BAC Information

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BAC

Clone NameB6Ng01-067J01
Chromosome7 (Build37)
Map Location 13,382,838 - 13,524,118
singlet/doubletdoublet
Overlap geneLOC100042515, Zfp329, Zfp110, Zfp128, Zscan22, Rps5, 2310014L17Rik
Upstream geneEG628898, V1rg5, V1rg6, LOC665999, V1rg4, LOC100042423, LOC628946, LOC100043075, LOC100042433, V1rg7, LOC100042437, V1rg3, LOC100042446, LOC100043092, V1rg9, V1rg12, V1rg8, V1rg11, Zfp551, EG666065, Zfp606, 2900092C05Rik, EG637908, EG666085, Vmn2r55, LOC629079, LOC629081, EG232875, LOC100043128
Downstream gene1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243, 9230107M04Rik, EG666256, LOC666267, LOC100042624, LOC100043194, Sult2a1, EG620627, EG434121
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067J01.bB6Ng01-067J01.g
ACCDH886415DH886416
length3371,003
definitionDH886415|Mus musculus domesticus DNA, BAC clone: B6Ng01-067J01, 5' end.DH886416|Mus musculus domesticus DNA, BAC clone: B6Ng01-067J01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,382,838 - 13,383,174)(13,523,109 - 13,524,118)
sequence
tccagtaataggcctctttcgactgagactgagacaagacttcttgttct
gttctgagtaccgccccaaaatcaaaggcgagcatcctggcttatccatt
ggtgatgttgcaaagaaactaggagagatgtggaacaacactgcagcaga
tgacaagcagccctatgagaagaaagctgccaagctgaaggagaagtatg
agaaggatattgctgcctacagagctaaaggaaaacctgatgcagcgaaa
aagggggtggtcaaggctgaaaagagcaagaaaaagaaggaagaggaaga
tgaggaggaggatgaagaggatgaggaagaggaggaa
gaattcaaacttgacctaagacatggcaggctccatatgatgacttgtgg
tgaggctgagttcatcagtagagtgcttgcctatcaccaaagggtcccaa
ggcaggggcagtctgagattggtgggaccagctgggcacactgagagaga
cccggcccctaagctctaccctagaaagccttgagttaatatctgggatt
gcatgtgagaatgttcagagggagacaaggaaggagacacaatccagtta
tctattgcatacatcacatggcaaactgaaaacaaaaatccggtgaccca
gttttggggcgaacggaacttcctatggggacaaggtagatagtctggtt
gactggggacaggtgcacggagcttatcaagtgaggtcatgagctctgtg
ctctttgagtatcatgtcatggtaaaagagacaatgggtaacaaaaaaaa
gctaccattctacctgggaataatgactgtcacattaataaacattgcca
gctctacaatgatggttccagctgatgcagtggtcagtgagtggacaatg
tccccccagccaaatgcagacaacgggccacatccatgagaagggtgtcg
tctgtatcccacttcaatactacttccttaacatcacaagacacctccca
gtcatagtctttcccctcccccaacacatttttattgattacttgggaat
tttatacaacacaccctaaacatgctcacttcctattcctcacacccttg
tgtcacccccacccccaaccccccaccccgcacaggcaaaaaatagaaaa
aaatacatcaagtccaatttttgttgcacatatactccctgggagcatgg
ccaaactcgcagtgagccctttccccccacacccaccccaaaagccataa
atgtgcagagctacacctcaacatctttatacagtttttttgttttttgg
tttttttttttggttagattgattttttttttgggattatgagacagggt
ttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_13382838_13383174
seq2: B6Ng01-067J01.b_54_390

seq1  TCCAGTAATAGGCCTCTTTCGACTGAGACTGAGACAAGACTTCTTGTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTAATAGGCCTCTTTCGACTGAGACTGAGACAAGACTTCTTGTTCT  50

seq1  GTTCTGAGTACCGCCCCAAAATCAAAGGCGAGCATCCTGGCTTATCCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAGTACCGCCCCAAAATCAAAGGCGAGCATCCTGGCTTATCCATT  100

seq1  GGTGATGTTGCAAAGAAACTAGGAGAGATGTGGAACAACACTGCAGCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATGTTGCAAAGAAACTAGGAGAGATGTGGAACAACACTGCAGCAGA  150

seq1  TGACAAGCAGCCCTATGAGAAGAAAGCTGCCAAGCTGAAGGAGAAGTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGCAGCCCTATGAGAAGAAAGCTGCCAAGCTGAAGGAGAAGTATG  200

seq1  AGAAGGATATTGCTGCCTACAGAGCTAAAGGAAAACCTGATGCAGCGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGATATTGCTGCCTACAGAGCTAAAGGAAAACCTGATGCAGCGAAA  250

seq1  AAGGGGGTGGTCAAGGCTGAAAAGAGCAAGAAAAAGAAGGAAGAGGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGGTGGTCAAGGCTGAAAAGAGCAAGAAAAAGAAGGAAGAGGAAGA  300

seq1  TGAGGAGGAGGATGAAGAGGATGAGGAAGAGGAGGAA  337
      |||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGGAGGATGAAGAGGATGAGGAAGAGGAGGAA  337

