BAC Information

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BAC

Clone NameB6Ng01-076M02
Chromosome7 (Build37)
Map Location 67,226,551 - 67,227,753
singlet/doubletsinglet
Overlap geneSnrpn
Upstream geneLOC668815, EG668818, Ube3a, LOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1, LOC664788, Snurf
Downstream geneEG664849, LOC100041201, LOC100041211, LOC664896, LOC100041229, LOC625287
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076M02.bB6Ng01-076M02.g
ACCDH892928DH892929
length1,2181,187
definitionDH892928|Mus musculus domesticus DNA, BAC clone: B6Ng01-076M02, 5' end.DH892929|Mus musculus domesticus DNA, BAC clone: B6Ng01-076M02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctcctgaagaacaggcattgatttctaatcaatactgaggtta
attactcgagtaagtagtcttaccacagttgcactatgaatgcattgaac
ctggcaggtcattaatatagcatgaaaagtttaatgatggataagaaaat
tattaatttttactctacttagaaaatgcagagagacattttctagcact
ataaaagacagccagcatggaaagattcccgggtagttaaatgtgggttt
ctccatcaaacagtatgtatagtgtcttatataacatggtcttaccatga
agttaacatggggcaattgagaacatgcatgattgttggtatatgcttcc
taggattctttgacttttttattattattaattattttagttatttacta
tccaaatattagaccccttcccacactcccctccacaagcacccaacccc
acccccttcccatcacctctaagagagacttctcctatgcacccacccac
tcctgcctcacatctctcacatcacccttcaatggggcaacaatcctcca
caaaaccaaaagcctcccatccaattgacaccaaataagataatcctctg
ctacatatgcagctggagccatggaatcacccatatttactctttggttg
gtggtttagtccctaaaaggtataaagcatctggttgattgacattgttg
ttcttcccatggggttgcaatccccttcagctcctcagtccttcctctaa
ctcttccattggggttccccaggcccagtccaatggttgactgtgaggat
ctgcatctttcttagtgaggttctagaagagtgtctcagaggacagctac
tgctgtcaacaagcacttcttggcactagcaatagtgtcaggtttggtgt
ctgctgatgggacagataccagggtggggaagtcactggatggactttcc
ttcagtctttgctccaattttttgtccatgcatttcctttagacaggaac
aattctgggtaaagaatttgagaatgggttgatggccctatccctcacct
aggcccatgtcagctactggaatatgttttttcagttccattccctagga
tggaatttggcctaagtcataccaatgatccagagctctccaactgcacc
gggacattctaatggtcctgtactaccgatatacacatcatcgttctggc
tctgatcttcctaggtct
gaattccaatatgtaccttgactctgctattttagcctgactggctgttg
gtaaggtttccataagatgtttgctcagtggattttgtgattttcttctt
agagttggagcttagcccctcgtctctcacaaaatgagatgccttataaa
aaacaaagttgtttgggctttacaacatgttgaaaaatttgataagcaat
cattctaaggagactggttgatttaaggaggaaaagttagatttaagtag
caaaagaaacccagggtgggatgggcctgtcttcaagatgacttctgagc
actacctgcatccagaagctagcaggattcacctgctgacacaactgctt
ctgatcattcagaagtatccctattgcctaccacgcccatgtacagagct
agttgctcagccctaatgaaaaaatagcacatttcctaggtcaattcaga
agtgctaaggagcatcattgaaggcgataattgaaattactgttgccaga
agtactgccccctccattatggttgaagaaaataaatgtggcaaatctca
tagtgaaggaatattttaaagagcaaccagcttcgacactttgactaata
aagccatctttgttacataaattgtagtgtggctgaaatgaaaattgtgt
ggaagaaattgcacctatacagaatgaagtataaatataacatatgtaat
ggtctaataaatcaatgtctcttttaaatttgcatgttgtatgtgctcat
ggcaactatttctctccatccttttttaaagtcagagaatcaatcacagg
atactcattgatttttttttaaatactgtgttaatttgtgtataatgtga
tgttcccactaacagggtcctgcattattcttcctaagactttgagggaa
acatacattaggggcccctgtaaaactagggttaggatttgactttgaga
tgactgtttaaatcctttaaaacagcacagtatttcatagtccctaccca
tctgtggtctactagactttttgtagggtttccataaatcttcctgtttt
tgtcaaagctactggatactgaacattggcttggtgattttatcaaagaa
tgaatttttgtgtctgaattagaaggcctaaagggagttctgccttggaa
aatactttttaatggccattacttgagtagctgctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_67226551_67227753
seq2: B6Ng01-076M02.g_67_1253

seq1  GAATTCCAATATGTACCTTGACTCTGCTATTTTAGCCTGACTGGCTGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATATGTACCTTGACTCTGCTATTTTAGCCTGACTGGCTGTTG  50

seq1  GTAAGGTTTCCATAAGATGTTTGCTCAGTGGATTTTGTGATTTTCTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGTTTCCATAAGATGTTTGCTCAGTGGATTTTGTGATTTTCTTCTT  100

seq1  AGAGTTGGAGCTTAGCCCCTCGTCTCTCACAAAATGAGATGCCTTATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGGAGCTTAGCCCCTCGTCTCTCACAAAATGAGATGCCTTATAAA  150

