BAC Information

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BAC

Clone NameB6Ng01-066K19
Chromosome7 (Build37)
Map Location 108,359,030 - 108,488,266
singlet/doubletdoublet
Overlap geneFchsd2, Atg16l2, Stard10
Upstream genePgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, B930006L02Rik, LOC100041204, Tnfrsf19l, Arhgef17, P2ry6, P2ry2, LOC100049539, EG435996, EG622673
Downstream geneCentd2, Pde2a, Art2a, EG630138, Art2b, Clpb, Phox2a, Inppl1, Folr2, Folr1, 3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51, LOC667222, Numa1, Il18bp, Rnf121, Trpc2, Art5, Art1, Chrna10, Nup98, Frag1, Rhog, Stim1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066K19.bB6Ng01-066K19.g
ACCDH885787DH885788
length1,127863
definitionDH885787|Mus musculus domesticus DNA, BAC clone: B6Ng01-066K19, 5' end.DH885788|Mus musculus domesticus DNA, BAC clone: B6Ng01-066K19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,359,030 - 108,360,174)(108,487,409 - 108,488,266)
sequence
gaattccaagaataaaattgaagacctcattcattatttaagtggagttc
tagagttttaggaacattagtagtgaactgttcttgtcagaggcacagct
tctttccatagagcgaggaagccactcttacaaatggagtagagacagag
agtaaaaaaggacaaatgacacactcttcatttcacacaataaactgatt
tgattgacactgaaccaacatttataatttattacctaagttgcatactt
atatgatatgcttgactgcttatgacatattaactataaacaaaaatgat
gtaatttagagagtttttttggatttagtaacttgtttggaaaggtttga
gtaaagagagacctggaattattaccttcaaatcacttggttcatttctc
agaagtgtttatttctcaactacacatacttcctatatttaaaacagcac
ccagacaagaccacagaattagctggaaacacctgcgttcactaggccta
tagagtaagcaaaaaaaaaaaaaaaaggaaagacaaagatcatattttaa
aaatgcacatgaaagtctagtctctgacattgtagtattgatgatggaaa
gaattaggtgtgagtaaggcacaattcacaggcatggtgtcttcccattc
ccaggtcaccatgtatctgcttattccatggtgaaaccaactcaaaagta
ctttaaatcagaggtgggcaagaatgatgaatgacagatatggatgtcct
gcccagccagttcattcattctcagatttctggttagccttctgcagctt
cagaaatcttaccaaagctttttctatctgcattttatcggagtatattt
caacccctcaagtttcttcattattgcgtactctgtgctgatcttccata
tctaccaccaactttatcaggctgagagaacttttgagtagcctacaaaa
tggatgctatagtactgagagttgtaacttttaaaaaaaaggacatggca
aacagtttccttaaagacagatataataagtgaattttatgtttagttaa
aaaaattttttagatttattatttattaatagtacactgtgctgccttca
gaccacccgaaagctgtcagatcttgt
gaattcaagaatgaactccaacccatacctgtaagacatggctttgagga
agtcctttccctctgcctcgtttgcttttctagtccatgaaagtgtgtga
ctggatcccaccacctaactcgcagcccccagttccagctctgtgctgag
tctaaggaggcagaggtgaatgtgacgcctgggcttcctgtaacttccag
acaaggaaggtgacctaacatgcctgggagggctcagagcagcctggctc
ctcaggggccggtgtggagcagactgcctggagaagctcagtctaggaga
gggatgtttaccaagttcaggggcagtgaggaccaaggcccagagccaga
caagatcacagtttaccggctggctgagcctgtccacctggctcaagttt
ctgtgccatggcatgtgtagcctaacactcaaaaggttccaaatatgcta
gtaccaatggatgatttcagtctgagtcacagaaagtataggatgagcct
gggacatcttactgagctagaaaggaagtactcaaagaacaccttcatgg
gggagataccatgtaagcactgatcatactctttcctgcattctattagg
aaaggcactattgtaacttggcctagtaacattcaaaatcaaccagcttt
ctctactgtgaagttattcctcccacttcatgtgttttggaaccgggggc
ctttttgaatattaggctatgtacaccatgcccagaaacgcgctcagcaa
ctcagtacgccattgctgttgtctggctttggggccttgttcctgactgc
aggctctgccccctgtactttggatgcacatgcgtgtgcacatgtgtgaa
aaggccaggagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_108359030_108360174
seq2: B6Ng01-066K19.b_48_1174

seq1  GAATTCCAAGAATAAAATTGAAGACCTCATTCATTATTTAAGTGGAGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGAATAAAATTGAAGACCTCATTCATTATTTAAGTGGAGTTC  50

seq1  TAGAGTTTTAGGAACATTAGTAGTGAACTGTTCTTGTCAGAGGCACAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTTTTAGGAACATTAGTAGTGAACTGTTCTTGTCAGAGGCACAGCT  100

