BAC Information

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BAC

Clone NameB6Ng01-073D01
Chromosome7 (Build37)
Map Location 134,400,060 - 134,549,053
singlet/doubletdoublet
Overlap gene2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764
Upstream geneSbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771
Downstream geneZfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073D01.bB6Ng01-073D01.g
ACCDH890394DH890395
length1,0851,061
definitionDH890394|Mus musculus domesticus DNA, BAC clone: B6Ng01-073D01, 5' end.DH890395|Mus musculus domesticus DNA, BAC clone: B6Ng01-073D01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,400,060 - 134,401,138)(134,547,993 - 134,549,053)
sequence
gaattcttttacctggggaggcacgaagggtcatcagaggaggcagacaa
ttaactcgtcaatagcactggtttctctgcaggacctcgctttttgggag
gcagtcttaggtgttgtcgggacataatgtgcccacacaccacataaact
gtgcattcaacaccatctgactgtaaagaaggaacagaaattggccctgg
ccagggaagagaggcaggcggtctttacttgtacaaaggggccaaggaaa
ggaagctgtacccaagacttgtggcccatacttacttcctactctcttct
gcaagttttaagttgaaaaggcaaaacagcaactgttagttacactggac
agtaccccacttctctgcaggatttgagatattctgtctagctactcaag
aaaaatcgagatgtttttgccttaagtcattttattgagagagaaaacac
ttgggcccagacttaataaggccagattagcacctcgtttttatgtggaa
gcctggtctctcagctccgaggcagggtctccagcccccacagcctggtt
ttcagagatggtcccacggggcaagtcagtgtacttgcaggcagaacctc
gggacaggtggactgggtaacgttggcggttggtgtccattttggagatt
actgcttgaggtaaatccacatggcagcgggctgctaatgctaccaggta
gatgaggacgtcgctaagctcctcctgaagggctgctctctcctttggtg
gccatgcttgaggaccaggctctgtatcagacttccactggctagagaga
gaacaggacagacacataagccttgctagtttagtgggcctgtctatagc
ttcaaaccaccacagctcagaaaatccctccaagaacaatgtactcgccc
aggcccctgggttgagccaggtgggaaagagatttttttttctttctttt
agacagggttttctctgtgtagccctgtctatcctggaacttacttctgt
tactaggctggtctcgaacctcagaaattcatctgatctgccttcccagt
ggctgggattaaaggcgttgcgccacccacgcccg
gaattcaagccacggtcctaagggcagacaagcgtcacgggtgccatttg
tgtgggaagagttttgcccagcggcccacattggtggagcacctgtacac
tcacacaggtgaaaagccgtttcagtgcccagactgcaacaaatgcttcg
gccgggcttcttccctgaccatgcaccgagccatacaccgaggggaacgg
ccgcatcagtgtcctgactgtgggaagagttttacccagcggtccacatt
ggtggcacacatgtatactcacacaggtgaaaaaccattttgttgccccg
actgcaacaaatccttcagccggtcttcttccctgagctctcaccgggcc
atacacagaggggaacggcctcattgttgccctgactgtggccgagcctt
cacacgtcgctctggcctcattgcccatctccgtatccacactggggaga
agccttactgttgtgctgattgtggacgctgcttcagccagagatctgcg
ttccgtgagcaccagcgggtggtacacagtggtgtgacccccttcacttg
cactcactgtggcagagcctttgcggattccaaatatcttcggcgccaca
tgcgcatccatacaggtgaaaagccttattcatgccctgattgtggtcgc
tgctttcgccagagctctgaaattccagcccataggaggacccacactgg
cgagcgttccttacccctgccctcaatgtggcaggcagtttcgcacaaag
tcagctatgacaagccaccagtgggtccatagaccaggagcttaaaggcc
ataatgacaaaaaagcccgtcagttatctatatccctggaccctagacaa
gaggacccggatccacctgtgggcttctagcattacccagagtattcaga
aagtgtgggtgatggtcttaaaggcgtcacatagaagggtgagtatgtac
attgttgagttcagagggttgacctatgtcatcttccggaagtccacaga
cgttctagggtactgctggtctggcaccgggtcagtcttttgggtgatat
ttctaagatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_134400060_134401138
seq2: B6Ng01-073D01.b_44_1128

seq1  GAATTCTTTTACCTGGGGAGGCACGAAGGGTCATCAGAGGAGGCAGACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTACCTGGGGAGGCACGAAGGGTCATCAGAGGAGGCAGACAA  50

seq1  TTAACTCGTCAATAGCACTGGTTTCTCTGCAGGACCTCGCTTTTTGGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTCGTCAATAGCACTGGTTTCTCTGCAGGACCTCGCTTTTTGGGAG  100

seq1  GCAGTCTTAGGTGTTGTCGGGACATAATGTGCCCACACACCACATAAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCTTAGGTGTTGTCGGGACATAATGTGCCCACACACCACATAAACT  150

seq1  GTGCATTCAACACCATCTGACTGTAAAGAAGGAACAGAAATTGGCCCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATTCAACACCATCTGACTGTAAAGAAGGAACAGAAATTGGCCCTGG  200