seq1: chr7_13523109_13524118
seq2: B6Ng01-067J01.g_67_1069 (reverse)

seq1  GAAACCCTGTCTCAAAAAACCAAAAAAAAAAAACAAAACAAAACAAAAAA  50
      |||||||||||||| ||  ||  ||||||||||  || | || |  ||||
seq2  GAAACCCTGTCTCATAATCCC--AAAAAAAAAATCAATCTAACC--AAAA  46

seq1  AAAAAAACAAAAAAACAAAAAAAAACTGTGATAAAGATGTTGAGGTGTAG  100
      |||||||| |||||||  ||||||||||| ||||||||||||||||||||
seq2  AAAAAAACCAAAAAAC--AAAAAAACTGT-ATAAAGATGTTGAGGTGTAG  93

seq1  CTCTGCACAATTTATGGCTTTTGGGGTGGGTGTGGGGGGAAAGGGCTCAC  150
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCAC-ATTTATGGCTTTTGGGGTGGGTGTGGGGGGAAAGGGCTCAC  142

seq1  TGCGAGTTTGGCCATGCT-CCAGGGAGTATATGTGCAACAAAAATTGGAC  199
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGCGAGTTTGGCCATGCTCCCAGGGAGTATATGTGCAACAAAAATTGGAC  192

seq1  TTGATGTATTTTTTTCTATTTTTTGCCTGTGCGGGGTGGGGGGTTGGGGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTATTTTTTTCTATTTTTTGCCTGTGCGGGGTGGGGGGTTGGGGG  242

seq1  TGGGGGTGACACAAGGGTGTGAGGAATAGGAAGTGAGCATGTTTAGGGTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGTGACACAAGGGTGTGAGGAATAGGAAGTGAGCATGTTTAGGGTG  292

seq1  TGTTGTATAAAATTCCCAAGTAATCAATAAAAATGTGTTGGGGGAGGGGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTATAAAATTCCCAAGTAATCAATAAAAATGTGTTGGGGGAGGGGA  342

seq1  AAGACTATGACTGGGAGGTGTCTTGTGATGTTAAGGAAGTAGTATTGAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTATGACTGGGAGGTGTCTTGTGATGTTAAGGAAGTAGTATTGAAG  392

seq1  TGGGATACAGACGACACCCTTCTCATGGATGTGGCCCGTTGTCTGCATTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATACAGACGACACCCTTCTCATGGATGTGGCCCGTTGTCTGCATTT  442

seq1  GGCTGGGGGGACATTGTCCACTCACTGACCACTGCATCAGCTGGAACCAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGGGGGACATTGTCCACTCACTGACCACTGCATCAGCTGGAACCAT  492

seq1  CATTGTAGAGCTGGCAATGTTTATTAATGTGACAGTCATTATTCCCAGGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTAGAGCTGGCAATGTTTATTAATGTGACAGTCATTATTCCCAGGT  542

seq1  AGAATGGTAGCTTTTTTTTGTTACCCATTGTCTCTTTTACCATGACATGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGTAGCTTTTTTTTGTTACCCATTGTCTCTTTTACCATGACATGA  592

seq1  TACTCAAAGAGCACAGAGCTCATGACCTCACTTGATAAGCTCCGTGCACC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAAAGAGCACAGAGCTCATGACCTCACTTGATAAGCTCCGTGCACC  642

seq1  TGTCCCCAGTCAACCAGACTATCTACCTTGTCCCCATAGGAAGTTCCGTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCAGTCAACCAGACTATCTACCTTGTCCCCATAGGAAGTTCCGTT  692

seq1  CGCCCCAAAACTGGGTCACCGGATTTTTGTTTTCAGTTTGCCATGTGATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCCAAAACTGGGTCACCGGATTTTTGTTTTCAGTTTGCCATGTGATG  742

seq1  TATGCAATAGATAACTGGATTGTGTCTCCTTCCTTGTCTCCCTCTGAACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAATAGATAACTGGATTGTGTCTCCTTCCTTGTCTCCCTCTGAACA  792

seq1  TTCTCACATGCAATCCCAGATATTAACTCAAGGCTTTCTAGGGTAGAGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACATGCAATCCCAGATATTAACTCAAGGCTTTCTAGGGTAGAGCT  842

seq1  TAGGGGCCGGGTCTCTCTCAGTGTGCCCAGCTGGTCCCACCAATCTCAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGCCGGGTCTCTCTCAGTGTGCCCAGCTGGTCCCACCAATCTCAGA  892

seq1  CTGCCCCTGCCTTGGGACCCTTTGGTGATAGGCAAGCACTCTACTGATGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCTGCCTTGGGACCCTTTGGTGATAGGCAAGCACTCTACTGATGA  942

seq1  ACTCAGCCTCACCACAAGTCATCATATGGAGCCTGCCATGTCTTAGGTCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCCTCACCACAAGTCATCATATGGAGCCTGCCATGTCTTAGGTCA  992

seq1  AGTTTGAATTC  1010
      |||||||||||
seq2  AGTTTGAATTC  1003