BAC Information

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BAC

Clone NameB6Ng01-095E16
Chromosome7 (Build37)2 (Build37)
Map Location 58,337,991 - 58,338,295150,736,450 - 150,737,186
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneNell1, 4933405O20Rik, EG668766, EG668767, EG668768, EG638046, EG668770, EG668774
Downstream geneLOC668776, LOC434186, LOC546971, LOC668779, Tmem16e, Slc17a6, EG620599, LOC654473, LOC100040608, Gas2, 1700015G11Rik, EG668783
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095E16.bB6Ng01-095E16.g
ACCDH906273DH906274
length609770
definitionDH906273|Mus musculus domesticus DNA, BAC clone: B6Ng01-095E16, 5' end.DH906274|Mus musculus domesticus DNA, BAC clone: B6Ng01-095E16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(58,337,991 - 58,338,295)(150,736,450 - 150,737,186)
sequence
gaattccaacatctgcaaagtgggtcacaagagggaagaagcccagttct
gcagacggtctgagttgtgtgattgattcaggacagctgtaacaggagag
agagagacacctgaacagatagatttaacaacccaagggaaatccattta
atgaatatgagccttaaggtaagaaacctgcaaaatcttgctggcgtatg
caatggtgttagggattggaggctgattatgggatggatccccagatgtg
gcagtctctagatggtccatcctttcgcctcagctccaaactttgtctct
gctgacatcattgcatacgcaagattttgctgaaaggaccctgatatagc
tgtctcttgtgaggctatgctggtgcctggtaaacacagaaatggatgct
cacagtcagctattggatggaacacaggacccccaatggaggagctagag
aaagtacccaaggagctataggggtctgcagccctataggtggaacaaca
atatgaactaacaagtacccccagaactcatgtctctagctgcatatgta
gcagaagatggcctagttggccatcattgggaagagaggcccttggtctt
gcaaacttt
gaattctcctggaactgacggttatagacagttatgaatcaccatatggg
tgctagatgtgtcgaacctgggtccggttaaaggagcaaccagtgccctt
aatcactgagccatctctccagcccctattgcacttttctttctttcttt
ctttctttctttctttctttctttctttctttctttctttctttctttct
taatcactgagccatctctccagcccctattgcacttttctttctttctt
tctttctttctttctttctttctttcttccttccttccttccttccttcc
tttctttctttctttctttctttctttctttctttctagacttatttatt
tattttacatatgtgactacactgatgctgtcttcagacatacagaagaa
ggcatcagattccattacagatggttgtgagccaccatgtggttcctggg
aattgagctcaggacctctagaagagcagacagtgctcttaatctctgag
ccaatccctccagcccctattgcacttttccaatggctatttgttttatc
ttttaaaaatacacatacaaatataaacttgaccgttttaacttagtgta
tgtgcagtactaattacatccacattgttttcaaaccttcctcactcttt
ccaaacccatttcattactccagcagaaactttgtcactggtgagtagca
ctgccatcccctttctcacaggtctgatcatcactttctgtaattattac
tatgtgggtggtgacaacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_58337991_58338295
seq2: B6Ng01-095E16.b_355_655

seq1  CATTGCATACACTAGCACGATTTTGCTGAAAGGACCCAGATATAGCTGTC  50
      ||||||||||    ||| ||||||||||||||||||| ||||||||||||
seq2  CATTGCATAC----GCAAGATTTTGCTGAAAGGACCCTGATATAGCTGTC  46

seq1  TCTTGTGAGGCTATGCAGGGGCCTAGCAAACACAGAAGTGGATGCTCACA  100
      |||||||||||||||| || |||| | |||||||||| ||||||||||||
seq2  TCTTGTGAGGCTATGCTGGTGCCTGGTAAACACAGAAATGGATGCTCACA  96

seq1  GTCAGCTATTGGATGGATCACAGGGCTCCCAATGGAGGAGCTAGAGAAAA  150
      ||||||||||||||||| |||||| | |||||||||||||||||||||| 
seq2  GTCAGCTATTGGATGGAACACAGGACCCCCAATGGAGGAGCTAGAGAAAG  146

