BAC Information

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BAC

Clone NameB6Ng01-082E23
Chromosome7 (Build37)
Map Location 64,961,977 - 64,963,114
singlet/doubletsinglet
Overlap geneGabrb3
Upstream geneLOC100040839, Gabrg3, Gabra5
Downstream geneEG668807, LOC434189, Atp10a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082E23.bB6Ng01-082E23.g
ACCDH896900DH896901
length1,2351,143
definitionDH896900|Mus musculus domesticus DNA, BAC clone: B6Ng01-082E23, 5' end.DH896901|Mus musculus domesticus DNA, BAC clone: B6Ng01-082E23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttaatatatttcttccgaatgatggcaaactaggccatcttct
gctacatatgcagctagagacacgagctctgggggtactgattagttcat
attgttattccacctatagggttgcagaccccatcagctccttggatact
ttctctagctcctacattgggggccatatgttccatccaatagatgacta
tgagcatccacttctgtatttgccaggtactggcatagcctcacaagaga
cagctataccaggatcctttcagcaaaatcttgctagtgtatgcaatggt
gtcatcgtttggaggctgattatgggatggatccccggatatggcagtct
ctagatggtccatccttttgtctcagctccaaactttgtctctgtaactc
cttccatgggtgttttgttcccaattctaagaaggggcaaagtgtccaca
ctttggtcttcgttcttcttgagtttcatgtgttttgcaaattgtatctt
gtatcttgggtattctaagtttatgggctaatatccacttatcagtgagt
acatattgtgtgagttcttttgtgattgggttacctcactcaggatgatg
ccctccaggtccatccatttgcctaggaatttcataaattcattcttttt
aatagctgagtagtactccattgtgtaaatgtaccacattttctgtatcc
attcctctgttgaggggcatctgggttctttctagcttctggctattata
aataaggctgctatgaacatgtgtccttcttaccagttgaaacatcttct
ggatatatgcccaagagaggtactgtgggatcctctggtagtactatgtc
caattttctgaggaaccgccagacggatttctggagtggctgtacaagct
tgcaatcccaccaacaatggaggagtgttcctctttctccacatcctcgc
caacatatgctgtcacctgaatttttgatcttagccattctgactggtgg
tgagggtgaatcctcagattgtttttgaatttttatttcccttgacgatt
aagaactattgaactttttttttcagtgcttctcagccattcagcattcc
tccagtggaaaatctttgttagctctggtgccatttttttattggtaatt
gatttctggatcacactcttggatctgttataatggtaaataggctccat
cgattggaatggtagaaaatctctttcctcatagc
gaattcaagaatcacatcttcaaaccatcagtctttagtttaaatataga
acatggaaagagtggaaaatgaagcattacgttgattaagaagagcccat
cgatgtaaccaactgtttcccgaaggaaggcagcatctacagtgggtacc
agcttacactgaagcagtccagaagtctgaagcacacagcagtccctgaa
agcacactgtaatttatgtcccttgctaccctctgtgacagaaaaggtgg
aagagcctttttaaaagtgcactccagggtgcttgggcctctgaggggaa
agtgtgcattgaataagcaagtggcattaagaccctccaaatatggagct
gatgatgagaacagtgactgtctccatcgcaaccaaatgtgtgtaataaa
aaggtttgctgtactgaggtttaagccacccgatatcagatggtcaggga
gttgtaaaatcccaagtcaatttcctccatctccatgaacttctacattg
agtaaacatatctgagtaagagttgccaaatttagaacaaaaatcagctg
gcaactgcctgaaatgctttcacagcaaaatgtattccccaaatctggcc
aaattccaggcctgcttatcatgcagagagcagtcactttatgtcattca
acatctgtaaaccaacagggtgtgggtgctggagttcaccgtcttctgca
agcctttatttcctcaggtacaagcgaagtgagataggaattactggatc
caccacctaggtctgtagtagtgtaaaaaccaaatgtagccagacatgat
gaagcataatggtaacacacgcaaaatgaggcaggagggttgtggctccc
aggtatagcatgtaaatactagaggtgataaaaagcactagcaaagctgt
gtcctcacagaaaccacagcaggtcaaaacagaaagcgggacatttgaga
tgaacacgttgagtctcatgtttccactctccagctgagccactggaagg
tatgcttacctgtgtacacagccaacacacaccaaaccacacatgtataa
tattccaccatgcacatacctgcattccaagcaacataacacatataaat
ttcaccatgcctacctaggagaactgcatgtagaacctcctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_64961977_64963114
seq2: B6Ng01-082E23.g_69_1211 (reverse)

seq1  GTAGGA-GTACT-CATGCAG-TCTCCTAGGTAAGCAT-GTG-AATTTATA  45
      |||||| || || ||||||| ||||||||||| |||| ||| ||||||||
seq2  GTAGGAGGTTCTACATGCAGTTCTCCTAGGTAGGCATGGTGAAATTTATA  50

seq1  TGTG-TATG-TGCTTTGAATGCAGGTATGTGCATGTGTGAATATTATACA  93
      |||| |||| ||||| |||||||||||||||||||   ||||||||||||
seq2  TGTGTTATGTTGCTTGGAATGCAGGTATGTGCATGGTGGAATATTATACA  100

