BAC Information

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BAC

Clone NameB6Ng01-091F23
Chromosome7 (Build37)
Map Location 138,507,392 - 138,688,642
singlet/doubletdoublet
Overlap genePstk, Ikzf5, Acadsb, Hmx3
Upstream geneAte1, LOC100043163, Nsmce4a, Tacc2, LOC619876, Btbd16, EG434249, Plekha1, Htra1, Dmbt1, 4933402N03Rik, 5430419D17Rik, LOC546006, LOC100043173, Cuzd1, 1700007K09Rik, 1700063I17Rik, 2310057M21Rik
Downstream geneHmx2, Bub3, LOC677073, LOC100043679, Gpr26, Cpxm2, 4631426J05Rik, LOC100043682, LOC100043683
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091F23.bB6Ng01-091F23.g
ACCDH903414DH903415
length5871,150
definitionDH903414|Mus musculus domesticus DNA, BAC clone: B6Ng01-091F23, 5' end.DH903415|Mus musculus domesticus DNA, BAC clone: B6Ng01-091F23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(138,688,048 - 138,688,642)(138,507,392 - 138,508,528)
sequence
tccctctctctctctctctctctctctctctctctctctctctctcggga
ttttgaaaatagttcctcagaaaaatgaataaactaaaaaaaaaagttga
atttttcgcttattttccttctgtaaaaatacaccctcagagccacagag
caatggtaatttaaggggagatctgaactttttttttttttaaagaactt
tcaattggaagttttgacctggtaattttgtcgttcccccctgccccacc
ccgttttctctcaatggtaagcaaaaccaaaaataagaggagaagcgcct
caaattcataggaattaattgcacgaaaatgcattgcaaatacttacaaa
atgctattggggggtgggaggcaaggcagtgagcccaaggtcgctggcca
cagcccggcaccctcggcccggcccagtctcctccggggtccccaaaagg
tggccgggtgctcactccctgtcccctgtcccatctcacaccggccttag
taggggcacggacgagaccaccgggtgctagtagttgattgggtgcggga
aggtgagcagcggttggctgactggtaccggggcccc
gaattctatagacagtcaccagagtgtatgtataatgtgttcatcaagtt
tgaaagagaaatcagagattcagtataaacaaaatctagaaacagtaacc
tttaattctaaaaggctcaatttatatttttaaaagaaattccccacatt
ctaagtggtcatcattcttgttctgtttagtatggggagccccctcagag
tgcacaaccaattgaaagtctttattctaggtatagcccctgagtgtcca
gaacatgggattttaagagaccttaaagcgaaggcatctcccttggctgc
tgcatcagagcactacggagtaagcagttttaacagaagctaagatgagc
tgttagccagccaccaaggagggttctgaacaaatgagcaacttagaaga
acagttagctggaggaggttccgcacaaacaagcagtttcaacaaaggct
aagatacgttatcttggccattctgacctttggttcctagagtggagttg
agtagttttccataggattctccagctcaaggagatcagattcagggtaa
acctgaaaccggccggtggcaagaaggcctttgcagtgtcttgccctgtt
actctgtatttccggctcctctggttataaactaggttaatacgtgtaga
cagtcctaatggaagtacactctagaaacactaacttgcaggtttgcgtg
caagattaataataccttgcgggtttttacttccttaaataaggctgatg
aatcagaagactaaaggcacctatcataaaagactcctgccaataaatca
ccgtttctccatcctctcaaaagctcttatcttcatctctgcttgtcatg
tgttgaggcgttaagcttcattctgaactgttttggggagttttctcagc
caacatcttgcgcctgttcttcattaccggccatatcctctgctctgccc
ttctatcccttgtaatgattgttgctgatggctggaaccaacatgaactt
ttacatctagcattcaaagcctggtgaactcaatctcctccctctagaaa
tactatcccttttcaatagttttgagggaaaaagaacatctctcattcac
aggccaagctttaaccgtaactatagaatgggaagcctattcctccggct

