BAC Information

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BAC

Clone NameB6Ng01-081D23
Chromosome7 (Build37)
Map Location 72,683,274 - 72,800,950
singlet/doubletdoublet
Overlap geneEG665234, Tarsl2
Upstream geneApba2, 5730507A09Rik, Ndnl2, Tjp1, Gm1693
Downstream geneTm2d3, LOC665241, Pcsk6, Snrpa1, H47, Chsy1, Lrrk1, Aldh1a3, Asb7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081D23.bB6Ng01-081D23.g
ACCDH896156DH896157
length1,021768
definitionDH896156|Mus musculus domesticus DNA, BAC clone: B6Ng01-081D23, 5' end.DH896157|Mus musculus domesticus DNA, BAC clone: B6Ng01-081D23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,799,935 - 72,800,950)(72,683,274 - 72,684,040)
sequence
gaattccaggccaggcagagatacatggtgagaccttgtctcaaaaacaa
acaaacaagcaaaaaatatacagcacacaatatcctcccaggcagaagaa
agaccaggtcgaaagttactctctaagctaagctcatttgaaaaccagtt
ttcacaaatggctaaccacttgacaatcacacaatacacagtgactgagc
taacatgtaaccattataaaacaatggcatacacacaagcaatcattcgg
cagccttacctgtcttcaataaacatatcataataaaacccattttcaat
gggtgggccataacacaggtggcctccatagtaaagttccatggcctccc
ccaggatgtgagcgctggaatgccagtacacctgcaagatgtagacagga
aagctgttagctaccaaaccatcacaggccatcagcagtaaaatagcaca
ggtaatcaagtgaatggacatggaggggataaacaccaaaagtagagagt
ccccaacacctatgtggaagggagtgtccctgcctgcatgctcccctgca
aacttaggtctagctcagagtagctctgccagccactgcagctacagtgt
agctgcttcctaactttccttctatgccactgactgtacagaaccagccc
atctgctcagaacactgagctgagtggccacatggaaacagggatggggg
agtaccagttccccgagtttctccaagacagcctctctggactcaataca
gacagggaagtggctacttggggatattaacaaagtcaatgggactttgt
gttgtcttgtgctggctggtcttatgtcacttgacacacaagactagaat
tatctagaggggagagatctagatccaattgtaaggtactttctttatta
gtgattgatgggggggaggcccagcctaattgtgggtgggtgcattcctg
gctgatggtccttggttctataagaaagccaggtccaggggctgggaaag
gatggatcaagggctccagtg
gaattcctattttctcatatatttatcacacagagacattggctcaatac
aaaggaaacacaaagcaagtctcaagacatctcagaggtttttaatatca
tatagttccttcatagaagtggttcaggaacctatgaattagagtttttt
tttttttttataaagtaatcgcgtgaaaataaaatagcagaaaatatttt
gaaaagagcctcaacaaaacattttatgtaaaaatttccatattaacaaa
acttatttgggaagaaatgggcaatctgtaataagaaatgggacgtgtgc
tgaaagctaggcttgcaaacaacaacacggaaagaaggaaacatcttaca
cgagccgtaaggtcccattttgcccacagcagccccagcttacacctaat
attaatgctcattgattattttcataacccttaattctcaaccatgctcc
agtgagaggataagccatatgttcagccttcctgcttataataattacag
aaactaaatctgcagttgaaaatgttcctccaaaaaaatgtgtgggctca
tattcatcagcatatcaaatgggagacatcattttcatcttaggcaactc
tctataaaaagagaaaatacaccccaacttttgagaataaaatctggctg
aaagtctggggtgcagttctgtgctggagtccttctgtggcatgtgtgaa
gctctgggctcaagccttggcgcaagaaaagggagagagagggagagaga
gagagacagagagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_72799935_72800950
seq2: B6Ng01-081D23.b_45_1065 (reverse)

seq1  CACT-GAGCCC-TGATCCATC--TTTCCAGCCCCTTGACCT-GCTTTCTT  45
      |||| |||||| |||||||||  || ||||||||| ||||| ||||||||
seq2  CACTGGAGCCCTTGATCCATCCTTTCCCAGCCCCTGGACCTGGCTTTCTT  50

