BAC Information

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BAC

Clone NameB6Ng01-083H19
Chromosome7 (Build37)
Map Location 117,118,022 - 117,119,036
singlet/doubletsinglet
Overlap geneTmem41b
Upstream geneTub, Ric3, Lmo1, Stk33, EG668320, 1700095J03Rik, Trim66, Rpl27a, St5, LOC100042582, D930014E17Rik, BC051019, Ascl3, Tmem9b, 4930431P19Rik, Nrip3, Scube2, Phxr5, Rab6ip1
Downstream geneIpo7, AA474408, Zfp143, Wee1, Swap70, EG668368, Sbf2, LOC668246, Adm, B430319F04Rik, Ampd3, Rnf141, Xlkd1, Mrvi1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083H19.bB6Ng01-083H19.g
ACCDH897736DH897737
length1,0871,008
definitionDH897736|Mus musculus domesticus DNA, BAC clone: B6Ng01-083H19, 5' end.DH897737|Mus musculus domesticus DNA, BAC clone: B6Ng01-083H19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccttatacagagcaatcagaaatgcagtaggcttcttatctat
ttcttacctggaaacaccaaaagttgacttctcagtcccatgaggccggg
tgttgcagccagtactcagtataagctggaatcctgaagaagagtgagtc
ttccttcttcctccaatgtctttgtatgagcctccaggagaaggcatggc
tcagtctaaaggtgtgtaccaccacacctgggcctaaactgttctttact
tgaaacttaccctcccaggatgaccttgaactcagagagctgctttgcct
ctgtctcctgggattaaattcgtgttctccctcacctgggcctaaatttt
ccatgaccactgtgcctcaagatctggataaaaagtctgtgtcttccagc
ctcaagatctggatcagggggctggcaagatggcttagtgggtaagagca
ctgactgctcttctgaaggtcctgagttcaaaacccagcacccacatggt
ggctcaccaccacccataatgagatctgacatcctcttctggtacttctg
acgtcagctacagtgtacttatgtataataataaataaatcttaaaaaaa
agatctggatcacaggtgagccctccatttctcattcatttcatgtatag
tcaagtttacaactgggaagagccttcacacataccaacatggtgtatac
aacctccaaactatctaacttttgaaattattatacagcaagagtctaat
tttttgtctcctttatctctctcacacataccatgcatatacccaacagt
aagcaattaaaaacaaagtatcagaatggtatccaacaaagagtgataca
ttttaggatcttggggaaaaaatgcataattgtgtcagcaattaagagca
ctgtctgctcttccagaggacttggtccagttccaaggacccacatggca
actcacaacgttccatgggatctgatgccctcttctatcttccactaaca
caaggcacacatggtgcacagtcgtactgcagcaaaacactggttaatta
aatgaagcaaataggtgtgggggagggggttaggtgg
gaattccaaaccaagacaatgagtgatgtctcagagctaaccctggaaca
gtgactctcacaggtcaggtgcaggtgacagcacttctcatagggcccca
acttctgttctcccatatgtgcattctctctcatgggctattttacttta
caagtccttctttcagtgactgaagaggtgatgtccaaacgtaacatgaa
tacacctgctaatcctgagatgacagtggtggtggcaggagtgatggcgg
tggtaaaggaaaagccatgtcttttcactcaaacttctgctttagttgtt
tttggaagatggctggcaggatagaaagaagggccaaaaccatcagaata
aataccgagctccaggaaacagcttcccctgctgttgtaagctgatgcag
agttgttcctgccttgattgctacaaaagaaggaggtgcaacacctagaa
caaaaaacaagacaacagtgagagagtgaggagcagtggcagcctgtcac
gaaaagaaaagccaccattttttcatgtttgcatgttttgtgacaagtgt
atgtaagtgtaccgtgtgtacccagtgccagaagaggtcatcagatctag
agttacagacaggtgtgagcctccacttctaatctcagaacttgggaggc
agaggcaggagaatctctgtgaatttgaggccagcctggtctacatagca
agttagtcttggggctgcaaagatggctcagcagttaagagcaccagcag
gtcttccagaggaccttggttcaattcccaacacccacacagcagctcac
aaccacctgtaactctagttctaggggatccaacacacacgcaggcaaaa
caccaatgcacataaaataaaaaagtactttaaaaaaaagcaagtcaagc
cgggtatggtggtgcacgcctttgatcccagcacttgggagcagagacag
gcgatttctgagttcaagccagcctgtctacagagtgagtccagacagcc
aggttaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_117118022_117119036
seq2: B6Ng01-083H19.g_67_1074