seq1  TACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGCTGGAACAACAATAT  200
      |||||||||||||| |||| |||||| |||||||| ||||||||||||||
seq2  TACCCAAGGAGCTATAGGGGTCTGCAGCCCTATAGGTGGAACAACAATAT  196

seq1  GAACTAACCAATA-CCTCGGAGCTCTTGACACTAGCTGCATATGTATCAG  249
      |||||||| | || || | || ||| || | ||||||||||||||| |||
seq2  GAACTAACAAGTACCCCCAGAACTCATGTCTCTAGCTGCATATGTAGCAG  246

seq1  AAGATGGCCTAGTAGGCCATCATTGGAGAGAGAGGCCTATTGGTCTTGCA  299
      ||||||||||||| ||||||||||||  |||||||||  |||||||||||
seq2  AAGATGGCCTAGTTGGCCATCATTGGGAAGAGAGGCC-CTTGGTCTTGCA  295

seq1  AACTTT  305
      ||||||
seq2  AACTTT  301

seq1: chr2_150736450_150737186
seq2: B6Ng01-095E16.g_89_837

seq1  TTATAGACAGTTATGAATCACCATATGGGTGCTAGATGTGTCGAACCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGACAGTTATGAATCACCATATGGGTGCTAGATGTGTCGAACCTGG  50

seq1  GTCCGGTTAAAGGAGCAACCAGTGCCCTTAATCACTGAGCCATCTCTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCGGTTAAAGGAGCAACCAGTGCCCTTAATCACTGAGCCATCTCTCCA  100

seq1  GCCCCTATTGCACT------------------------TTTCTTTCTTTC  126
      ||||||||||||||                        ||||||||||||
seq2  GCCCCTATTGCACTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  150

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTAATCACTGAGCCATCTCTCC  176
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTAATCACTGAGCCATCTCTCC  200

seq1  AGCCCCTATTGCACTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  226
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCTATTGCACTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  250

seq1  CTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCT  276
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCT  300

seq1  TTCTTTCTTTCTTTCTAGACTTATTTATTTATTTTACATATGTGACTACA  326
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTAGACTTATTTATTTATTTTACATATGTGACTACA  350

seq1  CTGATGCTGTCTTCAGACATACAGAAGAAGGCATCAGATTCCATTACAGA  376
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGCTGTCTTCAGACATACAGAAGAAGGCATCAGATTCCATTACAGA  400

seq1  TGGTTGTGAGCCACCATGTGGTTCCTGGGAATTGAGCTCAGGACCTCTAG  426
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTGAGCCACCATGTGGTTCCTGGGAATTGAGCTCAGGACCTCTAG  450

seq1  AAGAGCAGACAGTGCTCTTAATCTCTGAGCCAATCCCTCCAGCCCCTATT  476
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAGACAGTGCTCTTAATCTCTGAGCCAATCCCTCCAGCCCCTATT  500

seq1  GCACTTTTCCAATGGCTATTTGTTTTATCTTTTAAAAATACACATACAAA  526
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTTTCCAATGGCTATTTGTTTTATCTTTTAAAAATACACATACAAA  550

seq1  TATAAACTTGACCGTTTTAACTTAGTGTATGTGCAGTACTAATTACATCC  576
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACTTGACCGTTTTAACTTAGTGTATGTGCAGTACTAATTACATCC  600

seq1  ACATTGTTTTCAAACCTTCCTCACTCTTTCCAAACCCATTTCATTACTCC  626
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTTTTCAAACCTTCCTCACTCTTTCCAAACCCATTTCATTACTCC  650

seq1  AGCAGAAACTTTGTCACTGTTGAGTAGCACTGCCCAGTCCCCCTTTTCTC  676
      ||||||||||||||||||| ||||||||||||||   |||||  ||||||
seq2  AGCAGAAACTTTGTCACTGGTGAGTAGCACTGCC--ATCCCC--TTTCTC  696

seq1  ACAGGTCCTGATCATCACTTTTCTGTTATATTTATTTACTTATGTGGGTT  726
      |||||| ||||||||||| ||||||   || ||| |||| ||||||||| 
seq2  ACAGGT-CTGATCATCAC-TTTCTG---TAATTA-TTAC-TATGTGGGTG  739

seq1  GTGACATACCA  737
      |||||| ||||
seq2  GTGACA-ACCA  749