BAC Information

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BAC

Clone NameB6Ng01-074I03
Chromosome7 (Build37)Y (Build37)
Map Location 68,692,926 - 68,693,547573,321 - 573,489
singlet/doubletsingletsinglet
Overlap geneB230209E15Rik, EG620934
Upstream geneLOC100041201, LOC100041211, LOC664896, LOC100041229, LOC625287, D0Kist2, LOC100041248, LOC100041259, EG664943
Downstream geneLOC100041293, Ndn, Magel2, Mkrn3, Peg12, Atp5l-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074I03.bB6Ng01-074I03.g
ACCDH891339DH891340
length818494
definitionDH891339|Mus musculus domesticus DNA, BAC clone: B6Ng01-074I03, 5' end.DH891340|Mus musculus domesticus DNA, BAC clone: B6Ng01-074I03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(68,692,926 - 68,693,547)(573,321 - 573,489)
sequence
gaattcaagagatagaagatagaatctcagatgtagaagataccatagaa
aacattgacacaaccgtcaaagaaaacggaaaatacaaaaagctccaaat
tcaaaacatccataaaatccaggacacaatgagaagaccaaacctaataa
aaataggcctagaagtcagcaaatatttccacctcaaagggccaataaac
atcttcaacaaatttatagaagaaaatttcactaacctgaagaaatagat
gaccataaacatataagcagcctacagaatggcaaattgttaggaacaaa
aaagaaatccctctcatcacatcataatcaaaacaccaaatacaaagagc
agaggtagaatgttaaaagtggtaagggaaagaagttcaagtaacatata
aaggcagaccaatcagaattacaccagacttctcaacaaagactataaaa
gtcagaagatcttgggcagatgtcatacagaccctaagagaacaaaaatg
acagcctaggctactatagccatccaaactctcaattcccatagatggag
aaatcaagaaattccatgacaaatccaaatttagaaagtaactttagcca
aacccagccttacagaggataatagatggaacgctctaccacaaggaagg
aaactacaccctagactaacctagaaattaatctcttctttttttttttt
tttagaataacaaaaaatattttactaaaacataagatctacagaagttt
ccagaaaagccatacaaaatggtcacaagctttttcttcatctttcgggt
ggggggtggggggggtgg
tctgtttagctctgagccccatttgtaatggggctatctaattttctgga
gtccaccttcttgagttctttatatatatatatataggataggagttaca
gagacacaatttggagctgagacaaaaggatggaccatctagagactgcc
atacccggggaatccatcccataatcagcctccaaacgctgacaccatta
catacactagcaaacttttgctgaaaggaccctgatttaactatctcttg
tgagactatgccggggcctagcaaacacagaagtggaggctcatagtcag
ctattggatggataactgggcccccaatggagaagctagagaaagtaccc
aaggagctaaagggatctgcaaccctataggtggaataatatgaactaag
cagtacacccaggatctcttgtctctagctgcatatgtatcagaagatgg
cctagttggccatcagtggaaagagaggcccattggtcttgcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_68692926_68693547
seq2: B6Ng01-074I03.b_241_865

seq1  AATAAACATCTTCAACAAATTTATAGAAGAAAATTTCACTAACCTGAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACATCTTCAACAAATTTATAGAAGAAAATTTCACTAACCTGAAGA  50

seq1  AATAGATGACCATAAACATATAAGCAGCCTACAGAATGGCAAATTGTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATGACCATAAACATATAAGCAGCCTACAGAATGGCAAATTGTTAG  100

seq1  GAACAAAAAAGAAATCCCTCTCATCACATCATAATCAAAACACCAAATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAAAAAGAAATCCCTCTCATCACATCATAATCAAAACACCAAATAC  150

seq1  AAAGAGCAGAGGTAGAATGTTAAAAGTGGTAAGGGAAAGAAGTTCAAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCAGAGGTAGAATGTTAAAAGTGGTAAGGGAAAGAAGTTCAAGTA  200

seq1  ACATATAAAGGCAGACCAATCAGAATTACACCAGACTTCTCAACAAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAAAGGCAGACCAATCAGAATTACACCAGACTTCTCAACAAAGAC  250

seq1  TATAAAAGTCAGAAGATCTTGGGCAGATGTCATACAGACCCTAAGAGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAGTCAGAAGATCTTGGGCAGATGTCATACAGACCCTAAGAGAAC  300

seq1  AAAAATGACAGCCTAGGCTACTATAGCCATCCAAACTCTCAATTCCCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGACAGCCTAGGCTACTATAGCCATCCAAACTCTCAATTCCCATA  350

seq1  GATGGAGAAATCAAGAAATTCCATGACAAATCCAAATTTAGAAAGTAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGAAATCAAGAAATTCCATGACAAATCCAAATTTAGAAAGTAACT  400

seq1  TTAGCCAAACCCAGCCTTACAGAGGATAATAGATGGAACGCTCTACCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCAAACCCAGCCTTACAGAGGATAATAGATGGAACGCTCTACCACA  450

seq1  AGGAAGGAAACTACACCCTAGACTAACCTAGAAATTAATCTCTTCTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAAACTACACCCTAGACTAACCTAGAAATTAATCTCTTCTTTTT  500

seq1  TTTTTTTTTTAGAATAACAAAAAATATTTTACTAAAACATAAGATCTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTAGAATAACAAAAAATATTTTACTAAAACATAAGATCTACA  550

seq1  GAAGTTTCCAGAAAAGCCATACAAAATGGTCACAAGCTTTTTCTTCATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTCCAGAAAAGCCATACAAAATGGTCACAAGCTTTTTCTTCATCT  600

seq1  TTCGGGTGGGG---GTGGGGGGTGG  622
      |||||||||||   | |||||||||
seq2  TTCGGGTGGGGGGTGGGGGGGGTGG  625

seq1: chrY_573321_573489
seq2: B6Ng01-074I03.g_399_566

seq1  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAAACCT  50
      |||||| ||||||||||||||||||||||||||||||||||||||| |||
seq2  ATGGAGAAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCT  50

seq1  ATAGATGGAACAACAATATGAA-TAACCAGTATCCACA-GAGCTCATGTC  98
      |||| |||   || |||||||| ||| |||||  | || || ||| ||||
seq2  ATAGGTGG---AATAATATGAACTAAGCAGTACACCCAGGATCTCTTGTC  97

seq1  TCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCATTGGGAAG  148
      |||||||||||||||||||||||||||||||||||||||||| ||| |||
seq2  TCTAGCTGCATATGTATCAGAAGATGGCCTAGTTGGCCATCAGTGGAAAG  147

seq1  AGAGGCCCCTTGGTCTTGCAA  169
      |||||||| ||||||||||||
seq2  AGAGGCCCATTGGTCTTGCAA  168