BAC Information

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BAC

Clone NameB6Ng01-086H08
Chromosome7 (Build37)
Map Location 113,794,987 - 113,796,130
singlet/doubletsinglet
Overlap genenone
Upstream geneDnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108, EG668117, Gvin1, LOC672660, LOC100042097, LOC668128, LOC634394, EG209380, EG668139, Gm1966, LOC100042141
Downstream geneOlfr693, Olfr694, Olfr695, Olfr696-ps1, Olfr697, Olfr698, Olfr699, Olfr700, Olfr701, Olfr702, Olfr703, Olfr704, Olfr705, Olfr706, Olfr707, Olfr708, Olfr709-ps1, Olfr710, LOC384651, Olfr6, Olfr711, GA_x5J8B7W6B6J-1784824-1783474, Olfr2, Olfr713, Olfr714, Olfr17, Olfr715, Olfr716, Nlrp14, LOC100042278, 1700012H05Rik, Syt9, Olfml1, Ppfibp2, 5330417H12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086H08.bB6Ng01-086H08.g
ACCDH899850DH899851
length1,2591,130
definitionDH899850|Mus musculus domesticus DNA, BAC clone: B6Ng01-086H08, 5' end.DH899851|Mus musculus domesticus DNA, BAC clone: B6Ng01-086H08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctttttgaatctatatccaaaattttaacaagctatttctttt
cttagtatctaatttcttgagtttttaaaatattttcagatattagccat
ttatttatcttcactaatttattcattttacagcccaattagggccactg
cacttcagttcctccaagtcctacccataaacctcctcccccattccttc
accccttctgtaccagtgagttcaaagctatttccccactttcttttctt
tcagattcagtgtaactggtttattttgagaacattgaactacttagact
tgagttttgtgcagggtgatgagcatagatctatttgcatgtttctacta
acagacatccaatttggccagtatgaatgttgaagaggctgtttttaccc
cagggtatatttctggcctctctatcaaaattgtgtgtccatatgtgtat
taattagggttccctagattcacagaacttatggaatgcctcaatatatt
tagggaatttattgtaatgacttacagtctcagtccaattgacccaacaa
tggggagccctcaatgggaagtctaagaatctaacagttgctcaatccca
tgaggctagttgtttcagctgtttttctgtataagctggaattctgaaga
aataagatgtgctggcaagtaagtccaagcaggtgaagaagagtgaattt
tctttcttccaatgtccttatattggcctccagcagaaagtgtggcccag
atgaaaggtgtgcacctccactcctggatttggaacttgatttgacctgg
gctggccttgaattcagagacctacttgcctcagtctcctgggattaagg
tatgtactactttccttgggcctgagctattcatggcaaccatgactcaa
gatttggatgaaaagcatgtgtcatcccatgacaagatgtggatccagca
gccaaacattacactgaatgagggaccccagtggagaaattagggcagga
ctgaaggagctgaagtggtttgcaccacatagaaagatctgttgtgaaag
gaaatgttagtgatcctccaacgaacagaagctggatctgatgtactcaa
gcaggtctttatttctagctcagcctgcccaatgcaccactgtcatcaga
tgtttttggtggtggggagctcgatgctatgagcgagcctttagtagatc
agcgaagatcatggaagctctattggagcactgtgccttacaataaatgc
ctgtcctga
gaattcagatatttatctatagaaaaataatcacctttgtaatgtgtaga
ttagcagggggtaaggaaggtacttggctgtttccagaggagactgcact
tgcttcttactagcatatggtctggctttttgcataactgttatctaaag
tggcctttagagctcagcccatcccaagataaatgaggtaaagcagtttt
ctcctttcctcctgactccactgtacattagatgccctcatctacaaaca
atagtgttgagaacttgttaagctttcacagtgctctgaacataacagaa
agaaggactgtgctatcaagtcttcttacttcaacagtttgagcagtgta
taaatttggggagtaacagcaaaagaaaaattagaagaaacaagaaaatg
taaggaaaaagagcttgcaaaagaaataggttaatcaacagacatccagc
taactggcactccccttttgcctgtgttttaaaaataggcatttctgaga
aatgggctttgactaggaaatgaaactgttgagcaaatggtggggactgg
cctaaaagataagaggaagttattagcagaagtttatggggagaaaaggc
taaaaatttttctacaaggctgactgattagaaccaaactaatttggaca
gttggaatgttgtatgtctctcaagttgctgtgggctgtcttagtcccta
aacagtcatttgtgtccacttctgtacttgacctaacaatcttgtaacta
ttaggtatttcagaaaactcacgcaaacccctaacttctaccaactgaaa
aggttttaagtgccatcatataggatctattgctcaaaacagacattgcc
tcactcactcatgtttcttttggctaatgtgtttgagaagaccaggagaa
gtttaaaaatgtaaactcagccacccaagtagagctcatgagactgcaga
tgaggagtagcatagaatagtgcttaaagaagctaggtaaagtgtaagtg
catctagtcagctgtaagaaaggccatacatcaagaaatgtggagtctag
aagaggcctgtgtaagaacctgccctgcatgggtctgaagggctgaagct
agatgcctgaaaagactccttaagtgaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_113794987_113796130
seq2: B6Ng01-086H08.g_67_1196 (reverse)

seq1  GCTTCACTTATGAGGTCTTCTCAGGCATTCCCTTAGCCTCAGCCCCTTCA  50
      |||||||||| |  ||||| ||||||||     |||| |||| |||||||
seq2  GCTTCACTTAAGGAGTCTTTTCAGGCAT----CTAGCTTCAG-CCCTTCA  45

