BAC Information

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BAC

Clone NameB6Ng01-066B24
Chromosome2 (Build37)7 (Build37)
Map Location 117,947,040 - 117,948,192124,972,257 - 124,972,312
singlet/doubletsingletsinglet
Overlap geneThbs1
Upstream geneSpred1, LOC624574, 2610510H03Rik, Rasgrp1
Downstream geneFsip1, Gpr176, 1700054M17Rik, Eif2ak4, Srp14, LOC668859, Bmf, LOC640461, Bub1b, Pak6, Gm1337, Plcb2, LOC100043272, A430105I19Rik, Disp2, D2Ertd750e, Ivd, Bahd1, Chst14, LOC677379, Ccdc32, Rpusd2, Casc5, Rad51
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066B24.bB6Ng01-066B24.g
ACCDH885389DH885390
length1,14078
definitionDH885389|Mus musculus domesticus DNA, BAC clone: B6Ng01-066B24, 5' end.DH885390|Mus musculus domesticus DNA, BAC clone: B6Ng01-066B24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(117,947,040 - 117,948,192)(124,972,257 - 124,972,312)
sequence
gaattcaatagactccaagccctcccattactggggtaccccagagccat
ttgcaatgtgtgcctgtacagagtctgcctgatataagcctctggcaaac
actctcagagactattatggaaatcttgggacctcagttttgtttgcaac
caccattaagacaaattacacaaaacagagagctgaagctgatagttcta
tagttgtatccgatgcatgtaaaactgagaggagagcagagtgcagaagc
aaaacaaacacctgtgtgatggctgggaacagagtctagtaaacaattag
gaagctaaaatactcagagctggagagaattctggtttctcctattcccc
ccaacggacccagcttcattttcttctcagcctgagctgcaaacagctat
taatagccaggcttctggtaccagagagcttccctctgtgttgttgtgca
gcattgttttctaggaataaagtaaatcaatttctcttttgtctaaaacg
atggttctgagtgacttagtgttcagaaatttggatagattgtttttcta
aggatgagagaaatgagaattcaagttactcctaatacttacccttatgg
agtcgtaccatgctaaaagcaatttgacttcaagccactgtcacagggaa
ccatgagggctagtcagtattagcttcaggtcacacagtactgagatctt
ctgctttgggtttgggtcattagacattagacattagacattagacatct
tcgatagcatttgacctcacagaatgagtttggattcctcagattagaat
aacttttataagcaaatttcaatagcatacaaaatctccaaagcaaagag
cataaatgctggaaagaaaacattcaaattttagataaaccgtcccaaag
catctcacacgcactgaatgctaagccctctgggaaatctattttgaaaa
attctagtttgactttatctgagccaaagataaaatctttatgggataaa
tgtagaagctaatactttttaaaaaatgtctcttacccattatgcagcag
tcgcactgaccactgcaaggatcaggcttgagtagagtgacctgtatttg
atcaccccactgtgatgttctctcttccgctggactctga
tttctaaaagacaccagagaacattgtcctataagaggaggagaggaagg
aggaagaggaggagtaggaggagggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_117947040_117948192
seq2: B6Ng01-066B24.b_47_1186

seq1  GAATTCAATAGACTCCAAGCCCTCCCATTACTGGGGTACCCCAGAGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAGACTCCAAGCCCTCCCATTACTGGGGTACCCCAGAGCCAT  50

seq1  TTGCAATGTGTGCCTGTACAGAGTCTGCCTGATATAAGCCTCTGGCAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAATGTGTGCCTGTACAGAGTCTGCCTGATATAAGCCTCTGGCAAAC  100

seq1  ACTCTCAGAGACTATTATGGAAATCTTGGGACCTCAGTTTTGTTTGCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCAGAGACTATTATGGAAATCTTGGGACCTCAGTTTTGTTTGCAAC  150

seq1  CACCATTAAGACAAATTACACAAAACAGAGAGCTGAAGCTGATAGTTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTAAGACAAATTACACAAAACAGAGAGCTGAAGCTGATAGTTCTA  200

seq1  TAGTTGTATCCGATGCATGTAAAACTGAGAGGAGAGCAGAGTGCAGAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGTATCCGATGCATGTAAAACTGAGAGGAGAGCAGAGTGCAGAAGC  250

seq1  AAAACAAACACCTGTGTGATGGCTGGGAACAGAGTCTAGTAAACAATTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAACACCTGTGTGATGGCTGGGAACAGAGTCTAGTAAACAATTAG  300

seq1  GAAGCTAAAATACTCAGAGCTGGAGAGAATTCTGGTTTCTCCTATTCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTAAAATACTCAGAGCTGGAGAGAATTCTGGTTTCTCCTATTCCCC  350