seq1  CCAGGGAAGAGAGGCAGGCGGTCTTTACTTGTACAAAGGGGCCAAGGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGAAGAGAGGCAGGCGGTCTTTACTTGTACAAAGGGGCCAAGGAAA  250

seq1  GGAAGCTGTACCCAAGACTTGTGGCCCATACTTACTTCCTACTCTCTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCTGTACCCAAGACTTGTGGCCCATACTTACTTCCTACTCTCTTCT  300

seq1  GCAAGTTTTAAGTTGAAAAGGCAAAACAGCAACTGTTAGTTACACTGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTTTAAGTTGAAAAGGCAAAACAGCAACTGTTAGTTACACTGGAC  350

seq1  AGTACCCCACTTCTCTGCAGGATTTGAGATATTCTGTCTAGCTACTCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCCCACTTCTCTGCAGGATTTGAGATATTCTGTCTAGCTACTCAAG  400

seq1  AAAAATCGAGATGTTTTTGCCTTAAGTCATTTTATTGAGAGAGAAAACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCGAGATGTTTTTGCCTTAAGTCATTTTATTGAGAGAGAAAACAC  450

seq1  TTGGGCCCAGACTTAATAAGGCCAGATTAGCACCTCGTTTTTATGTGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCCCAGACTTAATAAGGCCAGATTAGCACCTCGTTTTTATGTGGAA  500

seq1  GCCTGGTCTCTCAGCTCCGAGGCAGGGTCTCCAGCCCCCACAGCCTGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTCTCTCAGCTCCGAGGCAGGGTCTCCAGCCCCCACAGCCTGGTT  550

seq1  TTCAGAGATGGTCCCACGGGGCAAGTCAGTGTACTTGCAGGCAGAACCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGATGGTCCCACGGGGCAAGTCAGTGTACTTGCAGGCAGAACCTC  600

seq1  GGGACAGGTGGACTGGGTAACGTTGGCGGTTGGTGTCCATTTTGGAGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAGGTGGACTGGGTAACGTTGGCGGTTGGTGTCCATTTTGGAGATT  650

seq1  ACTGCTTGAGGTAAATCCACATGGCAGCGGGCTGCTAATGCTACCAGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTGAGGTAAATCCACATGGCAGCGGGCTGCTAATGCTACCAGGTA  700

seq1  GATGAGGACGTCGCTAAGCTCCTCCTGAAGGGCTGCTCTCTCCTTTGGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGGACGTCGCTAAGCTCCTCCTGAAGGGCTGCTCTCTCCTTTGGTG  750

seq1  GCCATGCTTGAGGACCAGGCTCTGTATCAGACTTCCACTGGCTAGAGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGCTTGAGGACCAGGCTCTGTATCAGACTTCCACTGGCTAGAGAGA  800

seq1  GAACAGGACAGACACATAAGCC-TGCTAGTTTAGTGGGCCTGTCTATAGC  849
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GAACAGGACAGACACATAAGCCTTGCTAGTTTAGTGGGCCTGTCTATAGC  850

seq1  TTCAAACCACCACAGCTCAGAAAATCCCTCCAAGAACAATGTACTCGCCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACCACCACAGCTCAGAAAATCCCTCCAAGAACAATGTACTCGCCC  900

seq1  AGG-CCCTGGGTAGAGCCAGGTGGGAAAGAGATTTTTTTTTCTTTCTTTG  948
      ||| |||||||| |||||||||||||||||||||||||||||||||||| 
seq2  AGGCCCCTGGGTTGAGCCAGGTGGGAAAGAGATTTTTTTTTCTTTCTTTT  950

seq1  AGACAGGG-TTTCTCTGTGTAGCCCTGTCTATCCTGGAACTCAC-TCTGT  996
      |||||||| |||||||||||||||||||||||||||||||| || |||||
seq2  AGACAGGGTTTTCTCTGTGTAGCCCTGTCTATCCTGGAACTTACTTCTGT  1000

seq1  AGACTAGGCTGGTCTCGAA-CTCAGAAATTCACCTGACTCTGCCTCCCAA  1045
        ||||||||||||||||| |||||||||||| |||| ||||||| || |
seq2  -TACTAGGCTGGTCTCGAACCTCAGAAATTCATCTGA-TCTGCCTTCCCA  1048

seq1  GT-GCTGGGATTAAAGGCG-TGCGCCA-CCACGCCCG  1079
      || |||||||||||||||| ||||||| |||||||||
seq2  GTGGCTGGGATTAAAGGCGTTGCGCCACCCACGCCCG  1085

seq1: chr7_134547993_134549053
seq2: B6Ng01-073D01.g_67_1127 (reverse)

seq1  GCATC-TAGAA--ATCACCAAAAAGACTGTACCCGGTGCCCAGACCAGCA  47
      ||||| |||||  |||||| ||||||||| |||||||| |||||||||||
seq2  GCATCTTAGAAATATCACCCAAAAGACTG-ACCCGGTG-CCAGACCAGCA  48