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_138688048_138688642
seq2: B6Ng01-091F23.b_50_642 (reverse)

seq1  GGGGCACCGGTGCCAGTCAGCCAGCCGCTGCTCACCTTCCCGCACCCAGT  50
      ||||| ||||| ||||||||||| |||||||||||||||||||||||| |
seq2  GGGGCCCCGGTACCAGTCAGCCAACCGCTGCTCACCTTCCCGCACCCAAT  50

seq1  CTACTACTCGCACCCGGTGGTCTCGTCCGTGCCCCTACTAAGGCCGGTGT  100
      | |||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAACTACTAGCACCCGGTGGTCTCGTCCGTGCCCCTACTAAGGCCGGTGT  100

seq1  GAGATGGGACAGGGGACAGGGAGTGAGCACCCGGCCACCTTTTGGGGACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGGACAGGGGACAGGGAGTGAGCACCCGGCCACCTTTTGGGGACC  150

seq1  CCGGAGGAGACTGGGCCGGGCCGAGGGTGCCGGGCTGTGGCCAGCGACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGAGGAGACTGGGCCGGGCCGAGGGTGCCGGGCTGTGGCCAGCGACCT  200

seq1  TGGGCTCACTGCCTTGCCTCCCACCCCCCAATAGCATTTTGTAAGTATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTCACTGCCTTGCCTCCCACCCCCCAATAGCATTTTGTAAGTATTT  250

seq1  GCAATGCATTTTCGTGCAATTAATTCCTATGAATTTGAGGCGCTTCTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGCATTTTCGTGCAATTAATTCCTATGAATTTGAGGCGCTTCTCCT  300

seq1  CTTATTTTTGGTTTTGCTTACCATTGAGAGAAAACGGGGTGGGGCAGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTTTGGTTTTGCTTACCATTGAGAGAAAACGGGGTGGGGCAGGGG  350

seq1  GGAACGACAAAATTACCAGGTCAAAACTTCCAATTGAAAGTTCTTTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACGACAAAATTACCAGGTCAAAACTTCCAATTGAAAGTTCTTTAAAA  400

seq1  AAAAAAAAAGTTCAGATCTCCCCTTAAATTACCATTGCTCTGTGGCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAGTTCAGATCTCCCCTTAAATTACCATTGCTCTGTGGCTCTG  450

seq1  AGGGTGTATTTTTACAGAAGGAAAATAAGCGAAAAATTCAACTTTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGTATTTTTACAGAAGGAAAATAAGCGAAAAATTCAACTTTTTTTT  500

seq1  TTAGTTTATTCATTTTTCTGAGGAACTATTTTCAAAATCCCGAGAGAGAG  550
      |||||||||||||||||||||||||||||||||||||||||  |||||||
seq2  TTAGTTTATTCATTTTTCTGAGGAACTATTTTCAAAATCCC--GAGAGAG  548

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAATTC  595
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAATTC  593

seq1: chr7_138507392_138508528
seq2: B6Ng01-091F23.g_70_1219

seq1  GAATTCTATAGACAGTCACCAGAGTGTATGTATAATGTGTTCATCAAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAGACAGTCACCAGAGTGTATGTATAATGTGTTCATCAAGTT  50

seq1  TGAAAGAGAAATCAGAGATTCAGTATAAACAAAATCTAGAAACAGTAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAGAAATCAGAGATTCAGTATAAACAAAATCTAGAAACAGTAACC  100

seq1  TTTAATTCTAAAAGGCTCAATTTATATTTTTAAAAGAAATTCCCCACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTCTAAAAGGCTCAATTTATATTTTTAAAAGAAATTCCCCACATT  150

seq1  CTAAGTGGTCATCATTCTTGTTCTGTTTAGTATGGGGAGCCCCCTCAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGGTCATCATTCTTGTTCTGTTTAGTATGGGGAGCCCCCTCAGAG  200

seq1  TGCACAACCAATTGAAAGTCTTTATTCTAGGTATAGCCCCTGAGTGTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAACCAATTGAAAGTCTTTATTCTAGGTATAGCCCCTGAGTGTCCA  250

seq1  GAACATGGGATTTTAAGAGACCTTAAAGCGAAGGCATCTCCCTTGGCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGGGATTTTAAGAGACCTTAAAGCGAAGGCATCTCCCTTGGCTGC  300

seq1  TGCATCAGAGCACTACGGAGTAAGCAGTTTTAACAGAAGCTAAGATGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCAGAGCACTACGGAGTAAGCAGTTTTAACAGAAGCTAAGATGAGC  350

