BAC Information

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BAC

Clone NameB6Ng01-075E15
Chromosome7 (Build37)
Map Location 100,901,870 - 100,902,989
singlet/doubletsinglet
Overlap genenone
Upstream geneRab30, 4632434I11Rik, Prcp, A830059I20Rik, LOC100040298, LOC666783
Downstream geneEG638305, EG545982, EG666816
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075E15.bB6Ng01-075E15.g
ACCDH891887DH891888
length1,2411,105
definitionDH891887|Mus musculus domesticus DNA, BAC clone: B6Ng01-075E15, 5' end.DH891888|Mus musculus domesticus DNA, BAC clone: B6Ng01-075E15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggctcatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggtgcgaagcttaaaacaatcccactaaa
atcagggactagaaaaggctgtccattttctccctacctattcaacattg
tagttgaaatcctagccagagcaattcgaaaacaaaaggagttcaagggg
attcaaattggaaagtcagaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccatcagagaactcctaaaaa
tgataaacagcttcagtgaagtagctggatacaaaattaactcaaaaaag
tcaatggcctttctctacacaaagaataaacaggctgagaaggaaattag
ggagacaacatccttcacaattgtcacaaataatattaaataccttggtg
tgactctaactaaggaagtaaatgatctgtatgataagaacttccagtct
ctgaagaaagaaattaaagaagatctcataagatggaaagatctcccatg
ctcatggattggcaggatcaacactgtaaaagtagctatcttggcaaaag
caatctacagattcaatgcaatccccatcaaaattccaaatcaattcttc
aacgaattagaaagagcaatctgcaaatttatctggaataacaaaaaacc
taggatatcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcatgacctaaagctgtactacagagaaattgtgataaaaactgca
tggtactggtatagtgacagacaagtagaccaaatggaatagaattgaag
acccagaaatgaacccacacaccaatggtcacttgatctttgacaaggga
gctaaaaccatccagtggaaaaaagacagcattttcacaaatggtgctgg
cacaactggtgttatcatgtagaagaatgtgaattgacccattcctatct
ctgtactagtcaaatataagtggatcaaggaactcatgtaaaaacagaga
cactgaaacttatagaggagaaagtgggaagcctgagatatggcacaggg
gaaaattctgaatgaacgaattgcttgtgctgtaagatcaagatgaacaa
tggactcataactgcagctcttaggcctaaggaccatcatagacaatagt
caacactcacatcactagagatgtggtagagatgaattcgt
gaattcagtaagaatgctacctattcagtaacattcaaaattacctctag
tagagacagtgaaagtaatcaggcattacaatttacttgagtacagctag
aaatctcaaggctagtttacatagtaaatacttagagcaatagctgagtc
actccccattcacaggaatttacaatggcctaggaagaaggtgggttgtc
cttttaggaggaactgaagtattattcatgaaaggattagtagaacagaa
ttcccctggtgcatgtttttcactaggcccagaggaatagcacagtcagg
tatttactaaaggacccttggtggtgggtttaacaatagactagcattgc
atcagaccattcacctgaacactgccataatagactaaatctgtaagcca
gcttcatttaaatgttgtcctctataagtcttaccttgctcatagtgtct
gttctcagtggtaacacagtatataagacagtatcttcatagataatgca
tgtgtcatgtcgctatcccccaaaaggattacgtttaaatgttaatacta
atatttattatttattgagagtattattaaaagattttgcatggaaataa
taacctaactgcacctaatgctaagaatgtcacacatttagactctgcca
tgttttctaagtctccattctttctcaattctagcatatatttaatattg
tcataattcagaacccattacaaaaatgagaattaacttgaaaattttac
tttcctgtttgactattagttatggcatattgaccagaattgattgtctc
tctatttctctctcatctgctcatctgggttctgaccaatgttcttcctt
caagaattccatatacacatacccatgtgtataattcatagatgatcact
actcagtattgttgatctaaagcagatagaatatacaaactaagatgtaa
gctaaattactccaacatctcagattcagatcatcagatatatgaataat
acacaacacacacacacacacacacactttttgtgattactatgttgagt
ttacttctgtttgcaatgtgggaacatataaatgctataggtactcatac
catac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_100901870_100902989
seq2: B6Ng01-075E15.g_67_1171

seq1  GAATTCAGTAAGAATGCTACCTATTCAGTAACATTCAAAATTACCTCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAAGAATGCTACCTATTCAGTAACATTCAAAATTACCTCTAG  50

seq1  TAGAGACAGTGAAAGTAATCAGGCATTACAATTTACTTGAGTACAGCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGACAGTGAAAGTAATCAGGCATTACAATTTACTTGAGTACAGCTAG  100

