BAC Information

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BAC

Clone NameB6Ng01-091O05
Chromosome7 (Build37)
Map Location 48,818,986 - 48,964,559
singlet/doubletdoublet
Overlap gene2610021A01Rik, 2810426N06Rik, LOC668576, Gprc2a-rs5, LOC628372, EG668579
Upstream geneLOC100039094, 2900093B09Rik, 4930433I11Rik, EG233164, LOC668555, EG627987, LOC100039269, LOC545955, EG628304, LOC668561, EG434172, LOC100039221, LOC668565, AI987944, EG269902, LOC100039375, EG628359
Downstream geneEG628403, EG628422, Gprc2a-rs1, EG628444, EG434174, EG637913, EG434175, LOC100039556, EG637898, Gprc2a-rs2, LOC434177, Vmn2r-ps60, 4933421I07Rik, LOC628503, BC063263, LOC100039449, EG637776, C330019L16Rik, EG434179
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091O05.bB6Ng01-091O05.g
ACCDH903796DH903797
length505988
definitionDH903796|Mus musculus domesticus DNA, BAC clone: B6Ng01-091O05, 5' end.DH903797|Mus musculus domesticus DNA, BAC clone: B6Ng01-091O05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(48,818,986 - 48,819,496)(48,963,573 - 48,964,559)
sequence
actgaacatgttgtattttgggataaccatgtagggagctcatccttgga
tgaggctgcttttcccacttgcaagagacctcaactccttaatgaagaac
aggatgttggggacaaaggtccttgtacccacaaatcaccagggaaacca
caaatcttaaatttccagaagcctgcacacagtgaagaaaataagaaacc
tgcattcagggctggtgagatggctcagtgggtaagagcacctgactgct
cttctgaaggtccagagttcaaatcccagcaaccacatggtggctcacaa
ctatccgtaacgagatctgactccctcttctggagtgtctgaagacagct
acaatgtacttccatataataaataaataaatctttaaaaaaaaaaaaag
aaacctacattcaaccttaaatgctggaggtggattttcttgtttttctt
ttttttttcttcctttctttttttttttttgtttgtttggttggttggtt
ggttt
gaattccagggctagaaagtgggattggtgagcagggggaggggatagag
gatagaggggttttagaggggaaaccaggaaaggagatatcatttgaaat
gtaaataaagaaaatatataataaaagaaggaaaaacatgttttgaataa
ctgtgctcctacagatttgtgaattttacactgaattttaaaaatgtgcc
ccttagtttataatgtcataattctattatgttaaacttttgtgtatttc
taaaaaatatcacctcattaagagattgttgtctatgttttatattttga
gctaacacttatcgagtctatttacagaaaaatcaaatatctcctttgat
accttgggggttttttttccttgataaccatggaactttattcatttttt
tcttaatctgtttacacattcacaactcctcctctgcttctaatatgagc
attttggtgttgtgtttttattgtacaatgtatgcttcaagagtagaatt
ctatctttcacttaattaaggaacatgatgtctgtttcattaactaattt
atttaaggataacaccttattttaaaattaagttttgcttattctacggt
catgcattagtgatatcttgaattttaaattgttatcatgtatgtttgca
ccctatcttgcttcaaaatatagtcactaaaatcaaattatttttgtatc
cacgactgaggttctcctatttggtacatactaaaaatagctgtggatat
accatatagcttaagagcagggaagagttattttaccataggagtatttc
atatatggtatttatgaacccacataaaattttcatagtggtagaaattc
atatcacataaggatgaactcagttgttgccactagcttgatcaaacacc
atgggaaatgtttgatttattgtcagcaacaagtgacatgctcatcttta
ctgacatagcttatctaacagtgatcttgtgatgaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_48818986_48819496
seq2: B6Ng01-091O05.b_48_558

seq1  GAATTCACTGAACATGTTGTATTTTGGGATAACCATGTAGGGAGCTCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGAACATGTTGTATTTTGGGATAACCATGTAGGGAGCTCATC  50

seq1  CTTGGATGAGGCTGCTTTTCCCACTTGCAAGAGACCTCAACTCCTTAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGATGAGGCTGCTTTTCCCACTTGCAAGAGACCTCAACTCCTTAATG  100

seq1  AAGAACAGGATGTTGGGGACAAAGGTCCTTGTACCCACAAATCACCAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAGGATGTTGGGGACAAAGGTCCTTGTACCCACAAATCACCAGGG  150

seq1  AAACCACAAATCTTAAATTTCCAGAAGCCTGCACACAGTGAAGAAAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACAAATCTTAAATTTCCAGAAGCCTGCACACAGTGAAGAAAATAA  200

seq1  GAAACCTGCATTCAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCTGCATTCAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTG  250

seq1  ACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTCTTCTGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGC  300

seq1  TCACAACTATCCGTAACGAGATCTGACTCCCTCTTCTGGAGTGTCTGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACTATCCGTAACGAGATCTGACTCCCTCTTCTGGAGTGTCTGAAG  350

seq1  ACAGCTACAATGTACTTCCATATAATAAATAAATAAATCTTTAAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTACAATGTACTTCCATATAATAAATAAATAAATCTTTAAAAAAAA  400

seq1  AAAAAGAAACCTACATTCAACCTTAAATGCTGGAGGTGGATTTTCTTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAACCTACATTCAACCTTAAATGCTGGAGGTGGATTTTCTTGTT  450