seq1  AAACAAAGTTGTTTGGGCTTTACAACATGTTGAAAAATTTGATAAGCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAGTTGTTTGGGCTTTACAACATGTTGAAAAATTTGATAAGCAAT  200

seq1  CATTCTAAGGAGACTGGTTGATTTAAGGAGGAAAAGTTAGATTTAAGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTAAGGAGACTGGTTGATTTAAGGAGGAAAAGTTAGATTTAAGTAG  250

seq1  CAAAAGAAACCCAGGGTGGGATGGGCCTGTCTTCAAGATGACTTCTGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAAACCCAGGGTGGGATGGGCCTGTCTTCAAGATGACTTCTGAGC  300

seq1  ACTACCTGCATCCAGAAGCTAGCAGGATTCACCTGCTGACACAACTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCTGCATCCAGAAGCTAGCAGGATTCACCTGCTGACACAACTGCTT  350

seq1  CTGATCATTCAGAAGTATCCCTATTGCCTACCACGCCCATGTACAGAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCATTCAGAAGTATCCCTATTGCCTACCACGCCCATGTACAGAGCT  400

seq1  AGTTGCTCAGCCCTAATGAAAAAATAGCACATTTCCTAGGTCAATTCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCTCAGCCCTAATGAAAAAATAGCACATTTCCTAGGTCAATTCAGA  450

seq1  AGTGCTAAGGAGCATCATTGAAGGCGATAATTGAAATTACTGTTGCCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTAAGGAGCATCATTGAAGGCGATAATTGAAATTACTGTTGCCAGA  500

seq1  AGTACTGCCCCCTCCATTATGGTTGAAGAAAATAAATGTGGCAAATCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTGCCCCCTCCATTATGGTTGAAGAAAATAAATGTGGCAAATCTCA  550

seq1  TAGTGAAGGAATATTTTAAAGAGCAACCAGCTTCGACACTTTGACTAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAAGGAATATTTTAAAGAGCAACCAGCTTCGACACTTTGACTAATA  600

seq1  AAGCCATCTTTGTTACATAAATTGTAGTGTGGCTGAAATGAAAATTGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATCTTTGTTACATAAATTGTAGTGTGGCTGAAATGAAAATTGTGT  650

seq1  GGAAGAAATTGCACCTATACAGAATGAAGTATAAATATAACATATGTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAATTGCACCTATACAGAATGAAGTATAAATATAACATATGTAAT  700

seq1  GGTCTAATAAATCAATGTCTCTTTTAAATTTGCATGTTGTATGTGCTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTAATAAATCAATGTCTCTTTTAAATTTGCATGTTGTATGTGCTCAT  750

seq1  GGCAACTATTTCTCTCCATCCTTTTTTAAAGTCAGAGAATCAATCACAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACTATTTCTCTCCATCCTTTTTTAAAGTCAGAGAATCAATCACAGG  800

seq1  ATACTCATTGATTTTTTTTTAAATACTGTGTTAATTTGTGTATAATGTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCATTGATTTTTTTTTAAATACTGTGTTAATTTGTGTATAATGTGA  850

seq1  TGTTCCCACTAACAGGGTCCTGCATTATTCTTCCTAAGACTTTGAGGGAA  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGTTCCCACTAACAGGGTCCTGCATTATTCTTCCTAAGACTTTGAGGG-A  899

seq1  AACATACATTAGGGGGCCCCTGTAAAAACTAGGGTTAGGATTTGACTTTG  950
      ||||||||||| ||||||||||| ||||||||||||||||||||||||||
seq2  AACATACATTA-GGGGCCCCTGT-AAAACTAGGGTTAGGATTTGACTTTG  947

seq1  AGATGACTGTTTAAATCCTTTAAAACAGCACAGTTATTTCATAGTCCCTA  1000
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGATGACTGTTTAAATCCTTTAAAACAGCACAG-TATTTCATAGTCCCTA  996

seq1  CCCATCTGTGTTCTACTAAGAACTTTTTGTAGGGTTTCCATAAATCTTCC  1050
      |||||||||| |||||||   |||||||||||||||||||||||||||||
seq2  CCCATCTGTGGTCTACTA--GACTTTTTGTAGGGTTTCCATAAATCTTCC  1044

seq1  TG-TTTTGTCAAAAGCTACATGATACTGAACATTGGCTT-GTGATTTTAT  1098
      || ||||||| ||||||||  |||||||||||||||||| ||||||||||
seq2  TGTTTTTGTC-AAAGCTACTGGATACTGAACATTGGCTTGGTGATTTTAT  1093

seq1  CAAAAAGAATGAA-ATCTGTGTCTGAGATTTAGGAGGGCTAAAGGGAGTT  1147
      |  ||||||||||  | |||||||  || |||| ||| |||||||||| |
seq2  C--AAAGAATGAATTTTTGTGTCT--GAATTAGAAGGCCTAAAGGGAG-T  1138

seq1  TCTGCCCT-GAGAATACATTTTTTTTAATGGCAATTTACTTTGATGTAGG  1196
      |||||| | || |||||    ||||||||||| | |||| |||| ||| |
seq2  TCTGCCTTGGAAAATAC----TTTTTAATGGCCA-TTAC-TTGA-GTA-G  1180

seq1  CTGCTTA  1203
      |||||||
seq2  CTGCTTA  1187