seq1  TCTTTCCATAGAGCGAGGAAGCCACTCTTACAAATGGAGTAGAGACAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCATAGAGCGAGGAAGCCACTCTTACAAATGGAGTAGAGACAGAG  150

seq1  AGTAAAAAAGGACAAATGACACACTCTTCATTTCACACAATAAACTGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAAAAGGACAAATGACACACTCTTCATTTCACACAATAAACTGATT  200

seq1  TGATTGACACTGAACCAACATTTATAATTTATTACCTAAGTTGCATACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGACACTGAACCAACATTTATAATTTATTACCTAAGTTGCATACTT  250

seq1  ATATGATATGCTTGACTGCTTATGACATATTAACTATAAACAAAAATGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATATGCTTGACTGCTTATGACATATTAACTATAAACAAAAATGAT  300

seq1  GTAATTTAGAGAGTTTTTTTGGATTTAGTAACTTGTTTGGAAAGGTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTAGAGAGTTTTTTTGGATTTAGTAACTTGTTTGGAAAGGTTTGA  350

seq1  GTAAAGAGAGACCTGGAATTATTACCTTCAAATCACTTGGTTCATTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGAGAGACCTGGAATTATTACCTTCAAATCACTTGGTTCATTTCTC  400

seq1  AGAAGTGTTTATTTCTCAACTACACATACTTCCTATATTTAAAACAGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGTTTATTTCTCAACTACACATACTTCCTATATTTAAAACAGCAC  450

seq1  CCAGACAAGACCACAGAATTAGCTGGAAACACCTGCGTTCACTAGGCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACAAGACCACAGAATTAGCTGGAAACACCTGCGTTCACTAGGCCTA  500

seq1  TAGAGTAAGCAAAAAAAAAAAAAAAAGGAAAGACAAAGATCATATTTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTAAGCAAAAAAAAAAAAAAAAGGAAAGACAAAGATCATATTTTAA  550

seq1  AAATGCACATGAAAGTCTAGTCTCTGACATTGTAGTATTGATGATGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCACATGAAAGTCTAGTCTCTGACATTGTAGTATTGATGATGGAAA  600

seq1  GAATTAGGTGTGAGTAAGGCACAATTCACAGGCATGGTGTCTTCCCATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAGGTGTGAGTAAGGCACAATTCACAGGCATGGTGTCTTCCCATTC  650

seq1  CCAGGTCACCATGTATCTGCTTATTCCATGGTGAAACCAACTCAAAAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTCACCATGTATCTGCTTATTCCATGGTGAAACCAACTCAAAAGTA  700

seq1  CTTTAAATCAGAGGTGGGCAAGAATGATGAATGACAGATATGGATGTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAATCAGAGGTGGGCAAGAATGATGAATGACAGATATGGATGTCCT  750

seq1  GCCCAGCCAGTTCATTCATTCTCAGATTTCTGGTTAGCCTTCTGCAGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGCCAGTTCATTCATTCTCAGATTTCTGGTTAGCCTTCTGCAGCTT  800

seq1  CAGAAATCTTACCAAAGCTTTTTCTATCTGCATTTTATCGGAGTATATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATCTTACCAAAGCTTTTTCTATCTGCATTTTATCGGAGTATATTT  850

seq1  CAACCCCTCAAGTTTCTTCATTATTGCGTACTCTGTGCTGATCTTCCATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCCTCAAGTTTCTTCATTATTGCGTACTCTGTGCTGATCTTCCATA  900

seq1  TCTACCACCAACTTTATCAAGGCTGAGAGAACTTTTGAGTAGCCTACAAA  950
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCTACCACCAACTTTATC-AGGCTGAGAGAACTTTTGAGTAGCCTACAAA  949

seq1  ATGGATGCTATAGTACTGAGAGTTGTAACTTTTAAAAAAAAAGGGACATG  1000
      |||||||||||||||||||||||||||||||||||||||||  |||||||
seq2  ATGGATGCTATAGTACTGAGAGTTGTAACTTTTAAAAAAAA--GGACATG  997

seq1  GCAAACAGGTTTCACTTAAGGACCAGATATAATAAGTGAATTTTATGTTT  1050
      ||||||| ||||| ||||| || |||||||||||||||||||||||||||
seq2  GCAAACA-GTTTC-CTTAAAGA-CAGATATAATAAGTGAATTTTATGTTT  1044

seq1  AGTTAAAAAAAATTTTTTTAAGATTTATTTATTTATTATATGTAAGTACA  1100
      |||||||||||   ||||| ||||||| |||||||||| ||   ||||||
seq2  AGTTAAAAAAA---TTTTTTAGATTTA-TTATTTATTA-AT---AGTACA  1086

