BAC Information

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BAC

Clone NameB6Ng01-089P18
Chromosome7 (Build37)
Map Location 14,362,495 - 14,498,518
singlet/doubletdoublet
Overlap geneLOC100043194, Sult2a1, EG620627, EG434121
Upstream geneEG232875, LOC100043128, LOC100042515, Zfp329, Zfp110, Zfp128, Zscan22, Rps5, 2310014L17Rik, 1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243, 9230107M04Rik, EG666256, LOC666267, LOC100042624
Downstream geneEG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik, EG194588, LOC666352, EG666312
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089P18.bB6Ng01-089P18.g
ACCDH902412DH902413
length1,0851,195
definitionDH902412|Mus musculus domesticus DNA, BAC clone: B6Ng01-089P18, 5' end.DH902413|Mus musculus domesticus DNA, BAC clone: B6Ng01-089P18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,362,495 - 14,363,537)(14,497,328 - 14,498,518)
sequence
gaattctttatattttctttaatatagccctctggggaattaaaattaac
ttatgtgatgatacagaaagaaagtaatgtgatagagaaaagaatggctt
ctattgtctttcctgttggattcaaatacacatccatcactgtcatactg
ataacatctcaaagactaatttttcctcatcagcaaaataggagcattgc
ctatacctttctcaggtattcacgaatttatttaacaatcccacactgag
tatgtcctctaagtgtggaactctttgtaaaatgaaccatttagtaattt
caataacactttcttttcaaatatattagatgcatattctgtgtgtatat
tcaaagaataaatgcatggtacacataacagtgtcacagctaggaaataa
agcagggatggggcctgctggtttgtaaatggtggaaagatgggaagaga
cgtttacagtgtcattaataaagagacaaagagaaagatgtaattatatg
aaaaatattagctctctattgtaaaggaatatacagtttgggcagtttgt
taatctttaaggtttaaaacattatttaaatttaaaaaattatttaaaat
atttaaaaaattatttaaatttaaagacattctggaatagatatatggtc
agaagacacagtgctacataggaccggtgctgaaattacacagatcttca
tgcattaccaaacaccatggatgaatgaaacagagtcctgcaattccctc
agctgggaagggctgggtctactgtatttggtgagaaaatcaagatagtt
gaaatgccgcagataactgtgtgtatctgcatcactgatgaacccacaca
cacataagtagaaactactttaaaatattagttaaaagttgatttaaaat
catttacttctataagtaaatattaaagatgtagacagaacagttgaagt
ctgcttgaatcattgagatgataaaactgggtgagttggatacatgatag
gaacagtttaatgggaagcagaataatctgagtataatattaaaaagatc
aagccagtgttgctgctgttagattgtcttagcat
gaattcactagacatatttccccatatcctttaattgctcgtatctcaag
acacaagaaattatcttttattgcctctggagagctactttgtcagcttt
atcccagaggctcaatcattcaagttcttgaaatgcatccatttttaatc
tccaagcaatgatttttccacgtgcaattatagtcattgtaattcaatat
ttaggctctgtgggaattcatactagagagatattcagctactgtttggt
tgacaagactttgtaaagacaatgccacaatcaagacttgtataggaaat
atattctggcaaccctcaaaattcccagccttcattacttcacagtatat
ttttaatggacatagtagttgggccattaatcattttcactggtatcttc
agaagacattaattagagtcaaaagaggaagatgacccaaggacagagga
agaagcctgccatcatcagcccaaaaagaaagtcctacaaaggtttggac
agtactctgatgtgagatctgcagcctccagaactatgaggaagttcttt
ttcaacaagagttaagccaccacatgttagggttatcctgccatctgata
cacaaaagtttcgggagatttttagaaacaagaaaaaaaataaaagtgca
tcaataaggtgcatagaatttgcacataggtgaacttacaactgcatgtg
tgtacctccaaagatgtggtttctcagatggactgatttattccattggg
aatccatattgaatttgttgaggtgcttgtagtctagcatctatctgatt
tggcttatcaggacccaagcatgctctcaaaaacaataagaaaatgtgtt
ctaataaagaaaataaagaacctgagagcacagtggatattaataggtac
ccatttcattagatgacacttttatattcatatcaattatagtatattat
tttaatatgctgtattagggatttacattttcatgaattctttatatttt
tctttatatagtcctctgaggatttaaaattaacttatgttggatgaaac
aggaaagatgtaatgttgataaaggaaaagaatggcttcttattgtcatt
cttttttggattcaaaccatcatcactgtcatactgataaacacatctaa
agactaaatttctctctcggaaaaataggagcattggcctatacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_14362495_14363537
seq2: B6Ng01-089P18.b_87_1130