seq1  GAATTCCAAACCAAGACAATGAGTGATGTCTCAGAGCTAACCCTGGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAACCAAGACAATGAGTGATGTCTCAGAGCTAACCCTGGAACA  50

seq1  GTGACTCTCACAGGTCAGGTGCAGGTGACAGCACTTCTCATAGGGCCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTCTCACAGGTCAGGTGCAGGTGACAGCACTTCTCATAGGGCCCCA  100

seq1  ACTTCTGTTCTCCCATATGTGCATTCTCTCTCATGGGCTATTTTACTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGTTCTCCCATATGTGCATTCTCTCTCATGGGCTATTTTACTTTA  150

seq1  CAAGTCCTTCTTTCAGTGACTGAAGAGGTGATGTCCAAACGTAACATGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCCTTCTTTCAGTGACTGAAGAGGTGATGTCCAAACGTAACATGAA  200

seq1  TACACCTGCTAATCCTGAGATGACAGTGGTGGTGGCAGGAGTGATGGCGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCTGCTAATCCTGAGATGACAGTGGTGGTGGCAGGAGTGATGGCGG  250

seq1  TGGTAAAGGAAAAGCCATGTCTTTTCACTCAAACTTCTGCTTTAGTTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAAGGAAAAGCCATGTCTTTTCACTCAAACTTCTGCTTTAGTTGTT  300

seq1  TTTGGAAGATGGCTGGCAGGATAGAAAGAAGGGCCAAAACCATCAGAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAGATGGCTGGCAGGATAGAAAGAAGGGCCAAAACCATCAGAATA  350

seq1  AATACCGAGCTCCAGGAAACAGCTTCCCCTGCTGTTGTAAGCTGATGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCGAGCTCCAGGAAACAGCTTCCCCTGCTGTTGTAAGCTGATGCAG  400

seq1  AGTTGTTCCTGCCTTGATTGCTACAAAAGAAGGAGGTGCAACACCTAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTCCTGCCTTGATTGCTACAAAAGAAGGAGGTGCAACACCTAGAA  450

seq1  CAAAAAACAAGACAACAGTGAGAGAGTGAGGAGCAGTGGCAGCCTGTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAACAAGACAACAGTGAGAGAGTGAGGAGCAGTGGCAGCCTGTCAC  500

seq1  GAAAAGAAAAGCCACCATTTTTTCATGTTTGCATGTTTTGTGACAAGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAAAGCCACCATTTTTTCATGTTTGCATGTTTTGTGACAAGTGT  550

seq1  ATGTAAGTGTACCGTGTGTACCCAGTGCCAGAAGAGGTCATCAGATCTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGTGTACCGTGTGTACCCAGTGCCAGAAGAGGTCATCAGATCTAG  600

seq1  AGTTACAGACAGGTGTGAGCCTCCACTTCTAATCTCAGAACTTGGGAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACAGACAGGTGTGAGCCTCCACTTCTAATCTCAGAACTTGGGAGGC  650

seq1  AGAGGCAGGAGAATCTCTGTGAATTTGAGGCCAGCCTGGTCTACATAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGGAGAATCTCTGTGAATTTGAGGCCAGCCTGGTCTACATAGCA  700

seq1  AGTTAGTCTTGGGGCTGCAAAGATGGCTCAGCAGTTAAGAGCACCAGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTCTTGGGGCTGCAAAGATGGCTCAGCAGTTAAGAGCACCAGCAG  750

seq1  GTCTTCCAGAGGACCTTGGTTCAATTCCCAACACCCACACAGCAGCTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCCAGAGGACCTTGGTTCAATTCCCAACACCCACACAGCAGCTCAC  800

seq1  AACCACCTGTAACTCTAGTTCTAGGGGATCCAACACACACGCAGGCAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCTGTAACTCTAGTTCTAGGGGATCCAACACACACGCAGGCAAAA  850

seq1  CACCAATGCACATAAAATAAAAAAGTACTTTAAAAAAAAGCAAGTCAAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAATGCACATAAAATAAAAAAGTACTTTAAAAAAAAGCAAGTCAAGC  900

seq1  CGGGTATGGTGGTGCACGCCTTTGATCCCAGCACTTGGGAGGCAGAGACA  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CGGGTATGGTGGTGCACGCCTTTGATCCCAGCACTTGGGA-GCAGAGACA  949

seq1  GGCGGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGG  1000
      ||| ||||||||||||||| |||||||| |||||||||||||| |||| |
seq2  GGC-GATTTCTGAGTTCAA-GCCAGCCT-GTCTACAGAGTGAG-TCCA-G  994

seq1  ACAGCCAGGGTTACA  1015
      ||||||| |||||||
seq2  ACAGCCA-GGTTACA  1008