtatgtgttgtagagagactcatgtccatgagtg
catgaggacagaagggggcaatgaaaacaaaataattggattcagaggca
gttgtgagcctggcaaccaaattcccttaatttccaaactatctctctag
ccccaagcacaaaacattcgaatacatttctattcatattaaagctaaag
atgccagcaaataccacatgagatctaggattacagagcctgaccttgtc
ttcattttctgaaagtcagaagatccctttttgtctctgcctttcaattg
agcaaattaatgtcatgtaacatcatgcctggcttgaatattatgttgtt
attaaaaagaaattactaaagaaaacacttcattcatactgttttgtgcc
taagattcattccttgatttgtattgaattaggcaaaaagttacagcttg
atttctcttgctgtgctaaaaactaacaaaaacaacatagcaatttttag
ggttcctttgggttcctagatatagtctggcatagagaaaacctaggcag
gaagtgaaggagaccatggaggaatacaaattgctggcttgtccagcatg
attttctaaacttcgcagggctcacaggctaagtttagcactgcccacat
tgggaagggttctgctacattgatcagtaatcaagaaaacagcttaaagt
cattttttcattccctcctctgaagtgacacgaatttgtcaaccagcaca
atattttgcatatgtcttaccacattaacctgtgtagggggcagtgtaca
tgatgtgcaattcacaaagaagagattagaggcaaaattaaattaaatgg
aaaaataattcgatgaaaagacatctggagaagaatttgtggatacatct
taacaataagcaaaggattcgaatacttgtgcccattgtaagttcatcaa
aagttgacttgctggggatagtgatctgtacaagtacattctccaaggta
tcacacagattccactaacacactaccattgccaggagtgtgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_138304604_138305140
seq2: B6Ng01-064K07.b_355_893

seq1  TGTCTAAGTGTGGCACCACTGAATTTGTGTCTTGGTTTTTC---------  41
      ||||||||||||||||| |||||||||||||||||||||||         
seq2  TGTCTAAGTGTGGCACCGCTGAATTTGTGTCTTGGTTTTTCAGTTCTGAG  50

seq1  --------------------------------------------------  41
                                                        
seq2  ATTGTGGGTTTGAGTCCCACCTTGTGTCTTGGTTTTTTAGTTCTGAGATT  100

seq1  ----------------------------------AGTTCTGAGATTGTGG  57
                                        ||||||||||||||||
seq2  GTGGGTTTGAGTCCCACCTTGTGTCTTGTTTTTTAGTTCTGAGATTGTGG  150

seq1  GTTCCAGTCCCACCTGGGTTCCCAGTTCTGGTATTCTGTATTCTGGCAGC  107
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGAGTCCCACCTGGGTTCCCAGTTCTGGTATTCTGTATTCTGGCAGC  200

seq1  TGCCACTGTGGACCGTGAGGACCTAGTGGCTGCAGCAGGGAGACATCCTA  157
      ||||||||||| || |||||||||||||||||| | |||||||  |||||
seq2  TGCCACTGTGGGCCATGAGGACCTAGTGGCTGCGGGAGGGAGATGTCCTA  250

seq1  AGGCCCTGCAAGCTGCAACCCTGGAAGACGTTCCACAGGT----------  197
      || ||| ||| ||||| || ||||||||||||||||||||          
seq2  AGACCCCGCACGCTGCTACACTGGAAGACGTTCCACAGGTGGAAGCAGAG  300

seq1  ----------------------------GGAAGGGGGTCGATGTGGAATC  219
                                  ||||||| ||| ||||||||||
seq2  TCACTACCCCCCCCTCCCCCCCCAATCAGGAAGGGTGTCAATGTGGAATC  350

seq1  CGACCCCCGTCAGGAAGTTGCGTTTGGCTCATTGTACAAGTCCAGGCTCG  269
      ||||||||  |||||||| | ||||||||  ||||||||||||||||  |
seq2  CGACCCCCAACAGGAAGTCGTGTTTGGCTGGTTGTACAAGTCCAGGCATG  400

seq1  GACGAGTGTGCTTAGATATACTGGTGTCTTTTTTTCTCTGTTGCTGTCTT  319
      |||||||||||||||||||||| ||||||||||||||||| |||||||||
seq2  GACGAGTGTGCTTAGATATACTAGTGTCTTTTTTTCTCTGGTGCTGTCTT  450

seq1  GTTTTTGTTTGTGGTTTTCGTCATGGAACACAGACACCATACATCAGAGG  369
       ||||   ||||||||||| |||||| ||| ||                 
seq2  ATTTT--GTTGTGGTTTTCATCATGGGACATAG-----------------  481

seq1  TAAAGTGGAATCCCTCCCTGCCTGTCTGTCTGTGTGTCTGTCTGTCTTGT  419
                                                        
seq2  --------------------------------------------------  481

seq1  TCACTTGTGTGTCCTCCATTAGACCACCTTCTGATTCTGTTTTGCTTTTG  469
                                                        
seq2  --------------------------------------------------  481

seq1  GTTTGTCTGGTTTCAGGTCTGGTTTGGTCCCAAGGGGTTGACTGATTATC  519
            |||||||| |||| ||||||||||||| ||||||||||||||||
seq2  ------CTGGTTTCTGGTC-GGTTTGGTCCCAA-GGGTTGACTGATTATC  523

seq1  TTGGTTTGGTTTTAGGCC  537
      || |||||| ||||||||
seq2  TT-GTTTGG-TTTAGGCC  539

seq1: chr10_129903939_129905112
seq2: B6Ng01-064K07.g_68_1211

seq1  GAATTCTTGGGTAGGAGAATTGAATATTCAAGACTAGTAGGAGTTCTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGGTAGGAGAATTGAATATTCAAGACTAGTAGGAGTTCTTGA  50