seq1  ATAGAACCCAGGACCATCAGCCCAGGAATTGCA-CCACCCACAA-TAGGC  93
      |||||||| ||||||||||| ||||||| |||| |||||||||| |||||
seq2  ATAGAACCAAGGACCATCAG-CCAGGAA-TGCACCCACCCACAATTAGGC  98

seq1  TGGGCCT-CCCCCCATCAATCACTAATTAAGAAAGTACCTTACAATTGGA  142
      ||||||| ||||||||||||||||||| ||||||||||||||||||||||
seq2  TGGGCCTCCCCCCCATCAATCACTAATAAAGAAAGTACCTTACAATTGGA  148

seq1  TCTAGATTCTCT-CCCTCTAGATAATTCTAGTCTTGTGTGTCAAGTTGAC  191
      |||||| ||||| |||||||||||||||||||||||||||||||| ||||
seq2  TCTAGA-TCTCTCCCCTCTAGATAATTCTAGTCTTGTGTGTCAAG-TGAC  196

seq1  ATAAGACCAGCCAGCACAAGACAACACAAAGTCCCATTGACTTTGTTAAT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGACCAGCCAGCACAAGACAACACAAAGTCCCATTGACTTTGTTAAT  246

seq1  ATCCCCAAGTAGCCACTTCCCTGTCTGTATTGAGTCCAGAGAGGCTGTCT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCAAGTAGCCACTTCCCTGTCTGTATTGAGTCCAGAGAGGCTGTCT  296

seq1  TGGAGAAACTCGGGGAACTGGTACTCCCCCATCCCTGTTTCCATGTGGCC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAACTCGGGGAACTGGTACTCCCCCATCCCTGTTTCCATGTGGCC  346

seq1  ACTCAGCTCAGTGTTCTGAGCAGATGGGCTGGTTCTGTACAGTCAGTGGC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCTCAGTGTTCTGAGCAGATGGGCTGGTTCTGTACAGTCAGTGGC  396

seq1  ATAGAAGGAAAGTTAGGAAGCAGCTACACTGTAGCTGCAGTGGCTGGCAG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGGAAAGTTAGGAAGCAGCTACACTGTAGCTGCAGTGGCTGGCAG  446

seq1  AGCTACTCTGAGCTAGACCTAAGTTTGCAGGGGAGCATGCAGGCAGGGAC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACTCTGAGCTAGACCTAAGTTTGCAGGGGAGCATGCAGGCAGGGAC  496

seq1  ACTCCCTTCCACATAGGTGTTGGGGACTCTCTACTTTTGGTGTTTATCCC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCTTCCACATAGGTGTTGGGGACTCTCTACTTTTGGTGTTTATCCC  546

seq1  CTCCATGTCCATTCACTTGATTACCTGTGCTATTTTACTGCTGATGGCCT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGTCCATTCACTTGATTACCTGTGCTATTTTACTGCTGATGGCCT  596

seq1  GTGATGGTTTGGTAGCTAACAGCTTTCCTGTCTACATCTTGCAGGTGTAC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGTTTGGTAGCTAACAGCTTTCCTGTCTACATCTTGCAGGTGTAC  646

seq1  TGGCATTCCAGCGCTCACATCCTGGGGGAGGCCATGGAACTTTACTATGG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTCCAGCGCTCACATCCTGGGGGAGGCCATGGAACTTTACTATGG  696

seq1  AGGCCACCTGTGTTATGGCCCACCCATTGAAAATGGGTTTTATTATGATA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCACCTGTGTTATGGCCCACCCATTGAAAATGGGTTTTATTATGATA  746

seq1  TGTTTATTGAAGACAGGTAAGGCTGCCGAATGATTGCTTGTGTGTATGCC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTGAAGACAGGTAAGGCTGCCGAATGATTGCTTGTGTGTATGCC  796

seq1  ATTGTTTTATAATGGTTACATGTTAGCTCAGTCACTGTGTATTGTGTGAT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTATAATGGTTACATGTTAGCTCAGTCACTGTGTATTGTGTGAT  846

seq1  TGTCAAGTGGTTAGCCATTTGTGAAAACTGGTTTTCAAATGAGCTTAGCT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAGTGGTTAGCCATTTGTGAAAACTGGTTTTCAAATGAGCTTAGCT  896