seq1  AAAATTAACTTATGTGATGATACAGAAAGAAAGTAATGTGATAGAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAACTTATGTGATGATACAGAAAGAAAGTAATGTGATAGAGAAAA  50

seq1  GAATGGCTTCTATTGTCTTTCCTGTTGGATTCAAATACACATCCATCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCTTCTATTGTCTTTCCTGTTGGATTCAAATACACATCCATCACT  100

seq1  GTCATACTGATAACATCTCAAAGACTAATTTTTCCTCATCAGCAAAATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATACTGATAACATCTCAAAGACTAATTTTTCCTCATCAGCAAAATAG  150

seq1  GAGCATTGCCTATACCTTTCTCAGGTATTCACGAATTTATTTAACAATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATTGCCTATACCTTTCTCAGGTATTCACGAATTTATTTAACAATCC  200

seq1  CACACTGAGTATGTCCTCTAAGTGTGGAACTCTTTGTAAAATGAACCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGAGTATGTCCTCTAAGTGTGGAACTCTTTGTAAAATGAACCATT  250

seq1  TAGTAATTTCAATAACACTTTCTTTTCAAATATATTAGATGCATATTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATTTCAATAACACTTTCTTTTCAAATATATTAGATGCATATTCTG  300

seq1  TGTGTATATTCAAAGAATAAATGCATGGTACACATAACAGTGTCACAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATATTCAAAGAATAAATGCATGGTACACATAACAGTGTCACAGCT  350

seq1  AGGAAATAAAGCAGGGATGGGGCCTGCTGGTTTGTAAATGGTGGAAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATAAAGCAGGGATGGGGCCTGCTGGTTTGTAAATGGTGGAAAGAT  400

seq1  GGGAAGAGACGTTTACAGTGTCATTAATAAAGAGACAAAGAGAAAGATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAGACGTTTACAGTGTCATTAATAAAGAGACAAAGAGAAAGATGT  450

seq1  AATTATATGAAAAATATTAGCTCTCTATTGTAAAGGAATATACAGTTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATATGAAAAATATTAGCTCTCTATTGTAAAGGAATATACAGTTTGG  500

seq1  GCAGTTTGTTAATCTTTAAGGTTTAAAACATTATTTAAATTTAAAAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTGTTAATCTTTAAGGTTTAAAACATTATTTAAATTTAAAAAATT  550

seq1  ATTTAAAATATTTAAAAAATTATTTAAATTTAAAGACATTCTGGAATAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAATATTTAAAAAATTATTTAAATTTAAAGACATTCTGGAATAGA  600

seq1  TATATGGTCAGAAGACACAGTGCTACATAGGACCGGTGCTGAAATTACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGGTCAGAAGACACAGTGCTACATAGGACCGGTGCTGAAATTACAC  650

seq1  AGATCTTCATGCATTACCAAACACCATGGATGAATGAAACAGAGTCCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTCATGCATTACCAAACACCATGGATGAATGAAACAGAGTCCTGC  700

