BAC Information

Click to search

BAC

Clone NameB6Ng01-073M19
Chromosome7 (Build37)
Map Location 112,172,361 - 112,173,453
singlet/doubletsinglet
Overlap geneOlfr675
Upstream geneOlfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1
Downstream geneOlfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073M19.bB6Ng01-073M19.g
ACCDH890822DH890823
length1,2711,089
definitionDH890822|Mus musculus domesticus DNA, BAC clone: B6Ng01-073M19, 5' end.DH890823|Mus musculus domesticus DNA, BAC clone: B6Ng01-073M19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaataaaaaattaacaatttggttattaactatgaggcaaactt
taccaacagaatataaaagataggggagagaaagcaatctagctgctgaa
gacatgaacactggtcagttcattttatgagactacaggtaccctgatac
ccaaacaacacacagactcaacaaataaagagaattagagaccaatttat
cttatgaacataggtgcaaaagtacttaataaaatgcttgaaaacataat
ccaagaatatatcaaaaagatcatccaccatgatcaagtagacttcatcc
caaagatatagagatggttcaatatattatatattatatatcaataaacg
ttttccaacatataaacaaactggaaggaaaaaatctgacatgatcttct
cattagatgcagaaaaggcctttgacaaatatcccttcatgataaaagtc
ttggagagattaaggatacaaaggatatacctcatcataattaaggcaga
ctgcagcaagcctatagccaacatcaacttaaatggagagaaactcaaaa
taactccactaaaatcaggaccaagacaaagttgtcccctttctccatat
ttatttaatatagtacttgaagtacttagctagagcagtaagacaactga
agaaaatcaattgtatacacactggaaaggaaaaagtcaaattctcatta
tttgcagatgatataatagtatacataaatgaccctaaaaatttccccag
aggactcctacagcttacaaacactgagcaatgtagctggatacaaaatt
aactcacaaaaatcagtaggccacctatatacaaatggcaaatggactaa
gaaaaaagtagggaagtaacacctttcatagtaacctcaaataatataaa
atgtcttggggctaattttaaccaagcaagtgaaagacttgtatcataaa
acttcaagtcattaaagagacatcagaaaatggaaagatctcccatgatc
atggattaataggattagcatagttaaaatggccatcctaccaaagtatt
ctacatattaattgtatttcatccaaattccaccccattctcacagattt
aaggacaattctccacctgcaattgaaattcaagaaccaggatatctaaa
caatattcaatttataagaactggctggtaagttctacatcctgatcagc
tatctcaagagtcttacagtagatgaagcacgcatgatattaactcttaa
tcacgaaccatttgtggcaca
gaattccaatattccccgtactaccttgaaatataaagcatttgattcac
agttaaataatatttttggtcacagtaagtttgtctctttcccagttttc
tatgtactacacacaaaataactactttcaataacatttgagacaaatac
tggaacaaactttgcaaagtgctattggctagtgatctttacggaacaaa
atcctcattacttgctcccgaatttgcttggtccttaccccatagatcac
aggattaagggcaggtgggacaaccacataaagattggccaagaaaatgt
ggatacattggggcacattgtggccaaaacgatgtgtcaagaaggagaaa
aatgctggagtaaaaaaggttaagataacacctatatgagagccacaagt
attgagagccttgagcctggcctcccgggagggcaggcagaacactgcat
agaggatcctgacataggagagaataataagaactacatccaggagcaag
agagcaatgttgctaagaccaaacatgatgttgactttgatgctggcaca
agctagacgggcgatgcccatgtgttcacagtaagtatgaggaatgatgt
gatggccacagtagggtagcctcaagaggagaaacactactggaagaacc
atgtataggctcctcagcacagcaatacctgcaatgaccccaatgacttt
gttggttagaatgacagtatattgaaggggcttacaaatggcaacgtagc
ggtcaaagcccatggccaacaacataatgctttccatgaccgtgaagaag
tggatgaagaacatctgagaaaggcaacctccaaaagatatttccctgag
attgaaccagaagatgcccagcattttggggatggtggctgtggtcagtc
ccaggtcaatggaatccagcatggctaggaagtagtacatgggctcatga
agatgtgttcagttggatccacaaataaaaagcagcatttcccagattgc
aatgagaatagaggaaacaaaagggaaatccagtccagatgggtgcatat
tctagcctgggatgccagcagaggaacgaaagaaggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_112172361_112173453
seq2: B6Ng01-073M19.g_70_1158

seq1  GAATTCCAATATTCCCCGTACTACCTTGAAATATAAAGCATTTGATTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATATTCCCCGTACTACCTTGAAATATAAAGCATTTGATTCAC  50

seq1  AGTTAAATAATATTTTTGGTCACAGTAAGTTTGTCTCTTTCCCAGTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAATAATATTTTTGGTCACAGTAAGTTTGTCTCTTTCCCAGTTTTC  100

