BAC Information

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BAC

Clone NameB6Ng01-084D23
Chromosome7 (Build37)
Map Location 86,254,169 - 86,255,246
singlet/doubletsinglet
Overlap geneAcan
Upstream geneA330068G13Rik, Ntrk3, Mrpl46, Mrps11, Det1, Isg20l1, Isg20
Downstream geneHapln3, Mfge8, Abhd2, Rlbp1, BC025462, Polg, AI854517, Rhcg, 5730590G19Rik, Plin, Pex11a, EG626359, EG665900, Mesp1, Mesp2, Anpep, Ap3s2, 2610034B18Rik, Zfp710, Idh2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084D23.bB6Ng01-084D23.g
ACCDH898265DH898266
length1,0931,079
definitionDH898265|Mus musculus domesticus DNA, BAC clone: B6Ng01-084D23, 5' end.DH898266|Mus musculus domesticus DNA, BAC clone: B6Ng01-084D23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccattctcaagtcttggattgtcttagttgcttttctcagccttt
tctgtgtgttttcttgggcttcagtctaagctgtatttcccttaaactca
ttctccttcattccattgagctgtttcttgagtcttctttaaactccttg
aatgctctgatgaagttagtgattgttcttctaaattctgcatcctggga
ttcatctaggaaattctccttggcagacatttcaacttaactgctaggtt
tgggaaagaagaaactggcttgatcttctgtactgctggtgtttctgcaa
tgagatctgggcatgtggacttctgttggttctgagtctgttattgacag
agcagagtggggcagagagaggatgcgcaggtatgtcagacctagaattg
gaaatggactgaagtggacagtaaggtggacagagggtactgggctggta
gacaggaggggcttcctgatccaagcctggggtgtggggatagatctgac
tgggtggaaaggttgactgtgttgtaggagaggcttgtgggttaggggat
tggtaaggagggtcctaacaaaagtctagagatcctttgcaatgcaagca
ggggaggcaagactaggccagggcactgtatgtgggtcctaggctagatc
tcgtgggttgcagaaagttaagggaaggagaaggtcaaggagactcagta
ggtcctggaggaggagctaggatgtctggtcttaccattgttttggagtc
ttaagctagtaagtctgctatctggaaactcaacaagtctgaatttgtct
cttttttcctcttcttccccctcctcctcttcctcctccatgtcttcagt
gtatgtcagatttctgtttttcccctgttaactataacttttcactgaaa
actgtctatttaggtaatatacaactttaggttttatttcattttggttt
ttgagacaggtctttgtagccctggctgtcctggaacctcctatgtagac
cagagtgccttgacctcacggggatccactctgccttcttgtctgaacat
gtacaggtaaaaaatgtggtggtccacctaagcctggcttgga
gaattccacgttccttggaggcattgccaagggtacagctgacagatgtg
catagggcttctgtagtaaggttgggacactcatctttcctgcagcctcc
tgccttctacgtataccccaagaagtcaggtgcatgggggtctcagccgg
gcaggaatagagtacaaggattttccctccaaaatgccacatgggagaaa
gggctggaaaatccacacagacaacagctctggaacttaccttggaaaga
gagcctgtgctccaaaagggactgggtgcaacaggggccaggctgtgcct
tatagaccaggaaagtggttccagagccacccacctgagccctaggccta
agtgcccagcaggacaaggctctgtcacaacctggttgcaatgcctcatg
ggatcttgtgtcttgcttgtctcaggtatcattgccttttctagccattt
tggaagtctgtctatgttcactacctctactggcatggtcctcccaacat
gcccagctccttccctccctgaccctccctgcccagctcagccctcaggt
tctgaggcgtcacaagccctggccaacaggcctgggatggcatctctgtc
tcagtgctgagcatcctctaaggcctccttggcctctttccagattttta
tcctggcccttgaggaaggcactggtatgagggggaccctcttcctcctg
gcctctactctgcctctttcttctccaacagccaaccttctgctccccct
ctttccctttctagcctttccaagcacccaccccatagcccaaagaagat
ccctttcccctcggaaactcccttttccttcctgggacagcccagattag
tgaaaccacctagtttgggaagctgccactcattcctgagatatctgtgg
ccactccctgagccccagggtcttcctccctccatatggaggccgcaggc
aaaagaagaaaaagatggatttagagttccctctgtccagtgctctctct
actgaaagatgttaactactggagctcacagaggagagggagtctgaatg
aaggcttcttttcagtctgagatgcaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_86254169_86255246
seq2: B6Ng01-084D23.g_70_1148

seq1  GAATTCCACGTTCCTTGGAGGCATTGCCAAGGGTACAGCTGACAGATGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACGTTCCTTGGAGGCATTGCCAAGGGTACAGCTGACAGATGTG  50

seq1  CATAGGGCTTCTGTAGTAAGGTTGGGACACTCATCTTTCCTGCAGCCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGGCTTCTGTAGTAAGGTTGGGACACTCATCTTTCCTGCAGCCTCC  100