seq1  GTA-CCTAGAACGTCTGT-GACTTCCGGAAGATGACATAGGTTCAACCCT  95
      ||| |||||||||||||| |||||||||||||||||||||| ||||||||
seq2  GTACCCTAGAACGTCTGTGGACTTCCGGAAGATGACATAGG-TCAACCCT  97

seq1  CTGGACCTCAAACAATGTACATATCTCACCC-TCTATGTTGACGCCTTTA  144
      || || ||| ||||||||||||| ||||||| |||||| |||||||||||
seq2  CT-GAACTC-AACAATGTACATA-CTCACCCTTCTATG-TGACGCCTTTA  143

seq1  AGACCATCACCCACACTTTCTGAATATCTCTGGGTAATGCTAGAAGCCCA  194
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGACCATCACCCACACTTTCTGAATA-CTCTGGGTAATGCTAGAAGCCCA  192

seq1  CAGGTGGATCCGGGTCCTCTTGTCTAGGGTCCAGGGATATAGATAACTGA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGATCCGGGTCCTCTTGTCTAGGGTCCAGGGATATAGATAACTGA  242

seq1  CGGGCTTTTTTGTCCTTATGGCCTTT-AGCTCCTGGTCTATGGACCCACT  293
      |||||||||||||| ||||||||||| |||||||||||||||||||||||
seq2  CGGGCTTTTTTGTCATTATGGCCTTTAAGCTCCTGGTCTATGGACCCACT  292

seq1  GGTGGCTTGTCATAGCTGACTTTGTGCGAAACTGCCTGCCACATTGAGGG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTTGTCATAGCTGACTTTGTGCGAAACTGCCTGCCACATTGAGGG  342

seq1  CAGGGGTAAGG-ACGCTCGCCAGTGTGGGTCCTCCTATGGGCTGGAATTT  392
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGTAAGGAACGCTCGCCAGTGTGGGTCCTCCTATGGGCTGGAATTT  392

seq1  CAGAGCTCTGGCGAAAGCAGCGACCACAATCAGGGCATGAATAAGGCTTT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTCTGGCGAAAGCAGCGACCACAATCAGGGCATGAATAAGGCTTT  442

seq1  TCACCTGTATGGATGCGCATGTGGCGCCGAAGATATTTGGAATCCGCAAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGTATGGATGCGCATGTGGCGCCGAAGATATTTGGAATCCGCAAA  492

seq1  GGCTCTGCCACAGTGAGTGCAAGTGAAGGGGGTCACACCACTGTGTACCA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGCCACAGTGAGTGCAAGTGAAGGGGGTCACACCACTGTGTACCA  542

seq1  CCCGCTGGTGCTCACGGAACGCAGATCTCTGGCTGAAGCAGCGTCCACAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCTGGTGCTCACGGAACGCAGATCTCTGGCTGAAGCAGCGTCCACAA  592

seq1  TCAGCACAACAGTAAGGCTTCTCCCCAGTGTGGATACGGAGATGGGCAAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCACAACAGTAAGGCTTCTCCCCAGTGTGGATACGGAGATGGGCAAT  642

seq1  GAGGCCAGAGCGACGTGTGAAGGCTCGGCCACAGTCAGGGCAACAATGAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCAGAGCGACGTGTGAAGGCTCGGCCACAGTCAGGGCAACAATGAG  692

seq1  GCCGTTCCCCTCTGTGTATGGCCCGGTGAGAGCTCAGGGAAGAAGACCGG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTTCCCCTCTGTGTATGGCCCGGTGAGAGCTCAGGGAAGAAGACCGG  742

seq1  CTGAAGGATTTGTTGCAGTCGGGGCAACAAAATGGTTTTTCACCTGTGTG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGATTTGTTGCAGTCGGGGCAACAAAATGGTTTTTCACCTGTGTG  792

seq1  AGTATACATGTGTGCCACCAATGTGGACCGCTGGGTAAAACTCTTCCCAC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATACATGTGTGCCACCAATGTGGACCGCTGGGTAAAACTCTTCCCAC  842

seq1  AGTCAGGACACTGATGCGGCCGTTCCCCTCGGTGTATGGCTCGGTGCATG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGACACTGATGCGGCCGTTCCCCTCGGTGTATGGCTCGGTGCATG  892

seq1  GTCAGGGAAGAAGCCCGGCCGAAGCATTTGTTGCAGTCTGGGCACTGAAA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGGAAGAAGCCCGGCCGAAGCATTTGTTGCAGTCTGGGCACTGAAA  942

seq1  CGGCTTTTCACCTGTGTGAGTGTACAGGTGCTCCACCAATGTGGGCCGCT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTTTTCACCTGTGTGAGTGTACAGGTGCTCCACCAATGTGGGCCGCT  992

seq1  GGGCAAAACTCTTCCCACACAAATGGCACCCGTGACGCTTGTCTGCCCTT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAAACTCTTCCCACACAAATGGCACCCGTGACGCTTGTCTGCCCTT  1042

seq1  AGGACCGTGGCTTGAATTC  1061
      |||||||||||||||||||
seq2  AGGACCGTGGCTTGAATTC  1061