BAC Information

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BAC

Clone NameB6Ng01-068B10
Chromosome7 (Build37)
Map Location 107,605,033 - 107,606,003
singlet/doubletsinglet
Overlap geneAU020772
Upstream geneGdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1, EG245190, Slco2b1, Olfr520, Olfr521, Neu3, Spcs2, Xrra1, EG330602, Chrdl2, Pold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3, Ppme1
Downstream geneUcp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, B930006L02Rik, LOC100041204, Tnfrsf19l, Arhgef17, P2ry6, P2ry2, LOC100049539, EG435996, Fchsd2, EG622673, Atg16l2, Stard10, Centd2, Pde2a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068B10.bB6Ng01-068B10.g
ACCDH886780DH886781
length9691,168
definitionDH886780|Mus musculus domesticus DNA, BAC clone: B6Ng01-068B10, 5' end.DH886781|Mus musculus domesticus DNA, BAC clone: B6Ng01-068B10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaatatagcctttctgagcccgttctcagttctcagccaggaag
aagcgatctctaccccaccatacttacaagctcctcgggtcaatgtcttt
tttttccctgttcactctaatctaccattgcagcatagaaaccattaata
cagattaaactgaagtgtcctatttccataagatagaatcgaatgaatgg
aaacatttgtataaatcattaattcacgtttgtatgcgtgtggtatattc
atcgtatatgtccatgtgtatgcacactgagcatgctcactgcatgtctg
tgctggtgcatgtgggggctagaacctccgtgttcttcaccctatccttt
gagacagggtcttgcgctcagcctggaacttaccaattcagcagaactgc
tcggggacccttctgtctctgtctcctcagcactaggactacaagcaggt
ggcaccatatctgactttttatttaggtgctggggttccaaactcaggtc
ctgcacagtgagcactttaccaactgagccatacccctaaccccacacac
acgtcattcatgatacagatcagagaaaaacataaggactgtggtaggga
tggagaagggcctgtggctgggttctaggccctcccagcaggccacctct
gggtgaagttgctccccagacttatgtggggcgaatcacctaacactgct
gctgtcagtgtagttatatgtcagattgctgtcaggaaaagagctgccac
atgtgcccaggccctcaggctgcttgagctcaggccgtccatcctcacca
agagaacgttcttgcattgagtaccaaggacaggttagaataatccctac
ctccagctcccatcatctggtaaaagtcaggcaaacaggcagttgctcca
agtactttggtgagagatgggagcaggaagtggggactttaggctgctca
gtacaggaagtgatgtgag
gaattctcacctgaggaatactgaatggctgagaaacacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggttaagataaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctcaattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatggtactactggaggatcctgtaatacctctcctgggc
atttatccagaagatgttccaactagtaagaaacatgctccactatgttc
atagcagccttatttataatagccagaagctggaaagaacccagatgccc
ctcaacagaggaatggatacaaaaaatgtggtacatttacacaatggaat
actactcagctattaaaaagaatgaatttatgaaattcctaggcaaatgg
ttggacctggagggcattatcctgagtgaggtaacccaatcacaaaagaa
ctcaaatgatatgtactcactgataagtggatattagcccagaaacttag
gatacccaagatataagatagaatttgcaaaacacatgaaactcaagaag
aacgaagaccaaagtgtggacactttgccccttcttagaattgggaacaa
aacacccatggaaggaattacagagacaaagtttggagctaagacaaagg
atggaccatctagagactgccatatccagggatccatcccataatcagcc
tccaaacgctgacaccactgcatacactagcaagattttgctgaaaggac
cctgatatagctgtctcttgtgagactacgccagggcctagcaaacactt
aagtggatgctcacaatcagctattggatggattacagggccccaatgga
ggagctagagaaaatacccaaggagctaaagggatctgcaaccttatagt
tgacaacattatgaactaaccatacccggagctcttgactctagctgcat
atgtatcaaagatggcctagtcagcatcctggaaagagagccattggact
tgcatcttaattgccgagttcaggaacctcgggcaaaattgggagtgggt
gtgagttaggggatgcgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_107605033_107606003
seq2: B6Ng01-068B10.b_47_1015

seq1  GAATTCAAATATAGCCTTTCTGAGCCAGTTCTCAGTTCTCAGCCAGGAAG  50
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GAATTCAAATATAGCCTTTCTGAGCCCGTTCTCAGTTCTCAGCCAGGAAG  50

