BAC Information

Click to search

BAC

Clone NameB6Ng01-075L23
Chromosome7 (Build37)
Map Location 8,326,309 - 8,327,152
singlet/doubletsinglet
Overlap geneLOC100042695
Upstream geneLOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688
Downstream geneLOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075L23.g
ACCDH892220
length1,081
definitionDH892220|Mus musculus domesticus DNA, BAC clone: B6Ng01-075L23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttttcttgagacaaaatgcctccctgtaacttttacctactg
atattttttttctcacccaaataagctctattgtcgtgcatacagccacc
cacaagtctatgaaaataaaagttatgtcccatttcagggctgggaatgc
acttgattccccaactgtgcaaaaaatgtgtgtgaatgtgtatgtgtgtg
tgtatgagagagagacagatttaacatcatgaatagagctataaaatact
aatttttatacctttcttatttaaacatgaatcttaatgtgttcatttgc
tgacaattaacatagaagtttgtaacaaaactcaagatcaccattcttta
gagcaccactctactataatgtgaccttgaagggaaaaagtccaataggg
aagtaaaacttaagcataaagcaccacttaagacgacctgataaaaactt
tgcgatgcttcgggtagagaaagctcagaataagagctcagaatgtctgg
agaaagaatgatgtcaaaagataattccccattcctacattgcctggcgt
aggtcatgcaatgaagttttaaatgtgcaaaataaagaaagagttaggat
atacaacttgaaaattaaccctgataataaaactaggtttctttttgcct
ttagccttctttaaaaagtataccagttgaatgttagaaatataattgca
ttttttttttttataaaagtcctactatatatcaggcacaaaggtaaaaa
taataaatttctctatatataaacttgctatttacttactgttttctcca
tataagatattaaaagtatactctgataaatgatgcttatatgtccatgc
agtgtgacacatggacacatattaggggtatctaactctcttttattggt
caagtagtacttcccaaatattgttataagaaagcacaacctccaaaaat
aattattttctgagtgaatggataggaagttgacaaaaatcccaaagtca
gggaaaagaattgagcaatccaggagtatcgcccgtttttgaggaattat
ttaactcttaatatattttaccaaaacaaaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_8326309_8327152
seq2: B6Ng01-075L23.g_286_1148 (reverse)

seq1  TTTTG-TTTGCT--AATATATT-AGAGTTAA--TATTCCTCAAAAACTGC  44
      ||||| |||| |  |||||||| ||||||||   ||||||||||||| | 
seq2  TTTTGTTTTGGTAAAATATATTAAGAGTTAAATAATTCCTCAAAAACGGG  50

seq1  TGATACTCCTGGATTGCTC-ATTC-TTTCCCT-ACTTT-GGATTTTTGTC  90
       |||||||||||||||||| |||| ||||||| ||||| |||||||||||
seq2  CGATACTCCTGGATTGCTCAATTCTTTTCCCTGACTTTGGGATTTTTGTC  100

seq1  AACTTCCTAT-CATTCACTCAGAAAATAATTATTTTTGGA-GTTGTGC-T  137
      |||||||||| ||||||||||||||||||||||||||||| ||||||| |
seq2  AACTTCCTATCCATTCACTCAGAAAATAATTATTTTTGGAGGTTGTGCTT  150

seq1  TCTTATAAC-ATATTTAGGAAGTACTACTTGACC-ATAAATGAGAGTTAG  185
      ||||||||| |||||| ||||||||||||||||| ||||| |||||||||
seq2  TCTTATAACAATATTTGGGAAGTACTACTTGACCAATAAAAGAGAGTTAG  200

seq1  ATACCCCTAATATGTGTCCATGTGTCACACTGCATGGACATATAAGCATC  235
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCCTAATATGTGTCCATGTGTCACACTGCATGGACATATAAGCATC  250

seq1  ATTTATCAGAGTATAC-TTTAATATCTTATATGGAG-AAACAGTAAGTAA  283
      |||||||||||||||| ||||||||||||||||||| |||||||||||||
seq2  ATTTATCAGAGTATACTTTTAATATCTTATATGGAGAAAACAGTAAGTAA  300

seq1  ATAGCAAGTTTATATATAGAGAAATTTATTATTTTTACCTTTGTGCCTGA  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAAGTTTATATATAGAGAAATTTATTATTTTTACCTTTGTGCCTGA  350

seq1  TATATAGTAGGACTTTTAT--AAAAAAAAAATGCAATTATATTTCTAACA  381
      |||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  TATATAGTAGGACTTTTATAAAAAAAAAAAATGCAATTATATTTCTAACA  400

seq1  TTCAACTGGTATACTTTTTAAAGAAGGCTAAAGGCAAAAAGAAACCTAGT  431
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTGGTATACTTTTTAAAGAAGGCTAAAGGCAAAAAGAAACCTAGT  450

seq1  TTTATTATCAGGGTTAATTTTCAAGTTGTATATCCTAACTCTTTCTTTAT  481
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATCAGGGTTAATTTTCAAGTTGTATATCCTAACTCTTTCTTTAT  500

seq1  TTTGCACATTTAAAACTTCATTGCATGACCTACGCCAGGCAATGTAGGAA  531
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCACATTTAAAACTTCATTGCATGACCTACGCCAGGCAATGTAGGAA  550

seq1  TGGGGAATTATCTTTTGACATCATTCTTTCTCCAGACATTCTGAGCTCTT  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAATTATCTTTTGACATCATTCTTTCTCCAGACATTCTGAGCTCTT  600

seq1  ATTCTGAGCTTTCTCTACCCGAAGCATCGCAAAGTTTTTATCAGGTCGTC  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAGCTTTCTCTACCCGAAGCATCGCAAAGTTTTTATCAGGTCGTC  650

seq1  TTAAGTGGTGCTTTATGCTTAAGTTTTACTTCCCTATTGGACTTTTTCCC  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGGTGCTTTATGCTTAAGTTTTACTTCCCTATTGGACTTTTTCCC  700

seq1  TTCAAGGTCACATTATAGTAGAGTGGTGCTCTAAAGAATGGTGATCTTGA  731
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGTCACATTATAGTAGAGTGGTGCTCTAAAGAATGGTGATCTTGA  750

seq1  GTTTTGTTACAAACTTCTATGTTAATTGTCAGCAAATGAACACATTAAGA  781
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTACAAACTTCTATGTTAATTGTCAGCAAATGAACACATTAAGA  800

seq1  TTCATGTTTAAATAAGAAAGGTATAAAAATTAGTATTTTATAGCTCTATT  831
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTTTAAATAAGAAAGGTATAAAAATTAGTATTTTATAGCTCTATT  850

seq1  CATGATGTAAAAT  844
      |||||||| ||||
seq2  CATGATGTTAAAT  863