seq1  ATCTGAGCCTAAAAACAGTGTTTTTGCTGTTTGCTTGTTTTGTTTTTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGCCTAAAAACAGTGTTTTTGCTGTTTGCTTGTTTTGTTTTTCCC  100

seq1  ATTTAATATAAATCATGTATGTGTTGTAGAGAGACTCATGTCCATGAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATATAAATCATGTATGTGTTGTAGAGAGACTCATGTCCATGAGTG  150

seq1  CATGAGGACAGAAGGGGGCAATGAAAACAAAATAATTGGATTCAGAGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGGACAGAAGGGGGCAATGAAAACAAAATAATTGGATTCAGAGGCA  200

seq1  GTTGTGAGCCTGGCAACCAAATTCCCTTAATTTCCAAACTATCTCTCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGAGCCTGGCAACCAAATTCCCTTAATTTCCAAACTATCTCTCTAG  250

seq1  CCCCAAGCACAAAACATTCGAATACATTTCTATTCATATTAAAGCTAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAGCACAAAACATTCGAATACATTTCTATTCATATTAAAGCTAAAG  300

seq1  ATGCCAGCAAATACCACATGAGATCTAGGATTACAGAGCCTGACCTTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGCAAATACCACATGAGATCTAGGATTACAGAGCCTGACCTTGTC  350

seq1  TTCATTTTCTGAAAGTCAGAAGATCCCTTTTTGTCTCTGCCTTTCAATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTCTGAAAGTCAGAAGATCCCTTTTTGTCTCTGCCTTTCAATTG  400

seq1  AGCAAATTAATGTCATGTAACATCATGCCTGGCTTGAATATTATGTTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATTAATGTCATGTAACATCATGCCTGGCTTGAATATTATGTTGTT  450

seq1  ATTAAAAAGAAATTACTAAAGAAAACACTTCATTCATACTGTTTTGTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAAGAAATTACTAAAGAAAACACTTCATTCATACTGTTTTGTGCC  500

seq1  TAAGATTCATTCCTTGATTTGTATTGAATTAGGCAAAAAGTTACAGCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTCATTCCTTGATTTGTATTGAATTAGGCAAAAAGTTACAGCTTG  550

seq1  ATTTCTCTTGCTGTGCTAAAAACTAACAAAAACAACATAGCAATTTTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCTTGCTGTGCTAAAAACTAACAAAAACAACATAGCAATTTTTAG  600

seq1  GGTTCCTTTGGGTTCCTAGATATAGTCTGGCATAGAGAAAACCTAGGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCTTTGGGTTCCTAGATATAGTCTGGCATAGAGAAAACCTAGGCAG  650

seq1  GAAGTGAAGGAGACCATGGAGGAATACAAATTGCTGGCTTGTCCAGCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGAAGGAGACCATGGAGGAATACAAATTGCTGGCTTGTCCAGCATG  700

seq1  ATTTTCTAAACTTCCCAGGGCTCACAGGCTAAGTTTAGCACTGCCCACAT  750
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATTTTCTAAACTTCGCAGGGCTCACAGGCTAAGTTTAGCACTGCCCACAT  750

seq1  TGGGAAGGGTTCTGCTACATTGATCAGTAATCAAGAAAACAGCTTAAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGGGTTCTGCTACATTGATCAGTAATCAAGAAAACAGCTTAAAGT  800

seq1  CATTTTTTCATTCCCTCCTCTGAAGTGACACGAATTTGTCAACCAGCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTCATTCCCTCCTCTGAAGTGACACGAATTTGTCAACCAGCACA  850

seq1  ATATTTTGCATATGTCTTACCACATTAACCTGTGTAGGGGGCAGTGTACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTGCATATGTCTTACCACATTAACCTGTGTAGGGGGCAGTGTACA  900

seq1  TGATGTGCAATTCACAAAGAAGAGATTAAGAGGCAAAAATTAAATTAAAT  950
      ||||||||||||||||||||||||||| |||||| |||||||||||||||
seq2  TGATGTGCAATTCACAAAGAAGAGATT-AGAGGC-AAAATTAAATTAAAT  948

seq1  GGAAAAAATAAATTCGATGAAAAAGACATCTGGGGAAGAAATTTGTGGAT  1000
      |||||||   ||||||||| ||||||||||||| |||| |||||||||||
seq2  GGAAAAA--TAATTCGATG-AAAAGACATCTGGAGAAG-AATTTGTGGAT  994

seq1  ACATCTTAACAAATAAGCAAAGGATTCGGAAATACTTGTGCCCCATGTAA  1050
      |||||||||| |||||||||||||||||  |||||||||||||  |||  
seq2  ACATCTTAAC-AATAAGCAAAGGATTCG--AATACTTGTGCCCATTGT--  1039

seq1  AAGTTCATCAAAAGTTGACCTTTGCTGAGGAT-GTGATCTGTAACAAGTA  1099
      |||||||||||||||||||  |||||| |||| ||||||||| |||||||
seq2  AAGTTCATCAAAAGTTGAC--TTGCTGGGGATAGTGATCTGT-ACAAGTA  1086

seq1  CAATTCTCCAAAAAGGTATTCAACACAGAATTCCACCAGACCAACACACT  1149
      | |||||||   |||||||   |||||| |||||     || ||||||| 
seq2  C-ATTCTCC---AAGGTAT--CACACAG-ATTCC-----ACTAACACAC-  1123

seq1  TACCTCATTGCCAGGGAAGTGTGAC  1174
      |||  ||||||||||  ||||||||
seq2  TAC--CATTGCCAGG--AGTGTGAC  1144