seq1  TTTCTTTTTTTTTTCTTCCTTTCTTTTTTTTTTTTTGTTTGTTTGGTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTTTTTTCTTCCTTTCTTTTTTTTTTTTTGTTTGTTTGGTTGG  500

seq1  TTGGTTGGTTT  511
      |||||||||||
seq2  TTGGTTGGTTT  511

seq1: chr7_48963573_48964559
seq2: B6Ng01-091O05.g_68_1054 (reverse)

seq1  CTTCATCAC-AGATCACTGTTAAGATAGGCTATGTTCAGTAAAGATGAGC  49
      ||||||||| ||||||||||| ||||| |||||| |||||||||||||||
seq2  CTTCATCACAAGATCACTGTT-AGATAAGCTATG-TCAGTAAAGATGAGC  48

seq1  ATGTCACTTGTTGCTGTACATAAAATCAAACATTT-CCATGGTGATTTGA  98
      |||||||||||||||| |||  ||||||||||||| |||||||| |||||
seq2  ATGTCACTTGTTGCTG-ACAATAAATCAAACATTTCCCATGGTG-TTTGA  96

seq1  TCAAGCTTAGTGGCAAC-ACTGAGTTCATCCTTATGTGATATGAATTTCT  147
      |||||| |||||||||| ||||||||||||||||||||||||||||||||
seq2  TCAAGC-TAGTGGCAACAACTGAGTTCATCCTTATGTGATATGAATTTCT  145

seq1  ACCACTATG-AAATTTTATGTGGGTTCAT-AATACCATATATGAAATACT  195
      ||||||||| ||||||||||||||||||| ||||||||||||||||||||
seq2  ACCACTATGAAAATTTTATGTGGGTTCATAAATACCATATATGAAATACT  195

seq1  CCTATGGTAAAATAACTCTTCCCTGCTCTTAAGCTATATGGTATATCCAC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGGTAAAATAACTCTTCCCTGCTCTTAAGCTATATGGTATATCCAC  245

seq1  AGCTATTTTTAGTATGTACCAAATAGGAGAACCTCAGTCGTGGATACAAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATTTTTAGTATGTACCAAATAGGAGAACCTCAGTCGTGGATACAAA  295

seq1  AATAATTTGATTTTAGTGACTATATTTTGAAGCAAGATAGGGTGCAAACA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTTGATTTTAGTGACTATATTTTGAAGCAAGATAGGGTGCAAACA  345

seq1  TACATGATAACAATTTAAAATTCAAGATATCACTAATGCATGACCGTAGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGATAACAATTTAAAATTCAAGATATCACTAATGCATGACCGTAGA  395

seq1  ATAAGCAAAACTTAATTTTAAAATAAGGTGTTATCCTTAAATAAATTAGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCAAAACTTAATTTTAAAATAAGGTGTTATCCTTAAATAAATTAGT  445

seq1  TAATGAAACAGACATCATGTTCCTTAATTAAGTGAAAGATAGAATTCTAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAACAGACATCATGTTCCTTAATTAAGTGAAAGATAGAATTCTAC  495

seq1  TCTTGAAGCATACATTGTACAATAAAAACACAACACCAAAATGCTCATAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAAGCATACATTGTACAATAAAAACACAACACCAAAATGCTCATAT  545

seq1  TAGAAGCAGAGGAGGAGTTGTGAATGTGTAAACAGATTAAGAAAAAAATG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCAGAGGAGGAGTTGTGAATGTGTAAACAGATTAAGAAAAAAATG  595

seq1  AATAAAGTTCCATGGTTATCAAGGAAAAAAAACCCCCAAGGTATCAAAGG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGTTCCATGGTTATCAAGGAAAAAAAACCCCCAAGGTATCAAAGG  645

seq1  AGATATTTGATTTTTCTGTAAATAGACTCGATAAGTGTTAGCTCAAAATA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTGATTTTTCTGTAAATAGACTCGATAAGTGTTAGCTCAAAATA  695

seq1  TAAAACATAGACAACAATCTCTTAATGAGGTGATATTTTTTAGAAATACA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACATAGACAACAATCTCTTAATGAGGTGATATTTTTTAGAAATACA  745

seq1  CAAAAGTTTAACATAATAGAATTATGACATTATAAACTAAGGGGCACATT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTTTAACATAATAGAATTATGACATTATAAACTAAGGGGCACATT  795

seq1  TTTAAAATTCAGTGTAAAATTCACAAATCTGTAGGAGCACAGTTATTCAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATTCAGTGTAAAATTCACAAATCTGTAGGAGCACAGTTATTCAA  845

seq1  AACATGTTTTTCCTTCTTTTATTATATATTTTCTTTATTTACATTTCAAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTTTTTCCTTCTTTTATTATATATTTTCTTTATTTACATTTCAAA  895

seq1  TGATATCTCCTTTCCTGGTTTCCCCTCTAAAACCCCTCTATCCTCTATCC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATCTCCTTTCCTGGTTTCCCCTCTAAAACCCCTCTATCCTCTATCC  945

seq1  CCTCCCCCTGCTCACCAATCCCACTTTCTAGCCCTGGAATTC  987
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCCTGCTCACCAATCCCACTTTCTAGCCCTGGAATTC  987