BAC Information

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BAC

Clone NameB6Ng01-081N09
Chromosome7 (Build37)
Map Location 47,290,114 - 47,379,999
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100038955, LOC100038967, LOC620018, LOC100038914, EG668531, EG628058, EG668618, EG330513, EG434168, 9430025M13Rik, LOC100038985, 3000002G13Rik, EG215208, LOC100039133, LOC100039050, EG668540, 4930558N11Rik
Downstream geneEG628161, LOC100039094, 2900093B09Rik, 4930433I11Rik, EG233164, LOC668555, EG627987
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081N09.bB6Ng01-081N09.g
ACCDH896567DH896568
length1,143693
definitionDH896567|Mus musculus domesticus DNA, BAC clone: B6Ng01-081N09, 5' end.DH896568|Mus musculus domesticus DNA, BAC clone: B6Ng01-081N09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,378,850 - 47,379,999)(47,290,114 - 47,290,807)
sequence
gaattcactggtccaattagttagactcaggtagtagcattggtctgtca
agggtgttctctttcaagtgaatacatgtttgtttttgtgtctccaagaa
agtcatacaatgatatccacagtttgtaattaattggaaataccaggtac
accctgggattggtcacaagaaatgaatggcacgaaacaaatacaaatgg
ctcttgggcatatctatccctgtggataaaatttcccacgtgaaagtggt
gagaatccatgcacaaatcaagaattaacaactacaggaagccattttca
catagagaccactacatagaggccagggttagggtaagggttgggaggag
tcaaggccacatagagagcactgcatagaggctagggttagggttgggag
gtgtcaaggccacagagaaggagctagaatctcaggaagaccatagaaag
acaccgagaaaaggccaggttaccgaagtaaagttttccaaagcagaaag
attcagcaaaagagatgaacacctccccttcctccttggtcctctctttt
gttctaccactgcctcctcacacccacacttagggagaaaccagttgcaa
gagaacctggtaaatgaagttccttgtactccaaagatagtgaaagtctg
gtcaagtaaaccttacaagacaccagctcccatgtcagaggaatttgaag
tctacacaagtgaaagccactgagggttgagataaaagttgaaggaggtt
cctgcagaatttgctgcactaaagctttctggtaccacctgtaagcagaa
gttcagagacaaaggaattaccccttagcttttatgcctaggcaatttga
gccacaacatgtagatcttcacaccgagtcagtcattcaaggcacaggca
gagattcctaagaaatctatcagacccacaacactcagcaggctccattt
ctgccctggatggagtaacagaagaaagactgtgggcagaatgctgggaa
ggagaggagcttacgagagtagacttcttagcaagtctaactaggaagcc
tcttccctccagctgggtatctgattttccttccacctcaaatggccttt
agtacaaatttaatatccgggtcttatggaaagtgattctgaa
gaattcttggatccattaaataaggcccatcattcagtgttttcatgttt
ctgtatcacattcacctgaagccctgacagtgttcatcacaggctcccag
aggcaggagaggccgtcatgtaccgcctcaaccctttacctgaaggagaa
tctttcttagaatatgtatgacttcaaacaatcacagaaacttcataccg
gtgacaaacacaggttctctatggttccagagcagcagttattcccagca
aatggagtctgcatgtgaaaaacagccatcttcctccttatggatcacag
tggcttcctgcctgggccagtgatcctgccaagatctgccccccccttca
tcaggtcagcctccaggaatcaatgggagtctctgacaaggtgatggtta
tctctgggaccaagaacatgatccactgtattcctagagttagcctcttc
ttaagcatgaaatctatgggttctgctccatccacaaatatagcaagcca
taatttttctcgttgggaatataaacacaatgtgttgaaaagaaccattg
tttaataatggtaccaatttgtgaaaatatcagcttggggtggaggatgc
tgaaaagaggagtgcaactctgtggggatgaaggagggagaggatggaaa
aggaatggctagaggacttattatgagcaaaacacataaagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_47378850_47379999
seq2: B6Ng01-081N09.b_43_1185 (reverse)

seq1  TTCAGAAACACATTTTCCATAAGGGACCCGGATATTTAAAAATTGTGAAC  50
      ||||||| |||  |||||||||  ||||||||||||   ||||| || ||
seq2  TTCAGAATCAC--TTTCCATAA--GACCCGGATATT---AAATT-TGTAC  42