seq1  TGCCTTCTACGTATACCCCAAGAAGTCAGGTGCATGGGGGTCTCAGCCGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCTACGTATACCCCAAGAAGTCAGGTGCATGGGGGTCTCAGCCGG  150

seq1  GCAGGAATAGAGTACAAGGATTTTCCCTCCAAAATGCCACATGGGAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAATAGAGTACAAGGATTTTCCCTCCAAAATGCCACATGGGAGAAA  200

seq1  GGGCTGGAAAATCCACACAGACAACAGCTCTGGAACTTACCTTGGAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGAAAATCCACACAGACAACAGCTCTGGAACTTACCTTGGAAAGA  250

seq1  GAGCCTGTGCTCCAAAAGGGACTGGGTGCAACAGGGGCCAGGCTGTGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGTGCTCCAAAAGGGACTGGGTGCAACAGGGGCCAGGCTGTGCCT  300

seq1  TATAGACCAGGAAAGTGGTTCCAGAGCCACCCACCTGAGCCCTAGGCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGACCAGGAAAGTGGTTCCAGAGCCACCCACCTGAGCCCTAGGCCTA  350

seq1  AGTGCCCAGCAGGACAAGGCTCTGTCACAACCTGGTTGCAATGCCTCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCCAGCAGGACAAGGCTCTGTCACAACCTGGTTGCAATGCCTCATG  400

seq1  GGATCTTGTGTCTTGCTTGTCTCAGGTATCATTGCCTTTTCTAGCCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTGTGTCTTGCTTGTCTCAGGTATCATTGCCTTTTCTAGCCATTT  450

seq1  TGGAAGTCTGTCTATGTTCACTACCTCTACTGGCATGGTCCTCCCAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTCTGTCTATGTTCACTACCTCTACTGGCATGGTCCTCCCAACAT  500

seq1  GCCCAGCTCCTTCCCTCCCTGACCCTCCCTGCCCAGCTCAGCCCTCAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGCTCCTTCCCTCCCTGACCCTCCCTGCCCAGCTCAGCCCTCAGGT  550

seq1  TCTGAGGCGTCACAAGCCCTGGCCAACAGGCCTGGGATGGCATCTCTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGCGTCACAAGCCCTGGCCAACAGGCCTGGGATGGCATCTCTGTC  600

seq1  TCAGTGCTGAGCATCCTCTAAGGCCTCCTTGGCCTCTTTCCAGATTTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGCTGAGCATCCTCTAAGGCCTCCTTGGCCTCTTTCCAGATTTTTA  650

seq1  TCCTGGCCCTTGAGGAAGGCACTGGTATGAGGGGGACCCTCTTCCTCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCCCTTGAGGAAGGCACTGGTATGAGGGGGACCCTCTTCCTCCTG  700

seq1  GCCTCTACTCTGCCTCTTTCTTCTCCAACAGCCAACCTTCTGCTCCCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTACTCTGCCTCTTTCTTCTCCAACAGCCAACCTTCTGCTCCCCCT  750

seq1  CTTTCCCTTTCTAGCCTTTCCAAGCACCCACCCCATAGCCCAAAGAAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCTTTCTAGCCTTTCCAAGCACCCACCCCATAGCCCAAAGAAGAT  800

seq1  CCC-TTCCCCTCGGAAACTCCC-TATCCTTCCTGGGACAG-CCAGATTAG  847
      ||| |||||||||||||||||| | ||||||||||||||| |||||||||
seq2  CCCTTTCCCCTCGGAAACTCCCTTTTCCTTCCTGGGACAGCCCAGATTAG  850

seq1  TGAAACCACCTAGTTT-GGAAGCTGCCACTCA-TCCTGAGATATCTGTGG  895
      |||||||||||||||| ||||||||||||||| |||||||||||||||||
seq2  TGAAACCACCTAGTTTGGGAAGCTGCCACTCATTCCTGAGATATCTGTGG  900

seq1  CCACTCCCTGAGCCCCAGGGTCCTCC-CCCTCCATATGGAGGCCGCAGGC  944
      |||||||||||||||||||||| ||| |||||||||||||||||||||||
seq2  CCACTCCCTGAGCCCCAGGGTCTTCCTCCCTCCATATGGAGGCCGCAGGC  950

seq1  -AAAGAAGGAAAAAAGATGGATTTAGAGTTCCCTCTGTCCAGTGCTCTCT  993
       |||||||  ||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAG--AAAAAGATGGATTTAGAGTTCCCTCTGTCCAGTGCTCTCT  998

seq1  CTACTGACAGATGTTTAACTACTGGAGCTCACAGAGGAGAGGGAGTCCTG  1043
      ||||||| ||||| |||||||||||||||||||||||||||||||| |||
seq2  CTACTGAAAGATG-TTAACTACTGGAGCTCACAGAGGAGAGGGAGT-CTG  1046

seq1  ACAGGAGGCTTCTTTCCAGTCCTGAGATGGCAACC  1078
      |  | |||||||||| |||| ||||||| ||||||
seq2  AATGAAGGCTTCTTTTCAGT-CTGAGAT-GCAACC  1079