seq1  AAGCGATCTCTACCCCACCATACTTACAAGCTCCTCGGGTCAATGTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGATCTCTACCCCACCATACTTACAAGCTCCTCGGGTCAATGTCTTT  100

seq1  TTTTTCCCTGTTCACTCTAATCTACCATTGCAGCATAGAAACCATTAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCCTGTTCACTCTAATCTACCATTGCAGCATAGAAACCATTAATA  150

seq1  CAGATTAAACTGAAGTGTCCTATTTCCATAAGATAGAATCGAATGAATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTAAACTGAAGTGTCCTATTTCCATAAGATAGAATCGAATGAATGG  200

seq1  AAACATTTGTATAAATCATTAATTCACGTTTGTATGCGTGTGGTATATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTTGTATAAATCATTAATTCACGTTTGTATGCGTGTGGTATATTC  250

seq1  ATCGTATATGTCCATGTGTATGCACACTGAGCATGCTCACTGCATGTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTATATGTCCATGTGTATGCACACTGAGCATGCTCACTGCATGTCTG  300

seq1  TGCTGGTGCATGTGGGGGCTAGAACCTCCGTGTTCTTCACCCTATCCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTGCATGTGGGGGCTAGAACCTCCGTGTTCTTCACCCTATCCTTT  350

seq1  GAGACAGGGTCTTGCGCTCAGCCTGGAACTTACCAATTCAGCAGAACTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGGGTCTTGCGCTCAGCCTGGAACTTACCAATTCAGCAGAACTGC  400

seq1  TCGGGGACCCTTCTGTCTCTGTCTCCTCAGCACTAGGACTACAAGCAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGGACCCTTCTGTCTCTGTCTCCTCAGCACTAGGACTACAAGCAGGT  450

seq1  GGCACCATATCTGACTTTTTATTTAGGTGCTGGGGTTCCAAACTCAGGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCATATCTGACTTTTTATTTAGGTGCTGGGGTTCCAAACTCAGGTC  500

seq1  CTGCACAGTGAGCACTTTACCAACTGAGCCATACCCCTAACCCCACACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACAGTGAGCACTTTACCAACTGAGCCATACCCCTAACCCCACACAC  550

seq1  ACGTCATTCATGATACAGATCAGAGAAAAACATAAGGACTGTGGTAGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCATTCATGATACAGATCAGAGAAAAACATAAGGACTGTGGTAGGGA  600

seq1  TGGAGAAGGGCCTGTGGCTGGGTTCTAGGCCCTCCCAGCAGGCCACCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAGGGCCTGTGGCTGGGTTCTAGGCCCTCCCAGCAGGCCACCTCT  650

seq1  GGGTGAAGTTGCTCCCCAGACTTATGTGGGGCGAATCACCTAACACTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGAAGTTGCTCCCCAGACTTATGTGGGGCGAATCACCTAACACTGCT  700

seq1  GCTGTCAGTGTAGTTATATGTCAGATTGCTGTCAGGAAAAGAGCTGCCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCAGTGTAGTTATATGTCAGATTGCTGTCAGGAAAAGAGCTGCCAC  750

seq1  ATGTGCCCAGGCCCTCAGGCTGCTTGAGCTCAGGCCGTCCATCCTCACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCCCAGGCCCTCAGGCTGCTTGAGCTCAGGCCGTCCATCCTCACCA  800

seq1  AGAGAACGTTCTTGCATTGAGTACCAAGGACAGGTTAGAATTAATCCCTA  850
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGAGAACGTTCTTGCATTGAGTACCAAGGACAGGTTAGAA-TAATCCCTA  849

seq1  CCTCCAGCTCCCATCATCTGGTAAAAGTCAGGCAAACAGGCAGTTGCTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGCTCCCATCATCTGGTAAAAGTCAGGCAAACAGGCAGTTGCTCC  899

seq1  AAGTACTTTGGTGAGAGATGGGAGCAGGAAGTGGGGACTTTAGGCTGCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACTTTGGTGAGAGATGGGAGCAGGAAGTGGGGACTTTAGGCTGCTC  949

seq1  AGTATCAGGGAGTGATGTGAG  971
      |||| |||| |||||||||||
seq2  AGTA-CAGGAAGTGATGTGAG  969