seq1  AATTCCCTCAGCTGGGAAGGGCTGGGTCTACTGTATTTGGTGAGAAAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCCTCAGCTGGGAAGGGCTGGGTCTACTGTATTTGGTGAGAAAATC  750

seq1  AAGATAGTTGAAATGCCGCAGATAACTGTGTGTATCTGCATCACTGATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAGTTGAAATGCCGCAGATAACTGTGTGTATCTGCATCACTGATGA  800

seq1  ACCCACACACACATAAGTAGAAACTACTTTAAAATATTAGTTAAAAGTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACACACACATAAGTAGAAACTACTTTAAAATATTAGTTAAAAGTTG  850

seq1  ATTTAAAATCATTTACTTCTATAAGTAAATATT-AAGATGTAGACAGAAC  899
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATTTAAAATCATTTACTTCTATAAGTAAATATTAAAGATGTAGACAGAAC  900

seq1  AGTTGAAGTCTGCTTGAATCATTGAGATGATAAAAACTGGTGAGTTGGAT  949
      |||||||||||||||||||||||||||||||||||   ||||||||||||
seq2  AGTTGAAGTCTGCTTGAATCATTGAGATGATAAAACTGGGTGAGTTGGAT  950

seq1  AACATGATAGGAACAGGTTTAATGGGAAGCAGGAATAATCTGAGTAT-AT  998
       |||||||||||||| ||||||||||||||| ||||||||||||||| ||
seq2  -ACATGATAGGAACA-GTTTAATGGGAAGCA-GAATAATCTGAGTATAAT  997

seq1  A-TAAAAAGATCAAGCCAGTGTTGCTGCTGTTAGATTGTC-TAGCAT  1043
      | |||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATTAAAAAGATCAAGCCAGTGTTGCTGCTGTTAGATTGTCTTAGCAT  1044

seq1: chr7_14497328_14498518
seq2: B6Ng01-089P18.g_70_1264 (reverse)

seq1  GGTATAGG-CAATGCTCCTATTTTTCTGATGAGGAAAATTTAGTCTTTGA  49
      |||||||| ||||||||||||||||| || |||  ||||||||||||| |
seq2  GGTATAGGCCAATGCTCCTATTTTTCCGA-GAGAGAAATTTAGTCTTT-A  48

seq1  GATG---TTATCAGTATGACAGTGATTGATGTGTATTTGAATCC-AAAAG  95
      ||||   |||||||||||||||||| |||||    ||||||||| |||| 
seq2  GATGTGTTTATCAGTATGACAGTGA-TGATG---GTTTGAATCCAAAAAA  94

seq1  GAATGACAAT-AGAAGCCATTCTTTT-CTTTATC-ACATTACATTCTTTC  142
      |||||||||| ||||||||||||||| ||||||| |||||||||  || |
seq2  GAATGACAATAAGAAGCCATTCTTTTCCTTTATCAACATTACATCTTTCC  144

seq1  TGTGTCATC--ACATAAGTTAATTTTAATTCCTCAGAGGACTATATTAAA  190
      ||| |||||  ||||||||||||||||| ||||||||||||||||| || 
seq2  TGTTTCATCCAACATAAGTTAATTTTAAATCCTCAGAGGACTATATAAAG  194

seq1  GAAAATATAAAGAATTCATGAAAATGTAAATCCCTAATACAGCATATTAA  240
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATAAAGAATTCATGAAAATGTAAATCCCTAATACAGCATATTAA  244

seq1  AATAATATACTATAATTGATATGAATATAAAAGTGTCATCTAATGAAATG  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATATACTATAATTGATATGAATATAAAAGTGTCATCTAATGAAATG  294

seq1  GGTACCTATTAATATCCACTGTGCTCTCAGGTTCTTTATTTTCTTTATTA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCTATTAATATCCACTGTGCTCTCAGGTTCTTTATTTTCTTTATTA  344