seq1  TAAA-GCCATATGGAGTGGAAGGAAAATCAGATA-TCAGCTGGAGGGAAG  98
      |||| ||||| ||  |||||||||||||||||||  ||||||||||||||
seq2  TAAAGGCCATTTGAGGTGGAAGGAAAATCAGATACCCAGCTGGAGGGAAG  92

seq1  A-GCTTCCTAGTTAGACTTGCTAAGAAGTCTACCTCTCGT-AGCTCCTCT  146
      | |||||||||||||||||||||||||||||| ||||||| |||||||||
seq2  AGGCTTCCTAGTTAGACTTGCTAAGAAGTCTA-CTCTCGTAAGCTCCTCT  141

seq1  CCTTCCCCAGCATTCCTGCCCCACAGTCCTTCTTCTGTTACTTCAATCAA  196
      |||| ||||||||| ||| ||||||||| ||||||||||||| ||  || 
seq2  CCTT-CCCAGCATT-CTG-CCCACAGTCTTTCTTCTGTTACTCCATCCAG  188

seq1  GGCAGAAATGGAGCCTGCTGAGTGTTGTGGGTCTGATAGATTTCTTAGGA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAAATGGAGCCTGCTGAGTGTTGTGGGTCTGATAGATTTCTTAGGA  238

seq1  ATCTCTGCCTGTGCCTTGAATGACTGACTCGGTGTGAAGATCTACATGTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGCCTGTGCCTTGAATGACTGACTCGGTGTGAAGATCTACATGTT  288

seq1  GTGGCTCAAATTGCCTAGGCATAAAAGCTAAGGGGTAATTCCTTTGTCTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCAAATTGCCTAGGCATAAAAGCTAAGGGGTAATTCCTTTGTCTC  338

seq1  TGAACTTCTGCTTACAGGTGGTACCAGAAAGCTTTAGTGCAGCAAATTCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTCTGCTTACAGGTGGTACCAGAAAGCTTTAGTGCAGCAAATTCT  388

seq1  GCAGGAACCTCCTTCAAC-TTTATCTCAACCCTCAGTGGCTTTCACTTGT  445
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GCAGGAACCTCCTTCAACTTTTATCTCAACCCTCAGTGGCTTTCACTTGT  438

seq1  GTAGACTTCAAATTCCTCTGACATGGGAGCTGGTGTCTTGTAAGGTTTAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACTTCAAATTCCTCTGACATGGGAGCTGGTGTCTTGTAAGGTTTAC  488

seq1  TTGACCAGACTTTCACTATCTTTGGAGTACAAGGAACTTCATTTACCAGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCAGACTTTCACTATCTTTGGAGTACAAGGAACTTCATTTACCAGG  538

seq1  TTCTCTTGCAACTGGTTTCTCCCTAAGTGTGGGTGTGAGGAGGCAGTGGT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTGCAACTGGTTTCTCCCTAAGTGTGGGTGTGAGGAGGCAGTGGT  588

seq1  AGAACAAAAGAGAGGACCAAGGAGGAAGGGGAGGTGTTCATCTCTTTTGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAAAGAGAGGACCAAGGAGGAAGGGGAGGTGTTCATCTCTTTTGC  638

seq1  TGAATCTTTCTGCTTTGGAAAACTTTACTTCGGTAACCTGGCCTTTTCTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTTTCTGCTTTGGAAAACTTTACTTCGGTAACCTGGCCTTTTCTC  688

seq1  GGTGTCTTTCTATGGTCTTCCTGAGATTCTAGCTCCTTCTCTGTGGCCTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCTTTCTATGGTCTTCCTGAGATTCTAGCTCCTTCTCTGTGGCCTT  738

seq1  GACACCTCCCAACCCTAACCCTAGCCTCTATGCAGTGCTCTCTATGTGGC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCTCCCAACCCTAACCCTAGCCTCTATGCAGTGCTCTCTATGTGGC  788

seq1  CTTGACTCCTCCCAACCCTTACCCTAACCCTGGCCTCTATGTAGTGGTCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACTCCTCCCAACCCTTACCCTAACCCTGGCCTCTATGTAGTGGTCT  838

seq1  CTATGTGAAAATGGCTTCCTGTAGTTGTTAATTCTTGATTTGTGCATGGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTGAAAATGGCTTCCTGTAGTTGTTAATTCTTGATTTGTGCATGGA  888