seq1  CCAACGGACCCAGCTTCATTTTCTTCTCAGCCTGAGCTGCAAACAGCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACGGACCCAGCTTCATTTTCTTCTCAGCCTGAGCTGCAAACAGCTAT  400

seq1  TAATAGCCAGGCTTCTGGTACCAGAGAGCTTCCCTCTGTGTTGTTGTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCCAGGCTTCTGGTACCAGAGAGCTTCCCTCTGTGTTGTTGTGCA  450

seq1  GCATTGTTTTCTAGGAATAAAGTAAATCAATTTCTCTTTTGTCTAAAACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGTTTTCTAGGAATAAAGTAAATCAATTTCTCTTTTGTCTAAAACG  500

seq1  ATGGTTCTGAGTGACTTAGTGTTCAGAAATTTGGATAGATTGTTTTTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTCTGAGTGACTTAGTGTTCAGAAATTTGGATAGATTGTTTTTCTA  550

seq1  AGGATGAGAGAAATGAGAATTCAAGTTACTCCTAATACTTACCCTTATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGAGAGAAATGAGAATTCAAGTTACTCCTAATACTTACCCTTATGG  600

seq1  AGTCGTACCATGCTAAAAGCAATTTGACTTCAAGCCACTGTCACAGGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGTACCATGCTAAAAGCAATTTGACTTCAAGCCACTGTCACAGGGAA  650

seq1  CCATGAGGGCTAGTCAGTATTAGCTTCAGGTCACACAGTACTGAGATCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAGGGCTAGTCAGTATTAGCTTCAGGTCACACAGTACTGAGATCTT  700

seq1  CTGCTTTGGGTTTGGGTCATTAGACATTAGACATTAGACATTAGACATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTGGGTTTGGGTCATTAGACATTAGACATTAGACATTAGACATCT  750

seq1  TCGATAGCATTTGACCTCACAGAATGAGTTTGGATTCCTCAGATTAGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATAGCATTTGACCTCACAGAATGAGTTTGGATTCCTCAGATTAGAAT  800

seq1  AACTTTTATAAGCAAATTTCAATAGCATACAAAATCTCCAAAGCAAAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTATAAGCAAATTTCAATAGCATACAAAATCTCCAAAGCAAAGAG  850

seq1  CATAAATGCTGGAAAGAAAACATTCAAATTTTAGATAAACCGTCCCAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATGCTGGAAAGAAAACATTCAAATTTTAGATAAACCGTCCCAAAG  900

seq1  CATCTCACACGCACTGAATGCTAAGCCCTCTGGGAAAATCTATTTTGAAA  950
      |||||||||||||||||||||||||||||||||| |||||||||||| ||
seq2  CATCTCACACGCACTGAATGCTAAGCCCTCTGGG-AAATCTATTTTG-AA  948

seq1  AAATTCTAGTTTGACTTTATCTGAGCCAAAAGATAAAATCTTTATGGGAT  1000
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AAATTCTAGTTTGACTTTATCTGAGCC-AAAGATAAAATCTTTATGGGAT  997

seq1  AAATGTAGAAAGCTAAATACTTTTTAAAAAAATGTCTCTTACACATTATG  1050
      |||||||| ||||| |||||||||| |||||||||||||||| |||||||
seq2  AAATGTAG-AAGCT-AATACTTTTT-AAAAAATGTCTCTTACCCATTATG  1044

seq1  CAGCCAGTCGCACTGACCACTGCCAGGATTCGAGGCCTGGAGTAGAAGTT  1100
      ||| ||||||||||||||||||| |||||   ||| || |||||||   |
seq2  CAG-CAGTCGCACTGACCACTGCAAGGAT--CAGG-CTTGAGTAGA--GT  1088

seq1  GACCTGTATTTGATTCACCCACTGTTGATG-TCTCTCTTCCAGCTGGACT  1149
      ||||||||||||||   ||||||| ||||| |||||||||| ||||||||
seq2  GACCTGTATTTGATCACCCCACTG-TGATGTTCTCTCTTCC-GCTGGACT  1136

seq1  CTGA  1153
      ||||
seq2  CTGA  1140

seq1: chr7_124972257_124972312
seq2: B6Ng01-066B24.g_113_153 (reverse)

seq1  CTTCCCTCCTCCTACTCCTCCTCCTCCTCTCCTTTCTCTTCATCTTCCTC  50
      ||||||||||||||||||||||| |||||              |||||||
seq2  CTTCCCTCCTCCTACTCCTCCTCTTCCTC--------------CTTCCTC  36

seq1  TTCCTC  56
       |||||
seq2  -TCCTC  41