seq1  GAACACATTTTCTTATTGTTTTTGAGAGCATGCTTGGGTCCTGATAAGCC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACATTTTCTTATTGTTTTTGAGAGCATGCTTGGGTCCTGATAAGCC  394

seq1  AAATCAGATAGATGCTAGACTACAAGCACCTCAACAAATTCAATATGGAT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGATAGATGCTAGACTACAAGCACCTCAACAAATTCAATATGGAT  444

seq1  TCCCAATGGAATAAATCAGTCCATCTGAGAAACCACATCTTTGGAGGTAC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATGGAATAAATCAGTCCATCTGAGAAACCACATCTTTGGAGGTAC  494

seq1  ACACATGCAGTTGTAAGTTCACCTATGTGCAAATTCTATGCACCTTATTG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGCAGTTGTAAGTTCACCTATGTGCAAATTCTATGCACCTTATTG  544

seq1  ATGCACTTTTATTTTTTTTCTTGTTTCTAAAAATCTCCCGAAACTTTTGT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACTTTTATTTTTTTTCTTGTTTCTAAAAATCTCCCGAAACTTTTGT  594

seq1  GTATCAGATGGCAGGATAACCCTAACATGTGGTGGCTTAACTCTTGTTGA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAGATGGCAGGATAACCCTAACATGTGGTGGCTTAACTCTTGTTGA  644

seq1  AAAAGAACTTCCTCATAGTTCTGGAGGCTGCAGATCTCACATCAGAGTAC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACTTCCTCATAGTTCTGGAGGCTGCAGATCTCACATCAGAGTAC  694

seq1  TGTCCAAACCTTTGTAGGACTTTCTTTTTGGGCTGATGATGGCAGGCTTC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAAACCTTTGTAGGACTTTCTTTTTGGGCTGATGATGGCAGGCTTC  744

seq1  TTCCTCTGTCCTTGGGTCATCTTCCTCTTTTGACTCTAATTAATGTCTTC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTGTCCTTGGGTCATCTTCCTCTTTTGACTCTAATTAATGTCTTC  794

seq1  TGAAGATACCAGTGAAAATGATTAATGGCCCAACTACTATGTCCATTAAA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATACCAGTGAAAATGATTAATGGCCCAACTACTATGTCCATTAAA  844

seq1  AATATACTGTGAAGTAATGAAGGCTGGGAATTTTGAGGGTTGCCAGAATA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACTGTGAAGTAATGAAGGCTGGGAATTTTGAGGGTTGCCAGAATA  894

seq1  TATTTCCTATACAAGTCTTGATTGTGGCATTGTCTTTACAAAGTCTTGTC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCTATACAAGTCTTGATTGTGGCATTGTCTTTACAAAGTCTTGTC  944

seq1  AACCAAACAGTAGCTGAATATCTCTCTAGTATGAATTCCCACAGAGCCTA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAACAGTAGCTGAATATCTCTCTAGTATGAATTCCCACAGAGCCTA  994

seq1  AATATTGAATTACAATGACTATAATTGCACGTGGAAAAATCATTGCTTGG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGAATTACAATGACTATAATTGCACGTGGAAAAATCATTGCTTGG  1044

seq1  AGATTAAAAATGGATGCATTTCAAGAACTTGAATGATTGAGCCTCTGGGA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAAAATGGATGCATTTCAAGAACTTGAATGATTGAGCCTCTGGGA  1094

seq1  TAAAGCTGACAAAGTAGCTCTCCAGAGGCAATAAAAGATAATTTCTTGTG  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTGACAAAGTAGCTCTCCAGAGGCAATAAAAGATAATTTCTTGTG  1144

seq1  TCTTGAGATACGAGCAATTAAAGGATATGGGGAAATATGTCTAGTGAATT  1190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGATACGAGCAATTAAAGGATATGGGGAAATATGTCTAGTGAATT  1194

seq1  C  1191
      |
seq2  C  1195