seq1  TTCTCACCACTTTCACGTGGGAAATTTTATCCACAGGGATAGATATGCCC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACCACTTTCACGTGGGAAATTTTATCCACAGGGATAGATATGCCC  938

seq1  AAGAGCCATTTGTATTTGTTTCGTGCCATTCATTTCTTGTGACCAATCCC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCCATTTGTATTTGTTTCGTGCCATTCATTTCTTGTGACCAATCCC  988

seq1  AGGGTGTACCTGGTATTTCCAATTAATTACAAACTGTGGATATCATTGTA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGTACCTGGTATTTCCAATTAATTACAAACTGTGGATATCATTGTA  1038

seq1  TGACTTTCTTGGAGACACAAAAACAAACATGTATTCACTTGAAAGAGAAC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTCTTGGAGACACAAAAACAAACATGTATTCACTTGAAAGAGAAC  1088

seq1  ACCCTTGACAGACCAATGCTACTACCTGAGTCTAACTAATTGGACCAGTG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTGACAGACCAATGCTACTACCTGAGTCTAACTAATTGGACCAGTG  1138

seq1  AATTC  1150
      |||||
seq2  AATTC  1143

seq1: chr7_47290114_47290807
seq2: B6Ng01-081N09.g_66_758

seq1  GAATTCTTGGATCCATTAAATAAGGCCCATCATTCAGTGTTTTCATGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGATCCATTAAATAAGGCCCATCATTCAGTGTTTTCATGTTT  50

seq1  CTGTATCACATTCACCTGAAGCCCTGACAGTGTTCATCACAGGCTCCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATCACATTCACCTGAAGCCCTGACAGTGTTCATCACAGGCTCCCAG  100

seq1  AGGCAGGAGAGGCCGTCATGTACCGCCTCAACCCTTTACCTGAAGGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGAGAGGCCGTCATGTACCGCCTCAACCCTTTACCTGAAGGAGAA  150

seq1  TCTTTCTTAGAATATGTATGACTTCAAACAATCACAGAAACTTCATACCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTAGAATATGTATGACTTCAAACAATCACAGAAACTTCATACCG  200

seq1  GTGACAAACACAGGTTCTCTATGGTTCCAGAGCAGCAGTTATTCCCAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAAACACAGGTTCTCTATGGTTCCAGAGCAGCAGTTATTCCCAGCA  250

seq1  AATGGAGTCTGCATGTGAAAAACAGCCATCTTCCTCCTTATGGATCACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGTCTGCATGTGAAAAACAGCCATCTTCCTCCTTATGGATCACAG  300

seq1  TGGCTTCCTGCCTGGGCCAGTGATCCTGCCAAGATCTGCCCCCCCCTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCCTGCCTGGGCCAGTGATCCTGCCAAGATCTGCCCCCCCCTTCA  350

seq1  TCAGGTCAGCCTCCAGGAATCAATGGGAGTCTCTGACAAGGTGATGGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCAGCCTCCAGGAATCAATGGGAGTCTCTGACAAGGTGATGGTTA  400

seq1  TCTCTGGGACCAAGAACATGATCCACTGTATTCCTAGAGTTAGCCTCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGGACCAAGAACATGATCCACTGTATTCCTAGAGTTAGCCTCTTC  450

seq1  TTAAGCATGAAATCTATGGGTTCTGCTCCATCCACAAATATAGCAAGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCATGAAATCTATGGGTTCTGCTCCATCCACAAATATAGCAAGCCA  500

seq1  TAATTTTTCTCGTTGGGAATATAAACACAATGTGTTGAAAAGAACCATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTCTCGTTGGGAATATAAACACAATGTGTTGAAAAGAACCATTG  550

seq1  TTTAATAATGGTACCAATTTGTGAAAATATCAGCTTGGGGTGGAGGATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATAATGGTACCAATTTGTGAAAATATCAGCTTGGGGTGGAGGATGC  600

seq1  TGAAAAGAGGAGTGCAACTCTGTGGGGATGAAGGAGGGAGAGGATGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGAGGAGTGCAACTCTGTGGGGATGAAGGAGGGAGAGGATGGAAA  650

seq1  AGGAATGGCAAGAGGACTTATTATGAGCAAAACACAATAAAGTA  694
      ||||||||| ||||||||||||||||||||||||| ||||||||
seq2  AGGAATGGCTAGAGGACTTATTATGAGCAAAACAC-ATAAAGTA  693