seq1  AAATCTCAAGGCTAGTTTACATAGTAAATACTTAGAGCAATAGCTGAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCAAGGCTAGTTTACATAGTAAATACTTAGAGCAATAGCTGAGTC  150

seq1  ACTCCCCATTCACAGGAATTTACAATGGCCTAGGAAGAAGGTGGGTTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCATTCACAGGAATTTACAATGGCCTAGGAAGAAGGTGGGTTGTC  200

seq1  CTTTTAGGAGGAACTGAAGTATTATTCATGAAAGGATTAGTAGAACAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGGAGGAACTGAAGTATTATTCATGAAAGGATTAGTAGAACAGAA  250

seq1  TTCCCCTGGTGCATGTTTTTCACTAGGCCCAGAGGAATAGCACAGTCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTGGTGCATGTTTTTCACTAGGCCCAGAGGAATAGCACAGTCAGG  300

seq1  TATTTACTAAAGGACCCTTGGTGGTGGGTTTAACAATAGACTAGCATTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACTAAAGGACCCTTGGTGGTGGGTTTAACAATAGACTAGCATTGC  350

seq1  ATCAGACCATTCACCTGAACACTGCCATAATAGACTAAATCTGTAAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGACCATTCACCTGAACACTGCCATAATAGACTAAATCTGTAAGCCA  400

seq1  GCTTCATTTAAATGTTGTCCTCTATAAGTCTTACCTTGCTCATAGTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCATTTAAATGTTGTCCTCTATAAGTCTTACCTTGCTCATAGTGTCT  450

seq1  GTTCTCAGTGGTAACACAGTATATAAGACAGTATCTTCATAGATAATGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAGTGGTAACACAGTATATAAGACAGTATCTTCATAGATAATGCA  500

seq1  TGTGTCATGTCGCTATCCCCCAAAAGGATTACGTTTAAATGTTAATACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCATGTCGCTATCCCCCAAAAGGATTACGTTTAAATGTTAATACTA  550

seq1  ATATTTATTATTTATTGAGAGTATTATTAAAAGATTTTGCATGGAAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATTATTTATTGAGAGTATTATTAAAAGATTTTGCATGGAAATAA  600

seq1  TAACCTAACTGCACCTAATGCTAAGAATGTCACACATTTAGACTCTGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTAACTGCACCTAATGCTAAGAATGTCACACATTTAGACTCTGCCA  650

seq1  TGTTTTCTAAGTCTCCATTCTTTCTCAATTCTAGCATATATTTAATATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTAAGTCTCCATTCTTTCTCAATTCTAGCATATATTTAATATTG  700

seq1  TCATAATTCAGAACCCATTACAAAAATGAGAATTAACTTGAAAATTTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATTCAGAACCCATTACAAAAATGAGAATTAACTTGAAAATTTTAC  750

seq1  TTTCCTGTTTGACTATTAGTTATGGCATATTGACCAGAATTGATTGTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGTTTGACTATTAGTTATGGCATATTGACCAGAATTGATTGTCTC  800

seq1  TCTATTTCTCTCTCATCTGCTCATCTGGGTTCTGACCAATGTTCTTCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTCTCTCTCATCTGCTCATCTGGGTTCTGACCAATGTTCTTCCTT  850

seq1  CAAGAATTCCATATACACATACCCATGTGTATAATTCATAGATGATCACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATTCCATATACACATACCCATGTGTATAATTCATAGATGATCACT  900

seq1  ACTCAGTATTGTTGATCTAAAGCAGAATAGAATATACAAACTAAGATGTA  950
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ACTCAGTATTGTTGATCTAAAGCAG-ATAGAATATACAAACTAAGATGTA  949

seq1  AGCTAAATTACTCCAACATCTCAGAATTCAAGATCAATCAGATATATGAA  1000
      |||||||||||||||||||||||| |||| ||||| |||||||||||| |
seq2  AGCTAAATTACTCCAACATCTCAG-ATTC-AGATC-ATCAGATATATG-A  995

seq1  ATAATACACACACACACACACACACACACACAACTTTTTGTGAATTACTA  1050
      |||||||||| |||||||||||||||||||| |||||||||| |||||||
seq2  ATAATACACA-ACACACACACACACACACAC-ACTTTTTGTG-ATTACTA  1042

seq1  TGTTGAGTTTACTTCTGTTTGCAATGTTGGGAACAATTATAAATGCTATA  1100
      |||||||||||||||||||||||||| ||||||||  |||||||||||||
seq2  TGTTGAGTTTACTTCTGTTTGCAATG-TGGGAACA--TATAAATGCTATA  1089

seq1  GTTTACCTTCATTACCATAC  1120
      |  |||  ||| ||||||||
seq2  G-GTAC--TCA-TACCATAC  1105