seq1  CTGTAGCTGCCTTCAGACACTCCAGAAGAGGCTGTCAGATCTTGT  1145
      |||| ||||||||||||| | || ||  | |||||||||||||||
seq2  CTGT-GCTGCCTTCAGAC-CACCCGA--AAGCTGTCAGATCTTGT  1127

seq1: chr7_108487409_108488266
seq2: B6Ng01-066K19.g_68_930 (reverse)

seq1  AACTCCTGGCCTCTTACACACATGTGCACACGCATGTGCATCC-AAGTAC  49
      |||||||||||| || ||||||||||||||||||||||||||| ||||||
seq2  AACTCCTGGCCT-TTTCACACATGTGCACACGCATGTGCATCCAAAGTAC  49

seq1  A-GGGGCAGAGCCTGCAGTCAGGAACAAGG-CCCAAAGCCAGACAACAGC  97
      | |||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGGGGGCAGAGCCTGCAGTCAGGAACAAGGCCCCAAAGCCAGACAACAGC  99

seq1  -ATGGCGTACTGAGTTGCTGAGCGCGTTTCT-GGCATGGTGTACATAGCC  145
       |||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AATGGCGTACTGAGTTGCTGAGCGCGTTTCTGGGCATGGTGTACATAGCC  149

seq1  TAATATTC-AAAAGGCCCCCGGTTCC-AAACACATGAAGTGGGAGGAATA  193
      |||||||| ||||||||||||||||| |||||||||||||||||||||||
seq2  TAATATTCAAAAAGGCCCCCGGTTCCAAAACACATGAAGTGGGAGGAATA  199

seq1  ACTTCACAGTAGAGAAAGCTGGTTGATTTGTGAATGTTACTAGGCCAAGT  243
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ACTTCACAGTAGAGAAAGCTGGTTGATTT-TGAATGTTACTAGGCCAAGT  248

seq1  TACAATAGTGCCTTTCCTAATAGAATGCAGGAAAGAGTATGATCAGTGCT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATAGTGCCTTTCCTAATAGAATGCAGGAAAGAGTATGATCAGTGCT  298

seq1  TACATGGTATCTCCCCCATGAAGGTGTTCTTTGAGTACTTCCTTTCTAGC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGGTATCTCCCCCATGAAGGTGTTCTTTGAGTACTTCCTTTCTAGC  348

seq1  TCAGTAAGATGTCCCAGGCTCATCCTATACTTTCTGTGACTCAGACTGAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAAGATGTCCCAGGCTCATCCTATACTTTCTGTGACTCAGACTGAA  398

seq1  ATCATCCATTGGTACTAGCATATTTGGAACCTTTTGAGTGTTAGGCTACA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCCATTGGTACTAGCATATTTGGAACCTTTTGAGTGTTAGGCTACA  448

seq1  CATGCCATGGCACAGAAACTTGAGCCAGGTGGACAGGCTCAGCCAGCCGG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCATGGCACAGAAACTTGAGCCAGGTGGACAGGCTCAGCCAGCCGG  498

seq1  TAAACTGTGATCTTGTCTGGCTCTGGGCCTTGGTCCTCACTGCCCCTGAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTGTGATCTTGTCTGGCTCTGGGCCTTGGTCCTCACTGCCCCTGAA  548

seq1  CTTGGTAAACATCCCTCTCCTAGACTGAGCTTCTCCAGGCAGTCTGCTCC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTAAACATCCCTCTCCTAGACTGAGCTTCTCCAGGCAGTCTGCTCC  598

seq1  ACACCGGCCCCTGAGGAGCCAGGCTGCTCTGAGCCCTCCCAGGCATGTTA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCGGCCCCTGAGGAGCCAGGCTGCTCTGAGCCCTCCCAGGCATGTTA  648

seq1  GGTCACCTTCCTTGTCTGGAAGTTACAGGAAGCCCAGGCGTCACATTCAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACCTTCCTTGTCTGGAAGTTACAGGAAGCCCAGGCGTCACATTCAC  698

seq1  CTCTGCCTCCTTAGACTCAGCACAGAGCTGGAACTGGGGGCTGCGAGTTA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTCCTTAGACTCAGCACAGAGCTGGAACTGGGGGCTGCGAGTTA  748

seq1  GGTGGTGGGATCCAGTCACACACTTTCATGGACTAGAAAAGCAAACGAGG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGGGATCCAGTCACACACTTTCATGGACTAGAAAAGCAAACGAGG  798

seq1  CAGAGGGAAAGGACTTCCTCAAAGCCATGTCTTACAGGTATGGGTTGGAG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGAAAGGACTTCCTCAAAGCCATGTCTTACAGGTATGGGTTGGAG  848

seq1  TTCATTCTTGAATTC  858
      |||||||||||||||
seq2  TTCATTCTTGAATTC  863