seq1  TAGAGAGTAACTTTCGACCTGGTCTTTCTTCTGCCTGGGAGGATATTGTG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAGTAACTTTCGACCTGGTCTTTCTTCTGCCTGGGAGGATATTGTG  946

seq1  TGCTGTATATTTTTTGCTTGTTTGTTTGTTTTTGAGACAAGGTCTCACCA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTATATTTTTTGCTTGTTTGTTTGTTTTTGAGACAAGGTCTCACCA  996

seq1  TGTATCTCTGCCTGGCCTGGAATTC  1016
      |||||||||||||||||||||||||
seq2  TGTATCTCTGCCTGGCCTGGAATTC  1021

seq1: chr7_72683274_72684040
seq2: B6Ng01-081D23.g_71_838

seq1  GAATTCCTATTTTCTCATATATTTATCACACAGAGACATTGGCTCAATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATTTTCTCATATATTTATCACACAGAGACATTGGCTCAATAC  50

seq1  AAAGGAAACACAAAGCAAGTCTCAAGACATCTCAGAGGTTTTTAATATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAACACAAAGCAAGTCTCAAGACATCTCAGAGGTTTTTAATATCA  100

seq1  TATAGTTCCTTCATAGAAGTGGTTCAGGAACCTATGAATTAGAGTTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTCCTTCATAGAAGTGGTTCAGGAACCTATGAATTAGAGTTTTTT  150

seq1  TTTTTTTTTATAAAGTAATCGCGTGAAAATAAAATAGCAGAAAATATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTATAAAGTAATCGCGTGAAAATAAAATAGCAGAAAATATTTT  200

seq1  GAAAAGAGCCTCAACAAAACATTTTATGTAAAAATTTCCATATTAACAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAGCCTCAACAAAACATTTTATGTAAAAATTTCCATATTAACAAA  250

seq1  ACTTATTTGGGAAGAAATGGGCAATCTGTAATAAGAAATGGGACGTGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTTGGGAAGAAATGGGCAATCTGTAATAAGAAATGGGACGTGTGC  300

seq1  TGAAAGCTAGGCTTGCAAACAACAACACGGAAAGAAGGAAACATCTTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGCTAGGCTTGCAAACAACAACACGGAAAGAAGGAAACATCTTACA  350

seq1  CGAGCCGTAAGGTCCCATTTTGCCCACAGCAGCCCCAGCTTACACCTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCCGTAAGGTCCCATTTTGCCCACAGCAGCCCCAGCTTACACCTAAT  400

seq1  ATTAATGCTCATTGATTATTTTCATAACCCTTAATTCTCAACCATGCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGCTCATTGATTATTTTCATAACCCTTAATTCTCAACCATGCTCC  450

seq1  AGTGAGAGGATAAGCCATATGTTCAGCCTTCCTGCTTATAATAATTACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGAGGATAAGCCATATGTTCAGCCTTCCTGCTTATAATAATTACAG  500

seq1  AAACTAAATCTGCAGTTGAAAATGTTCCTCCAAAAAAATGTGTGGGCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAATCTGCAGTTGAAAATGTTCCTCCAAAAAAATGTGTGGGCTCA  550

seq1  TATTCATCAGCATATCAAATGGGAGACATCATTTTCATCTTAGGCAACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATCAGCATATCAAATGGGAGACATCATTTTCATCTTAGGCAACTC  600

seq1  TCTAT-AAAAGAGAAAATACACCCCAACTTTTGAGAATAAAATCTGGCTG  649
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAAAAGAGAAAATACACCCCAACTTTTGAGAATAAAATCTGGCTG  650

seq1  AAAGTCTGGGGTGCAGTTCTGTGCTGGAGTCCTTCTGTGGCATGTGTGAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAAGTCTGGGGTGCAGTTCTGTGCTGGAGTCCTTCTGTGGCATGTGTGAA  700

seq1  GCTCTGGGCTCAAGCCTTGGCGCAAGAAAAGGGAGAGAGAGGGAGAGAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGGCTCAAGCCTTGGCGCAAGAAAAGGGAGAGAGAGGGAGAGAGA  750

seq1  GAGAGACAGAGAGAGAGA  767
      ||||||||||||||||||
seq2  GAGAGACAGAGAGAGAGA  768