seq1  TATGTACTACACACAAAATAACTACTTTCAATAACATTTGAGACAAATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTACTACACACAAAATAACTACTTTCAATAACATTTGAGACAAATAC  150

seq1  TGGAACAAACTTTGCAAAGTGCTATTGGCTAGTGATCTTTACGGAACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACAAACTTTGCAAAGTGCTATTGGCTAGTGATCTTTACGGAACAAA  200

seq1  ATCCTCATTACTTGCTCCCGAATTTGCTTGGTCCTTACCCCATAGATCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCATTACTTGCTCCCGAATTTGCTTGGTCCTTACCCCATAGATCAC  250

seq1  AGGATTAAGGGCAGGTGGGACAACCACATAAAGATTGGCCAAGAAAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTAAGGGCAGGTGGGACAACCACATAAAGATTGGCCAAGAAAATGT  300

seq1  GGATACATTGGGGCACATTGTGGCCAAAACGATGTGTCAAGAAGGAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACATTGGGGCACATTGTGGCCAAAACGATGTGTCAAGAAGGAGAAA  350

seq1  AATGCTGGAGTAAAAAAGGTTAAGATAACACCTATATGAGAGCCACAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGGAGTAAAAAAGGTTAAGATAACACCTATATGAGAGCCACAAGT  400

seq1  ATTGAGAGCCTTGAGCCTGGCCTCCCGGGAGGGCAGGCAGAACACTGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAGCCTTGAGCCTGGCCTCCCGGGAGGGCAGGCAGAACACTGCAT  450

seq1  AGAGGATCCTGACATAGGAGAGAATAATAAGAACTACATCCAGGAGCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGATCCTGACATAGGAGAGAATAATAAGAACTACATCCAGGAGCAAG  500

seq1  AGAGCAATGTTGCTAAGACCAAACATGATGTTGACTTTGATGCTGGCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAATGTTGCTAAGACCAAACATGATGTTGACTTTGATGCTGGCACA  550

seq1  AGCTAGACGGGCGATGCCCATGTGTTCACAGTAAGTATGAGGAATGATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGACGGGCGATGCCCATGTGTTCACAGTAAGTATGAGGAATGATGT  600

seq1  GATGGCCACAGTAGGGTAGCCTCAAGAGGAGAAACACTACTGGAAGAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCCACAGTAGGGTAGCCTCAAGAGGAGAAACACTACTGGAAGAACC  650

seq1  ATGTATAGGCTCCTCAGCACAGCAATACCTGCAATGACCCCAATGACTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATAGGCTCCTCAGCACAGCAATACCTGCAATGACCCCAATGACTTT  700

seq1  GTTGGTTAGAATGACAGTATATTGAAGGGGCTTACAAATGGCAACGTAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTTAGAATGACAGTATATTGAAGGGGCTTACAAATGGCAACGTAGC  750

seq1  GGTCAAAGCCCATGGCCAACAACATAATGCTTTCCATGACCGTGAAGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAAGCCCATGGCCAACAACATAATGCTTTCCATGACCGTGAAGAAG  800

seq1  TGGATGAAGAACATCTGAGAAAGGCAACCTCCAAAAGATATTTCCCTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGAAGAACATCTGAGAAAGGCAACCTCCAAAAGATATTTCCCTGAG  850

seq1  ATTGAACCAGAAGATGCCCAGCATTTTGGGGATGGTGGCTGTGGTCAGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACCAGAAGATGCCCAGCATTTTGGGGATGGTGGCTGTGGTCAGTC  900

seq1  CCAGGTCAATGGAATCCAGCATGGCTAGGAAGTAGTACATGGGCTCATGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTCAATGGAATCCAGCATGGCTAGGAAGTAGTACATGGGCTCATGA  950

seq1  AGACTGTGTTCAGTTTGGAT-CACAAATAAAACAGCAGCATTTCCCAGAA  999
      ||| ||||||||| |||||| ||||||||||| ||||||||||||||| |
seq2  AGA-TGTGTTCAG-TTGGATCCACAAATAAAA-AGCAGCATTTCCCAG-A  996

seq1  TTGCAATGAG-ATAGAGAAAACAAAAGGGAAATCCAATCCAGATGTGTGC  1048
      |||||||||| |||||| |||||||||||||||||| |||||||| ||||
seq2  TTGCAATGAGAATAGAGGAAACAAAAGGGAAATCCAGTCCAGATGGGTGC  1046

seq1  ATATTCTAGCCCTGGGATGCCCAGCAGGAGGAACG-AAGAAGGATG  1093
      ||||||||| ||||||||| |||||| |||||||| ||||||||||
seq2  ATATTCTAG-CCTGGGATG-CCAGCA-GAGGAACGAAAGAAGGATG  1089