seq1  TGTGT-GTTTGGTGTGTGTT-GCTGTGTACACAGGTAAGCATACCTTCCA  141
      ||||| |||||||||||||| |||||||||||||||||||||||||||||
seq2  TGTGTGGTTTGGTGTGTGTTGGCTGTGTACACAGGTAAGCATACCTTCCA  150

seq1  GTGGCTCCAGCTGGAGAGTGGAAACATGAGACTCAACGTGTTCATCTCAA  191
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCT-CAGCTGGAGAGTGGAAACATGAGACTCAACGTGTTCATCTCAA  199

seq1  ATTGTCCCGCTTTTCTGTTTTGACCTGCTGTGGTTTCTGTGAGGACACAG  241
      | |||||||| |||||||||||||||||||||||||||||||||||||||
seq2  A-TGTCCCGC-TTTCTGTTTTGACCTGCTGTGGTTTCTGTGAGGACACAG  247

seq1  CTTTGCTAGTGCTTTTTATCACCTCTAGTATTTACATGCTATACCTGGGA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTAGTGCTTTTTATCACCTCTAGTATTTACATGCTATACCTGGGA  297

seq1  GCCACAACCCTCCTGCCTCATTTTTGCGTGTGTTACCATTATGCTTCATC  341
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GCCACAACCCTCCTGCCTCA-TTTTGCGTGTGTTACCATTATGCTTCATC  346

seq1  ATGTCTGGCTACATTTGGTTTTTACACTACTACAGACCTAGGTGGTGGAT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGGCTACATTTGGTTTTTACACTACTACAGACCTAGGTGGTGGAT  396

seq1  CCAGTAATTCCTATCTCACTTCGCTTGTACCTGAGGAAATAAAGGCTTGC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAATTCCTATCTCACTTCGCTTGTACCTGAGGAAATAAAGGCTTGC  446

seq1  AGAAGACGGTGAACTCCAGCACCCACACCCTGTTGGTTTACAGATGTTGA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACGGTGAACTCCAGCACCCACACCCTGTTGGTTTACAGATGTTGA  496

seq1  ATGACATAAAGTGACTGCTCTCTGCATGATAAGCAGGCCTGGAATTTGGC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATAAAGTGACTGCTCTCTGCATGATAAGCAGGCCTGGAATTTGGC  546

seq1  CAGATTTGGGGAATACATTTTGCTGTGAAAGCATTTCAGGCAGTTGCCAG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTGGGGAATACATTTTGCTGTGAAAGCATTTCAGGCAGTTGCCAG  596

seq1  CTGATTTTTGTTCTAAATTTGGCAACTCTTACTCAGATATGTTTACTCAA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTTTGTTCTAAATTTGGCAACTCTTACTCAGATATGTTTACTCAA  646

seq1  TGTAGAAGTTCATGGAGATGGAGGAAATTGACTTGGGATTTTACAACTCC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAAGTTCATGGAGATGGAGGAAATTGACTTGGGATTTTACAACTCC  696

seq1  CTGACCATCTGATATCGGGTGGCTTAAACCTCAGTACAGCAAACCTTTTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCATCTGATATCGGGTGGCTTAAACCTCAGTACAGCAAACCTTTTT  746

seq1  ATTACACACATTTGGTTGCGATGGAGACAGTCACTGTTCTCATCATCAGC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACACACATTTGGTTGCGATGGAGACAGTCACTGTTCTCATCATCAGC  796

seq1  TCCATATTTGGAGGGTCTTAATGCCACTTGCTTATTCAATGCACACTTTC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATTTGGAGGGTCTTAATGCCACTTGCTTATTCAATGCACACTTTC  846

seq1  CCCTCAGAGGCCCAAGCACCCTGGAGTGCACTTTTAAAAAGGCTCTTCCA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAGAGGCCCAAGCACCCTGGAGTGCACTTTTAAAAAGGCTCTTCCA  896

seq1  CCTTTTCTGTCACAGAGGGTAGCAAGGGACATAAATTACAGTGTGCTTTC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCTGTCACAGAGGGTAGCAAGGGACATAAATTACAGTGTGCTTTC  946

seq1  AGGGACTGCTGTGTGCTTCAGACTTCTGGACTGCTTCAGTGTAAGCTGGT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTGCTGTGTGCTTCAGACTTCTGGACTGCTTCAGTGTAAGCTGGT  996

seq1  ACCCACTGTAGATGCTGCCTTCCTTCGGGAAACAGTTGGTTACATCGATG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTGTAGATGCTGCCTTCCTTCGGGAAACAGTTGGTTACATCGATG  1046

seq1  GGCTCTTCTTAATCAACGTAATGCTTCATTTTCCACTCTTTCCATGTTCT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTTCTTAATCAACGTAATGCTTCATTTTCCACTCTTTCCATGTTCT  1096

seq1  ATATTTAAACTAAAGACTGATGGTTTGAAGATGTGATTCTTGAATTC  1138
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAAACTAAAGACTGATGGTTTGAAGATGTGATTCTTGAATTC  1143