seq1  GACCCATTGCAGGGCAGGTTCTCTACACAGCCCTCTTCCTAGAACCTCTC  100
      |||||| ||||||||||||||| ||||||| |||||| |||||  ||| |
seq2  GACCCA-TGCAGGGCAGGTTCT-TACACAGGCCTCTT-CTAGA--CTC-C  89

seq1  ACATTTCTTGATGTATGGCCTGTCTTACAGCTGACTAGATGCACTTACAA  150
      ||||||||||||||||||||| ||||||||||||||||||||||||||| 
seq2  ACATTTCTTGATGTATGGCCTTTCTTACAGCTGACTAGATGCACTTACA-  138

seq1  CCTTTACCTAGCTTCTTTAAGCACTATTCTATGCCTACTCCTCATCCTGC  200
       |||||||||||||||||||||||||||||||| ||||||||||| ||||
seq2  -CTTTACCTAGCTTCTTTAAGCACTATTCTATG-CTACTCCTCAT-CTGC  185

seq1  AGTCTCATGAGCTCTACTTGGGTGGCTGAGTTTACATTTTTAAACTTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCATGAGCTCTACTTGGGTGGCTGAGTTTACATTTTTAAACTTCTC  235

seq1  CTGGTCTTCTCAAACACATTAGCCAAAAGAAACATGAGTGAGTGAGGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTTCTCAAACACATTAGCCAAAAGAAACATGAGTGAGTGAGGCAA  285

seq1  TGTCTGTTTTGAGCAATAGATCCTATATGATGGCACTTAAAACC-TTTCA  349
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGTCTGTTTTGAGCAATAGATCCTATATGATGGCACTTAAAACCTTTTCA  335

seq1  GTTGGTAGAAGTTAGGGGTTTGCCTGAGTTTTCTGAAATACCTAATAGTT  399
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTTGGTAGAAGTTAGGGGTTTGCGTGAGTTTTCTGAAATACCTAATAGTT  385

seq1  ACAAGATTGTTAGGTCAAGTACAGAAGTGGACACAAATGACTGTTTAGGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATTGTTAGGTCAAGTACAGAAGTGGACACAAATGACTGTTTAGGG  435

seq1  ACTAAGACAGCCCACAGCAACTTGAGAGACATACAACATTCCAACTGTCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGACAGCCCACAGCAACTTGAGAGACATACAACATTCCAACTGTCC  485

seq1  AAATTAGTTTGGTTCTAATCAGTCAGCCTTGTAGAAAAATTTTTAGCCTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGTTTGGTTCTAATCAGTCAGCCTTGTAGAAAAATTTTTAGCCTT  535

seq1  TTCTCCCCATAAACTTCTGCTAATAACTTCCTCTTATCTTTTAGGCCAGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCCATAAACTTCTGCTAATAACTTCCTCTTATCTTTTAGGCCAGT  585

seq1  CCCCACCATTTGCTCAACAGTTTCATTTCCTAGTCAAAGCCCATTTCTCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCATTTGCTCAACAGTTTCATTTCCTAGTCAAAGCCCATTTCTCA  635

seq1  GAAATGCCTATTTTTAAAACACAGGCAAAAGGGGAGTGCCAGTTAGCTGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCCTATTTTTAAAACACAGGCAAAAGGGGAGTGCCAGTTAGCTGG  685

seq1  ATGTCTGTTGATTAACCTATTTCTTTTGCAAGCTCTTTTTCCTTACATTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGTTGATTAACCTATTTCTTTTGCAAGCTCTTTTTCCTTACATTT  735

seq1  TCTTGTTTCTTCTAATTTTTCTTTTGCTGTTACTCCCCAAATTTATACAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTTCTTCTAATTTTTCTTTTGCTGTTACTCCCCAAATTTATACAC  785

seq1  TGCTCAAACTGTTGAAGTAAGAAGACTTGATAGCACAGTCCTTCTTTCTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAAACTGTTGAAGTAAGAAGACTTGATAGCACAGTCCTTCTTTCTG  835

seq1  TTATGTTCAGAGCACTGTGAAAGCTTAACAAGTTCTCAACACTATTGTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTCAGAGCACTGTGAAAGCTTAACAAGTTCTCAACACTATTGTTT  885

seq1  GTAGATGAGGGCATCTAATGTACAGTGGAGTCAGGAGGAAAGGAGAAAAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATGAGGGCATCTAATGTACAGTGGAGTCAGGAGGAAAGGAGAAAAC  935

seq1  TGCTTTACCTCATTTATCTTGGGATGGGCTGAGCTCTAAAGGCCACTTTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTACCTCATTTATCTTGGGATGGGCTGAGCTCTAAAGGCCACTTTA  985

seq1  GATAACAGTTATGCAAAAAGCCAGACCATATGCTAGTAAGAAGCAAGTGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACAGTTATGCAAAAAGCCAGACCATATGCTAGTAAGAAGCAAGTGC  1035

seq1  AGTCTCCTCTGGAAACAGCCAAGTACCTTCCTTACCCCCTGCTAATCTAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCCTCTGGAAACAGCCAAGTACCTTCCTTACCCCCTGCTAATCTAC  1085

seq1  ACATTACAAAGGTGATTATTTTTCTATAGATAAATATCTGAATTC  1144
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTACAAAGGTGATTATTTTTCTATAGATAAATATCTGAATTC  1130