seq1  TGTTAGCCAGCCACCAAGGAGGGTTCTGAACAAATGAGCAACTTAGAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGCCAGCCACCAAGGAGGGTTCTGAACAAATGAGCAACTTAGAAGA  400

seq1  ACAGTTAGCTGGAGGAGGTTCCGCACAAACAAGCAGTTTCAACAAAGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTAGCTGGAGGAGGTTCCGCACAAACAAGCAGTTTCAACAAAGGCT  450

seq1  AAGATACGTTATCTTGGCCATTCTGACCTTTGGTTCCTAGAGTGGAGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATACGTTATCTTGGCCATTCTGACCTTTGGTTCCTAGAGTGGAGTTG  500

seq1  AGTAGTTTTCCATAGGATTCTCCAGCTCAAGGAGATCAGATTCAGGGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTTTCCATAGGATTCTCCAGCTCAAGGAGATCAGATTCAGGGTAA  550

seq1  ACCTGAAACCGGCCGGTGGCAAGAAGGCCTTTGCAGTGTCTTGCCCTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAAACCGGCCGGTGGCAAGAAGGCCTTTGCAGTGTCTTGCCCTGTT  600

seq1  ACTCTGTATTTCCGGCTCCTCTGGTTATAAACTAGGTTAATACGTGTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTATTTCCGGCTCCTCTGGTTATAAACTAGGTTAATACGTGTAGA  650

seq1  CAGTCCTAATGGAAGTACACTCTAGAAACACTAACTTGCAGGTTTGCGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTAATGGAAGTACACTCTAGAAACACTAACTTGCAGGTTTGCGTG  700

seq1  CAAGATTAATAATACCTTGCGGGTTTTTACTTCCTTAAATAAGGCTGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATTAATAATACCTTGCGGGTTTTTACTTCCTTAAATAAGGCTGATG  750

seq1  AATCAGAAGACTAAAGGCACCTATCATAAAAGACTCCTGCCAATAAATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGAAGACTAAAGGCACCTATCATAAAAGACTCCTGCCAATAAATCA  800

seq1  CCGTTTCTCCATCCTCTCAAAAGCTCTTATCTTCATCTCTGCTTGTCATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTTCTCCATCCTCTCAAAAGCTCTTATCTTCATCTCTGCTTGTCATG  850

seq1  TGTTGAGGCGTT-AGCTTCA-TCTGAACTGTTCT-GGGAG-TTTCTCAGC  896
      |||||||||||| ||||||| ||||||||||| | ||||| |||||||||
seq2  TGTTGAGGCGTTAAGCTTCATTCTGAACTGTTTTGGGGAGTTTTCTCAGC  900

seq1  CAACATCTTGCGCCTGTTC-TCATTACC-GCCATATCCTCTGCTCTGCCC  944
      ||||||||||||||||||| |||||||| |||||||||||||||||||||
seq2  CAACATCTTGCGCCTGTTCTTCATTACCGGCCATATCCTCTGCTCTGCCC  950

seq1  -TCTATCCCTTGTAATGATTGTTGCTGATGGCTGG-ACCAACATG-ACCT  991
       |||||||||||||||||||||||||||||||||| ||||||||| || |
seq2  TTCTATCCCTTGTAATGATTGTTGCTGATGGCTGGAACCAACATGAACTT  1000

seq1  TTACATCTTAGCATTCAAAGCCTGGTGAACTCAATCTCCTCCCCCTAG-A  1040
      ||||||| ||||||||||||||||||||||||||||||||||| |||| |
seq2  TTACATC-TAGCATTCAAAGCCTGGTGAACTCAATCTCCTCCCTCTAGAA  1049

seq1  ATACTATCCCTTTTCAATAGTTTTG-GAGGAAAAGAACAACCTCTCATTC  1089
      ||||||||||||||||||||||||| | | |||||||| | |||||||||
seq2  ATACTATCCCTTTTCAATAGTTTTGAGGGAAAAAGAAC-ATCTCTCATTC  1098

seq1  ACA-GCCAAGCTTAAACCCGTACTATAGAAT-GGAAG-CGATTCCT-CGG  1135
      ||| ||||||||| ||||   |||||||||| ||||| | |||||| |||
seq2  ACAGGCCAAGCTTTAACCGTAACTATAGAATGGGAAGCCTATTCCTCCGG  1148

seq1  CT  1137
      ||
seq2  CT  1150